RNA–Protein interactions for RNA: ENST00000516937.1

RNU6-273P-201, Transcript of RNA, U6 small nuclear 273, pseudogene, humanhuman

BASIC

Gene RNU6-273P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-273P-201ENST00000516937 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
RNU6-273P-201ENST00000516937 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
RNU6-273P-201ENST00000516937 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
RNU6-273P-201ENST00000516937 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
RNU6-273P-201ENST00000516937 FOXD1Q16676 465 aa14.79□□□□□ -0.04
RNU6-273P-201ENST00000516937 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
RNU6-273P-201ENST00000516937 MSH5O43196 834 aa13.97□□□□□ -0.17
RNU6-273P-201ENST00000516937 PIAS4Q8N2W9 510 aaPredicted RBP13.93□□□□□ -0.18
RNU6-273P-201ENST00000516937 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
RNU6-273P-201ENST00000516937 ADRA2BP18089 450 aa13.9□□□□□ -0.18
RNU6-273P-201ENST00000516937 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
RNU6-273P-201ENST00000516937 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
RNU6-273P-201ENST00000516937 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
RNU6-273P-201ENST00000516937 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
RNU6-273P-201ENST00000516937 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
RNU6-273P-201ENST00000516937 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
RNU6-273P-201ENST00000516937 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
RNU6-273P-201ENST00000516937 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
RNU6-273P-201ENST00000516937 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
RNU6-273P-201ENST00000516937 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
RNU6-273P-201ENST00000516937 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
RNU6-273P-201ENST00000516937 KCNA4P22459 653 aa12.09□□□□□ -0.47
RNU6-273P-201ENST00000516937 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
RNU6-273P-201ENST00000516937 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
RNU6-273P-201ENST00000516937 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
RNU6-273P-201ENST00000516937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.76□□□□□ -0.53
RNU6-273P-201ENST00000516937 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
RNU6-273P-201ENST00000516937 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
RNU6-273P-201ENST00000516937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
RNU6-273P-201ENST00000516937 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
RNU6-273P-201ENST00000516937 APLP2Q06481 763 aa11.53□□□□□ -0.56
RNU6-273P-201ENST00000516937 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
RNU6-273P-201ENST00000516937 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
RNU6-273P-201ENST00000516937 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
RNU6-273P-201ENST00000516937 MYCNP04198 464 aaPredicted RBP11.38□□□□□ -0.59
RNU6-273P-201ENST00000516937 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
RNU6-273P-201ENST00000516937 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
RNU6-273P-201ENST00000516937 CAPN15O75808 1086 aa11.22□□□□□ -0.61
RNU6-273P-201ENST00000516937 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
RNU6-273P-201ENST00000516937 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
RNU6-273P-201ENST00000516937 DSG3P32926 999 aa11.13□□□□□ -0.63
RNU6-273P-201ENST00000516937 ZBTB22O15209 634 aa11.08□□□□□ -0.64
RNU6-273P-201ENST00000516937 TRHP20396 242 aaPredicted RBP11.06□□□□□ -0.64
RNU6-273P-201ENST00000516937 ZBTB12Q9Y330 459 aaPredicted RBP10.93□□□□□ -0.66
RNU6-273P-201ENST00000516937 ABCB7O75027 752 aa10.89□□□□□ -0.67
RNU6-273P-201ENST00000516937 POLA2Q14181 598 aa10.86□□□□□ -0.67
RNU6-273P-201ENST00000516937 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
RNU6-273P-201ENST00000516937 ATF5Q9Y2D1 282 aaPredicted RBP10.83□□□□□ -0.68
RNU6-273P-201ENST00000516937 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
RNU6-273P-201ENST00000516937 EHMT2Q96KQ7 1210 aa10.77□□□□□ -0.69
RNU6-273P-201ENST00000516937 FBLN2P98095 1184 aa10.67□□□□□ -0.7
RNU6-273P-201ENST00000516937 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
RNU6-273P-201ENST00000516937 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
RNU6-273P-201ENST00000516937 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
RNU6-273P-201ENST00000516937 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
RNU6-273P-201ENST00000516937 OSCARQ8IYS5 282 aa10.49□□□□□ -0.73
RNU6-273P-201ENST00000516937 MKRN4PQ13434 485 aaPredicted RBP10.42□□□□□ -0.74
RNU6-273P-201ENST00000516937 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
RNU6-273P-201ENST00000516937 REM2Q8IYK8 340 aaPredicted RBP10.33□□□□□ -0.76
RNU6-273P-201ENST00000516937 ZNF692Q9BU19 519 aaPredicted RBP10.32□□□□□ -0.76
RNU6-273P-201ENST00000516937 CHRDL2Q6WN34 429 aa10.31□□□□□ -0.76
RNU6-273P-201ENST00000516937 POTEHQ6S545 545 aa10.26□□□□□ -0.77
RNU6-273P-201ENST00000516937 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
RNU6-273P-201ENST00000516937 PITPNM1O00562 1244 aa10.19□□□□□ -0.78
RNU6-273P-201ENST00000516937 SPDYE4A6NLX3 237 aa10.15□□□□□ -0.78
RNU6-273P-201ENST00000516937 PABPN1Q86U42 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
RNU6-273P-201ENST00000516937 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
RNU6-273P-201ENST00000516937 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNU6-273P-201ENST00000516937 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
RNU6-273P-201ENST00000516937 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
RNU6-273P-201ENST00000516937 PROM2Q8N271 834 aa10.04□□□□□ -0.8
RNU6-273P-201ENST00000516937 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
RNU6-273P-201ENST00000516937 PRKAR2AP13861 404 aaKnown RBP9.93□□□□□ -0.82
RNU6-273P-201ENST00000516937 FKBP8Q14318 412 aa9.84□□□□□ -0.83
RNU6-273P-201ENST00000516937 HAX1O00165 279 aa9.81□□□□□ -0.84
RNU6-273P-201ENST00000516937 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
RNU6-273P-201ENST00000516937 CLCN6P51797 869 aa9.8□□□□□ -0.84
RNU6-273P-201ENST00000516937 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
RNU6-273P-201ENST00000516937 FARP1Q9Y4F1 1045 aaPredicted RBP9.79□□□□□ -0.84
RNU6-273P-201ENST00000516937 C19orf67A6NJJ6 358 aa9.78□□□□□ -0.84
RNU6-273P-201ENST00000516937 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
RNU6-273P-201ENST00000516937 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
RNU6-273P-201ENST00000516937 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
RNU6-273P-201ENST00000516937 CHADLQ6NUI6 762 aa9.75□□□□□ -0.85
RNU6-273P-201ENST00000516937 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
RNU6-273P-201ENST00000516937 PAK3O75914 559 aaPredicted RBP9.67□□□□□ -0.86
RNU6-273P-201ENST00000516937 CD44P16070 742 aaKnown RBP9.66□□□□□ -0.86
RNU6-273P-201ENST00000516937 MNX1P50219 401 aaPredicted RBP9.65□□□□□ -0.86
RNU6-273P-201ENST00000516937 MIER1Q8N108 512 aa9.62□□□□□ -0.87
RNU6-273P-201ENST00000516937 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
RNU6-273P-201ENST00000516937 ZNF579Q8NAF0 562 aaKnown RBP9.61□□□□□ -0.87
RNU6-273P-201ENST00000516937 EVX2Q03828 476 aa9.55□□□□□ -0.88
RNU6-273P-201ENST00000516937 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
RNU6-273P-201ENST00000516937 VASPP50552 380 aaPredicted RBP9.52□□□□□ -0.89
RNU6-273P-201ENST00000516937 GABBR2O75899 941 aa9.51□□□□□ -0.89
RNU6-273P-201ENST00000516937 FAM212AQ96EL1 285 aa9.45□□□□□ -0.9
RNU6-273P-201ENST00000516937 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
RNU6-273P-201ENST00000516937 CCDC61Q9Y6R9 512 aa9.43□□□□□ -0.9
RNU6-273P-201ENST00000516937 NUBP1P53384 320 aa9.42□□□□□ -0.9
RNU6-273P-201ENST00000516937 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms