RNA–Protein interactions for RNA: ENST00000516769.1

RNU6-135P-201, Transcript of RNA, U6 small nuclear 135, pseudogene, humanhuman

BASIC

Gene RNU6-135P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-135P-201ENST00000516769 AEBP2Q6ZN18 517 aaPredicted RBP5.49□□□□□ -1.53
RNU6-135P-201ENST00000516769 CHIC1Q5VXU3 224 aa5.09□□□□□ -1.59
RNU6-135P-201ENST00000516769 PHF23Q9BUL5 403 aaPredicted RBP4.59□□□□□ -1.67
RNU6-135P-201ENST00000516769 SENP3Q9H4L4 574 aaPredicted RBP4.44□□□□□ -1.7
RNU6-135P-201ENST00000516769 FOXD1Q16676 465 aa4.29□□□□□ -1.72
RNU6-135P-201ENST00000516769 PPP6R1Q9UPN7 881 aa4.1□□□□□ -1.75
RNU6-135P-201ENST00000516769 ADRA2BP18089 450 aa4.04□□□□□ -1.76
RNU6-135P-201ENST00000516769 PLPPR3Q6T4P5 718 aa3.98□□□□□ -1.77
RNU6-135P-201ENST00000516769 PIAS4Q8N2W9 510 aaPredicted RBP3.93□□□□□ -1.78
RNU6-135P-201ENST00000516769 POTEDQ86YR6 584 aa3.86□□□□□ -1.79
RNU6-135P-201ENST00000516769 MSH5O43196 834 aa3.82□□□□□ -1.8
RNU6-135P-201ENST00000516769 MAPK8IP2Q13387 824 aaPredicted RBP3.74□□□□□ -1.81
RNU6-135P-201ENST00000516769 DMRT2Q9Y5R5 561 aa3.59□□□□□ -1.83
RNU6-135P-201ENST00000516769 PPP4R3CPQ6ZMV5 832 aa3.56□□□□□ -1.84
RNU6-135P-201ENST00000516769 HOXD11P31277 338 aaPredicted RBP3.47□□□□□ -1.85
RNU6-135P-201ENST00000516769 NPM3O75607 178 aaKnown RBP3.43□□□□□ -1.86
RNU6-135P-201ENST00000516769 KCNA4P22459 653 aa3.43□□□□□ -1.86
RNU6-135P-201ENST00000516769 CNKSR2Q8WXI2 1034 aa3.43□□□□□ -1.86
RNU6-135P-201ENST00000516769 SCAF1Q9H7N4 1312 aaKnown RBP3.42□□□□□ -1.86
RNU6-135P-201ENST00000516769 RNF216Q9NWF9 866 aaPredicted RBP3.41□□□□□ -1.86
RNU6-135P-201ENST00000516769 DCAF8L1A6NGE4 600 aa3.39□□□□□ -1.87
RNU6-135P-201ENST00000516769 RNF39Q9H2S5 420 aa3.38□□□□□ -1.87
RNU6-135P-201ENST00000516769 SLC4A2P04920 1241 aa3.33□□□□□ -1.88
RNU6-135P-201ENST00000516769 U3KPZ7 1027 aaPredicted RBP3.31□□□□□ -1.88
RNU6-135P-201ENST00000516769 CACNB1Q02641 598 aaPredicted RBP3.3□□□□□ -1.88
RNU6-135P-201ENST00000516769 NCBP3Q53F19 620 aaKnown RBP3.27□□□□□ -1.89
RNU6-135P-201ENST00000516769 SPINK5Q9NQ38 1064 aaPredicted RBP3.27□□□□□ -1.89
RNU6-135P-201ENST00000516769 DNAJC5BQ9UF47 199 aa3.26□□□□□ -1.89
RNU6-135P-201ENST00000516769 ZBTB22O15209 634 aa3.24□□□□□ -1.89
RNU6-135P-201ENST00000516769 C1QBPQ07021 282 aaKnown RBP3.22□□□□□ -1.89
RNU6-135P-201ENST00000516769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-135P-201ENST00000516769 ATF5Q9Y2D1 282 aaPredicted RBP3.2□□□□□ -1.9
RNU6-135P-201ENST00000516769 DSG3P32926 999 aa3.18□□□□□ -1.9
RNU6-135P-201ENST00000516769 ABCB7O75027 752 aa3.15□□□□□ -1.91
RNU6-135P-201ENST00000516769 CAPN15O75808 1086 aa3.13□□□□□ -1.91
RNU6-135P-201ENST00000516769 SLC4A1APQ9BWU0 796 aaKnown RBP3.13□□□□□ -1.91
RNU6-135P-201ENST00000516769 TRHP20396 242 aaPredicted RBP3.11□□□□□ -1.91
RNU6-135P-201ENST00000516769 FOXD4L1Q9NU39 408 aa3.08□□□□□ -1.92
RNU6-135P-201ENST00000516769 MYCNP04198 464 aaPredicted RBP3.07□□□□□ -1.92
RNU6-135P-201ENST00000516769 POLA2Q14181 598 aa3.04□□□□□ -1.92
RNU6-135P-201ENST00000516769 MKRN4PQ13434 485 aaPredicted RBP3.03□□□□□ -1.92
RNU6-135P-201ENST00000516769 CSRNP3Q8WYN3 585 aa3.03□□□□□ -1.92
RNU6-135P-201ENST00000516769 ZNF219Q9P2Y4 722 aaPredicted RBP3.01□□□□□ -1.93
RNU6-135P-201ENST00000516769 SAMD1Q6SPF0 538 aaPredicted RBP3□□□□□ -1.93
RNU6-135P-201ENST00000516769 OSCARQ8IYS5 282 aa3□□□□□ -1.93
RNU6-135P-201ENST00000516769 POTEHQ6S545 545 aa2.97□□□□□ -1.93
RNU6-135P-201ENST00000516769 EHMT2Q96KQ7 1210 aa2.97□□□□□ -1.93
RNU6-135P-201ENST00000516769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.95□□□□□ -1.94
RNU6-135P-201ENST00000516769 HNRNPUL2Q1KMD3 747 aaKnown RBP2.95□□□□□ -1.94
RNU6-135P-201ENST00000516769 PITPNM1O00562 1244 aa2.92□□□□□ -1.94
RNU6-135P-201ENST00000516769 EVX2Q03828 476 aa2.92□□□□□ -1.94
RNU6-135P-201ENST00000516769 CHRDL2Q6WN34 429 aa2.91□□□□□ -1.94
RNU6-135P-201ENST00000516769 REM2Q8IYK8 340 aaPredicted RBP2.91□□□□□ -1.94
RNU6-135P-201ENST00000516769 ATXN8OSP0DMR3 200 aa2.9□□□□□ -1.95
RNU6-135P-201ENST00000516769 APLP2Q06481 763 aa2.9□□□□□ -1.95
RNU6-135P-201ENST00000516769 PIP4P2Q8N4L2 257 aa2.9□□□□□ -1.95
RNU6-135P-201ENST00000516769 SSUH2Q9Y2M2 353 aa2.88□□□□□ -1.95
RNU6-135P-201ENST00000516769 FXR2P51116 673 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-135P-201ENST00000516769 AKT1S1Q96B36 256 aa2.86□□□□□ -1.95
RNU6-135P-201ENST00000516769 RBM42Q9BTD8 480 aaKnown RBP2.86□□□□□ -1.95
RNU6-135P-201ENST00000516769 CHADLQ6NUI6 762 aa2.84□□□□□ -1.95
RNU6-135P-201ENST00000516769 PABPN1Q86U42 306 aaKnown RBP eCLIP2.82□□□□□ -1.96
RNU6-135P-201ENST00000516769 ZBTB12Q9Y330 459 aaPredicted RBP2.82□□□□□ -1.96
RNU6-135P-201ENST00000516769 SPDYE2BA6NHP3 402 aa2.81□□□□□ -1.96
RNU6-135P-201ENST00000516769 SPDYE6P0CI01 402 aa2.81□□□□□ -1.96
RNU6-135P-201ENST00000516769 SPDYE2Q495Y8 402 aa2.81□□□□□ -1.96
RNU6-135P-201ENST00000516769 ZNF692Q9BU19 519 aaPredicted RBP2.8□□□□□ -1.96
RNU6-135P-201ENST00000516769 PRKAR2AP13861 404 aaKnown RBP2.79□□□□□ -1.96
RNU6-135P-201ENST00000516769 FBLN2P98095 1184 aa2.79□□□□□ -1.96
RNU6-135P-201ENST00000516769 CLEC11AQ9Y240 323 aa2.79□□□□□ -1.96
RNU6-135P-201ENST00000516769 POTEIP0CG38 1075 aa2.78□□□□□ -1.96
RNU6-135P-201ENST00000516769 SP7Q8TDD2 431 aaPredicted RBP2.78□□□□□ -1.96
RNU6-135P-201ENST00000516769 CREBZFQ9NS37 354 aa2.78□□□□□ -1.96
RNU6-135P-201ENST00000516769 C19orf67A6NJJ6 358 aa2.77□□□□□ -1.97
RNU6-135P-201ENST00000516769 MNX1P50219 401 aaPredicted RBP2.77□□□□□ -1.97
RNU6-135P-201ENST00000516769 PROM2Q8N271 834 aa2.77□□□□□ -1.97
RNU6-135P-201ENST00000516769 SPDYE4A6NLX3 237 aa2.75□□□□□ -1.97
RNU6-135P-201ENST00000516769 HAX1O00165 279 aa2.74□□□□□ -1.97
RNU6-135P-201ENST00000516769 SPDYE1Q8NFV5 336 aaPredicted RBP2.74□□□□□ -1.97
RNU6-135P-201ENST00000516769 GABBR2O75899 941 aa2.73□□□□□ -1.97
RNU6-135P-201ENST00000516769 FARP1Q9Y4F1 1045 aaPredicted RBP2.72□□□□□ -1.97
RNU6-135P-201ENST00000516769 GALR2O43603 387 aaPredicted RBP2.71□□□□□ -1.98
RNU6-135P-201ENST00000516769 PRR29P0C7W0 189 aa2.71□□□□□ -1.98
RNU6-135P-201ENST00000516769 PHF12Q96QT6 1004 aa2.71□□□□□ -1.98
RNU6-135P-201ENST00000516769 TRPC6Q9Y210 931 aa2.71□□□□□ -1.98
RNU6-135P-201ENST00000516769 POTEB2H3BUK9 544 aa2.7□□□□□ -1.98
RNU6-135P-201ENST00000516769 PELP1Q8IZL8 1130 aaKnown RBP2.7□□□□□ -1.98
RNU6-135P-201ENST00000516769 CD44P16070 742 aaKnown RBP2.69□□□□□ -1.98
RNU6-135P-201ENST00000516769 POTEJP0CG39 1038 aa2.68□□□□□ -1.98
RNU6-135P-201ENST00000516769 FKBP8Q14318 412 aa2.68□□□□□ -1.98
RNU6-135P-201ENST00000516769 RASEFQ8IZ41 740 aa2.68□□□□□ -1.98
RNU6-135P-201ENST00000516769 POTEFA5A3E0 1075 aa2.66□□□□□ -1.98
RNU6-135P-201ENST00000516769 ZNF579Q8NAF0 562 aaKnown RBP2.66□□□□□ -1.98
RNU6-135P-201ENST00000516769 MS4A3Q96HJ5 214 aa2.66□□□□□ -1.98
RNU6-135P-201ENST00000516769 ZRANB1Q9UGI0 708 aa2.65□□□□□ -1.99
RNU6-135P-201ENST00000516769 NUBP1P53384 320 aa2.64□□□□□ -1.99
RNU6-135P-201ENST00000516769 CCDC61Q9Y6R9 512 aa2.64□□□□□ -1.99
RNU6-135P-201ENST00000516769 LCE2DQ5TA82 110 aaPredicted RBP2.63□□□□□ -1.99
RNU6-135P-201ENST00000516769 TSPYL2Q9H2G4 693 aaPredicted RBP2.62□□□□□ -1.99
RNU6-135P-201ENST00000516769 MAP3K13O43283 966 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms