RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
RNU1-54P-201ENST00000517181 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
RNU1-54P-201ENST00000517181 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
RNU1-54P-201ENST00000517181 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
RNU1-54P-201ENST00000517181 FOXD1Q16676 465 aa13.95□□□□□ -0.18
RNU1-54P-201ENST00000517181 PLPPR3Q6T4P5 718 aa13.73□□□□□ -0.21
RNU1-54P-201ENST00000517181 PPP6R1Q9UPN7 881 aa13.28□□□□□ -0.28
RNU1-54P-201ENST00000517181 ADRA2BP18089 450 aa13.21□□□□□ -0.29
RNU1-54P-201ENST00000517181 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
RNU1-54P-201ENST00000517181 MSH5O43196 834 aa12.91□□□□□ -0.34
RNU1-54P-201ENST00000517181 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
RNU1-54P-201ENST00000517181 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
RNU1-54P-201ENST00000517181 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
RNU1-54P-201ENST00000517181 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
RNU1-54P-201ENST00000517181 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
RNU1-54P-201ENST00000517181 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
RNU1-54P-201ENST00000517181 HOXD11P31277 338 aaPredicted RBP11.66□□□□□ -0.54
RNU1-54P-201ENST00000517181 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
RNU1-54P-201ENST00000517181 RNF216Q9NWF9 866 aaPredicted RBP11.62□□□□□ -0.55
RNU1-54P-201ENST00000517181 KCNA4P22459 653 aa11.58□□□□□ -0.56
RNU1-54P-201ENST00000517181 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
RNU1-54P-201ENST00000517181 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
RNU1-54P-201ENST00000517181 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
RNU1-54P-201ENST00000517181 RNF39Q9H2S5 420 aa11.09□□□□□ -0.63
RNU1-54P-201ENST00000517181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNU1-54P-201ENST00000517181 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
RNU1-54P-201ENST00000517181 SLC4A1APQ9BWU0 796 aaKnown RBP10.96□□□□□ -0.65
RNU1-54P-201ENST00000517181 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
RNU1-54P-201ENST00000517181 U3KPZ7 1027 aaPredicted RBP10.88□□□□□ -0.67
RNU1-54P-201ENST00000517181 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
RNU1-54P-201ENST00000517181 ZBTB22O15209 634 aa10.7□□□□□ -0.7
RNU1-54P-201ENST00000517181 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
RNU1-54P-201ENST00000517181 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
RNU1-54P-201ENST00000517181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
RNU1-54P-201ENST00000517181 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
RNU1-54P-201ENST00000517181 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
RNU1-54P-201ENST00000517181 SAMD1Q6SPF0 538 aaPredicted RBP10.59□□□□□ -0.71
RNU1-54P-201ENST00000517181 APLP2Q06481 763 aa10.54□□□□□ -0.72
RNU1-54P-201ENST00000517181 CAPN15O75808 1086 aa10.51□□□□□ -0.73
RNU1-54P-201ENST00000517181 DSG3P32926 999 aa10.46□□□□□ -0.73
RNU1-54P-201ENST00000517181 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
RNU1-54P-201ENST00000517181 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
RNU1-54P-201ENST00000517181 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
RNU1-54P-201ENST00000517181 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.74
RNU1-54P-201ENST00000517181 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
RNU1-54P-201ENST00000517181 EHMT2Q96KQ7 1210 aa10.37□□□□□ -0.75
RNU1-54P-201ENST00000517181 ABCB7O75027 752 aa10.3□□□□□ -0.76
RNU1-54P-201ENST00000517181 POLA2Q14181 598 aa10.24□□□□□ -0.77
RNU1-54P-201ENST00000517181 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
RNU1-54P-201ENST00000517181 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
RNU1-54P-201ENST00000517181 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
RNU1-54P-201ENST00000517181 FBLN2P98095 1184 aa9.91□□□□□ -0.82
RNU1-54P-201ENST00000517181 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
RNU1-54P-201ENST00000517181 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
RNU1-54P-201ENST00000517181 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
RNU1-54P-201ENST00000517181 SPDYE2Q495Y8 402 aa9.8□□□□□ -0.84
RNU1-54P-201ENST00000517181 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
RNU1-54P-201ENST00000517181 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
RNU1-54P-201ENST00000517181 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
RNU1-54P-201ENST00000517181 ZNF692Q9BU19 519 aaPredicted RBP9.68□□□□□ -0.86
RNU1-54P-201ENST00000517181 CHRDL2Q6WN34 429 aa9.62□□□□□ -0.87
RNU1-54P-201ENST00000517181 PITPNM1O00562 1244 aa9.6□□□□□ -0.87
RNU1-54P-201ENST00000517181 SPDYE4A6NLX3 237 aa9.58□□□□□ -0.88
RNU1-54P-201ENST00000517181 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
RNU1-54P-201ENST00000517181 POTEHQ6S545 545 aa9.53□□□□□ -0.88
RNU1-54P-201ENST00000517181 PROM2Q8N271 834 aa9.52□□□□□ -0.89
RNU1-54P-201ENST00000517181 SPDYE1Q8NFV5 336 aaPredicted RBP9.52□□□□□ -0.89
RNU1-54P-201ENST00000517181 FXR2P51116 673 aaKnown RBP eCLIP9.48□□□□□ -0.89
RNU1-54P-201ENST00000517181 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
RNU1-54P-201ENST00000517181 CLEC11AQ9Y240 323 aa9.43□□□□□ -0.9
RNU1-54P-201ENST00000517181 FKBP8Q14318 412 aa9.38□□□□□ -0.91
RNU1-54P-201ENST00000517181 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
RNU1-54P-201ENST00000517181 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
RNU1-54P-201ENST00000517181 PRKAR2AP13861 404 aaKnown RBP9.31□□□□□ -0.92
RNU1-54P-201ENST00000517181 CHADLQ6NUI6 762 aa9.27□□□□□ -0.93
RNU1-54P-201ENST00000517181 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
RNU1-54P-201ENST00000517181 MNX1P50219 401 aaPredicted RBP9.19□□□□□ -0.94
RNU1-54P-201ENST00000517181 FARP1Q9Y4F1 1045 aaPredicted RBP9.19□□□□□ -0.94
RNU1-54P-201ENST00000517181 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
RNU1-54P-201ENST00000517181 HAX1O00165 279 aa9.14□□□□□ -0.95
RNU1-54P-201ENST00000517181 EVX2Q03828 476 aa9.13□□□□□ -0.95
RNU1-54P-201ENST00000517181 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
RNU1-54P-201ENST00000517181 SP7Q8TDD2 431 aaPredicted RBP9.08□□□□□ -0.96
RNU1-54P-201ENST00000517181 MIER1Q8N108 512 aa9.06□□□□□ -0.96
RNU1-54P-201ENST00000517181 CD44P16070 742 aaKnown RBP9.04□□□□□ -0.96
RNU1-54P-201ENST00000517181 NPM1P06748 294 aaKnown RBP eCLIP9.03□□□□□ -0.96
RNU1-54P-201ENST00000517181 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.97
RNU1-54P-201ENST00000517181 PLCD3Q8N3E9 789 aa9.02□□□□□ -0.97
RNU1-54P-201ENST00000517181 PLEKHG5O94827 1062 aa9□□□□□ -0.97
RNU1-54P-201ENST00000517181 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
RNU1-54P-201ENST00000517181 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
RNU1-54P-201ENST00000517181 NUBP1P53384 320 aa8.94□□□□□ -0.98
RNU1-54P-201ENST00000517181 ZRANB1Q9UGI0 708 aa8.94□□□□□ -0.98
RNU1-54P-201ENST00000517181 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
RNU1-54P-201ENST00000517181 GABBR2O75899 941 aa8.92□□□□□ -0.98
RNU1-54P-201ENST00000517181 CLCN6P51797 869 aa8.91□□□□□ -0.98
RNU1-54P-201ENST00000517181 PAK3O75914 559 aaPredicted RBP8.9□□□□□ -0.98
RNU1-54P-201ENST00000517181 IFNLR1Q8IU57 520 aaPredicted RBP8.9□□□□□ -0.98
RNU1-54P-201ENST00000517181 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
RNU1-54P-201ENST00000517181 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms