RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
RNU6-1271P-201ENST00000517049 CHIC1Q5VXU3 224 aa20.68■□□□□ 0.9
RNU6-1271P-201ENST00000517049 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
RNU6-1271P-201ENST00000517049 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
RNU6-1271P-201ENST00000517049 FOXD1Q16676 465 aa17.69■□□□□ 0.42
RNU6-1271P-201ENST00000517049 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
RNU6-1271P-201ENST00000517049 MSH5O43196 834 aa16.73■□□□□ 0.27
RNU6-1271P-201ENST00000517049 PIAS4Q8N2W9 510 aaPredicted RBP16.42■□□□□ 0.22
RNU6-1271P-201ENST00000517049 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
RNU6-1271P-201ENST00000517049 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
RNU6-1271P-201ENST00000517049 ADRA2BP18089 450 aa16.14■□□□□ 0.17
RNU6-1271P-201ENST00000517049 DMRT2Q9Y5R5 561 aa14.97□□□□□ -0.01
RNU6-1271P-201ENST00000517049 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
RNU6-1271P-201ENST00000517049 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
RNU6-1271P-201ENST00000517049 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
RNU6-1271P-201ENST00000517049 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
RNU6-1271P-201ENST00000517049 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
RNU6-1271P-201ENST00000517049 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
RNU6-1271P-201ENST00000517049 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
RNU6-1271P-201ENST00000517049 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
RNU6-1271P-201ENST00000517049 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
RNU6-1271P-201ENST00000517049 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.17
RNU6-1271P-201ENST00000517049 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
RNU6-1271P-201ENST00000517049 NCBP3Q53F19 620 aaKnown RBP13.58□□□□□ -0.24
RNU6-1271P-201ENST00000517049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNU6-1271P-201ENST00000517049 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
RNU6-1271P-201ENST00000517049 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
RNU6-1271P-201ENST00000517049 POTEHQ6S545 545 aa13.22□□□□□ -0.29
RNU6-1271P-201ENST00000517049 DSG3P32926 999 aa13.2□□□□□ -0.3
RNU6-1271P-201ENST00000517049 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
RNU6-1271P-201ENST00000517049 CAPN15O75808 1086 aa13.13□□□□□ -0.31
RNU6-1271P-201ENST00000517049 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
RNU6-1271P-201ENST00000517049 APLP2Q06481 763 aa12.85□□□□□ -0.35
RNU6-1271P-201ENST00000517049 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
RNU6-1271P-201ENST00000517049 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
RNU6-1271P-201ENST00000517049 ABCB7O75027 752 aa12.78□□□□□ -0.36
RNU6-1271P-201ENST00000517049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
RNU6-1271P-201ENST00000517049 KCNA4P22459 653 aa12.75□□□□□ -0.37
RNU6-1271P-201ENST00000517049 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
RNU6-1271P-201ENST00000517049 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
RNU6-1271P-201ENST00000517049 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
RNU6-1271P-201ENST00000517049 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
RNU6-1271P-201ENST00000517049 POLA2Q14181 598 aa12.41□□□□□ -0.42
RNU6-1271P-201ENST00000517049 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
RNU6-1271P-201ENST00000517049 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
RNU6-1271P-201ENST00000517049 SP7Q8TDD2 431 aaPredicted RBP12.22□□□□□ -0.45
RNU6-1271P-201ENST00000517049 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
RNU6-1271P-201ENST00000517049 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
RNU6-1271P-201ENST00000517049 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
RNU6-1271P-201ENST00000517049 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
RNU6-1271P-201ENST00000517049 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
RNU6-1271P-201ENST00000517049 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
RNU6-1271P-201ENST00000517049 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
RNU6-1271P-201ENST00000517049 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
RNU6-1271P-201ENST00000517049 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
RNU6-1271P-201ENST00000517049 HAX1O00165 279 aa11.94□□□□□ -0.5
RNU6-1271P-201ENST00000517049 EVX2Q03828 476 aa11.79□□□□□ -0.52
RNU6-1271P-201ENST00000517049 SPDYE2BA6NHP3 402 aa11.75□□□□□ -0.53
RNU6-1271P-201ENST00000517049 SPDYE6P0CI01 402 aa11.75□□□□□ -0.53
RNU6-1271P-201ENST00000517049 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
RNU6-1271P-201ENST00000517049 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
RNU6-1271P-201ENST00000517049 ZBTB22O15209 634 aa11.72□□□□□ -0.53
RNU6-1271P-201ENST00000517049 FBLN2P98095 1184 aa11.67□□□□□ -0.54
RNU6-1271P-201ENST00000517049 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
RNU6-1271P-201ENST00000517049 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
RNU6-1271P-201ENST00000517049 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
RNU6-1271P-201ENST00000517049 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
RNU6-1271P-201ENST00000517049 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
RNU6-1271P-201ENST00000517049 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
RNU6-1271P-201ENST00000517049 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
RNU6-1271P-201ENST00000517049 GABBR2O75899 941 aa11.51□□□□□ -0.57
RNU6-1271P-201ENST00000517049 LHX8Q68G74 356 aa11.44□□□□□ -0.58
RNU6-1271P-201ENST00000517049 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
RNU6-1271P-201ENST00000517049 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
RNU6-1271P-201ENST00000517049 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
RNU6-1271P-201ENST00000517049 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
RNU6-1271P-201ENST00000517049 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
RNU6-1271P-201ENST00000517049 CLCN6P51797 869 aa11.25□□□□□ -0.61
RNU6-1271P-201ENST00000517049 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
RNU6-1271P-201ENST00000517049 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
RNU6-1271P-201ENST00000517049 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
RNU6-1271P-201ENST00000517049 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
RNU6-1271P-201ENST00000517049 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
RNU6-1271P-201ENST00000517049 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
RNU6-1271P-201ENST00000517049 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
RNU6-1271P-201ENST00000517049 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1271P-201ENST00000517049 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
RNU6-1271P-201ENST00000517049 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
RNU6-1271P-201ENST00000517049 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
RNU6-1271P-201ENST00000517049 CSRNP3Q8WYN3 585 aa10.83□□□□□ -0.68
RNU6-1271P-201ENST00000517049 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
RNU6-1271P-201ENST00000517049 POTEMA6NI47 508 aa10.79□□□□□ -0.68
RNU6-1271P-201ENST00000517049 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
RNU6-1271P-201ENST00000517049 NPM1P06748 294 aaKnown RBP eCLIP10.79□□□□□ -0.68
RNU6-1271P-201ENST00000517049 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1271P-201ENST00000517049 PELP1Q8IZL8 1130 aaKnown RBP10.79□□□□□ -0.68
RNU6-1271P-201ENST00000517049 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
RNU6-1271P-201ENST00000517049 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
RNU6-1271P-201ENST00000517049 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
RNU6-1271P-201ENST00000517049 ATMINO43313 823 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms