RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 AEBP2Q6ZN18 517 aaPredicted RBP7.39□□□□□ -1.23
SCARNA16.3-201ENST00000516595 CHIC1Q5VXU3 224 aa7.34□□□□□ -1.23
SCARNA16.3-201ENST00000516595 PHF23Q9BUL5 403 aaPredicted RBP6.46□□□□□ -1.38
SCARNA16.3-201ENST00000516595 SENP3Q9H4L4 574 aaPredicted RBP6.29□□□□□ -1.4
SCARNA16.3-201ENST00000516595 POTEDQ86YR6 584 aa6.25□□□□□ -1.41
SCARNA16.3-201ENST00000516595 PLPPR3Q6T4P5 718 aa6.05□□□□□ -1.44
SCARNA16.3-201ENST00000516595 FOXD1Q16676 465 aa5.82□□□□□ -1.48
SCARNA16.3-201ENST00000516595 ADRA2BP18089 450 aa5.72□□□□□ -1.49
SCARNA16.3-201ENST00000516595 PPP6R1Q9UPN7 881 aa5.68□□□□□ -1.5
SCARNA16.3-201ENST00000516595 PIAS4Q8N2W9 510 aaPredicted RBP5.55□□□□□ -1.52
SCARNA16.3-201ENST00000516595 PPP4R3CPQ6ZMV5 832 aa5.35□□□□□ -1.55
SCARNA16.3-201ENST00000516595 MSH5O43196 834 aa5.34□□□□□ -1.55
SCARNA16.3-201ENST00000516595 KCNA4P22459 653 aa5.33□□□□□ -1.56
SCARNA16.3-201ENST00000516595 SCAF1Q9H7N4 1312 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.3-201ENST00000516595 NCBP3Q53F19 620 aaKnown RBP5.27□□□□□ -1.57
SCARNA16.3-201ENST00000516595 NISCHQ9Y2I1 1504 aa5.23□□□□□ -1.57
SCARNA16.3-201ENST00000516595 MAPK8IP2Q13387 824 aaPredicted RBP5.16□□□□□ -1.58
SCARNA16.3-201ENST00000516595 CNKSR2Q8WXI2 1034 aa5.16□□□□□ -1.58
SCARNA16.3-201ENST00000516595 NPM3O75607 178 aaKnown RBP5.15□□□□□ -1.59
SCARNA16.3-201ENST00000516595 EHMT2Q96KQ7 1210 aa5.15□□□□□ -1.59
SCARNA16.3-201ENST00000516595 SLC4A1APQ9BWU0 796 aaKnown RBP5.13□□□□□ -1.59
SCARNA16.3-201ENST00000516595 RNF216Q9NWF9 866 aaPredicted RBP5.02□□□□□ -1.61
SCARNA16.3-201ENST00000516595 DMRT2Q9Y5R5 561 aa5.02□□□□□ -1.61
SCARNA16.3-201ENST00000516595 CSRNP3Q8WYN3 585 aa4.97□□□□□ -1.61
SCARNA16.3-201ENST00000516595 DCAF8L1A6NGE4 600 aa4.94□□□□□ -1.62
SCARNA16.3-201ENST00000516595 HOXD11P31277 338 aaPredicted RBP4.94□□□□□ -1.62
SCARNA16.3-201ENST00000516595 ZBTB22O15209 634 aa4.87□□□□□ -1.63
SCARNA16.3-201ENST00000516595 FOXD4L1Q9NU39 408 aa4.87□□□□□ -1.63
SCARNA16.3-201ENST00000516595 DNAJC5BQ9UF47 199 aa4.86□□□□□ -1.63
SCARNA16.3-201ENST00000516595 CACNB1Q02641 598 aaPredicted RBP4.82□□□□□ -1.64
SCARNA16.3-201ENST00000516595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCARNA16.3-201ENST00000516595 SLC4A2P04920 1241 aa4.8□□□□□ -1.64
SCARNA16.3-201ENST00000516595 MYCNP04198 464 aaPredicted RBP4.75□□□□□ -1.65
SCARNA16.3-201ENST00000516595 POTEHQ6S545 545 aa4.72□□□□□ -1.65
SCARNA16.3-201ENST00000516595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.7□□□□□ -1.66
SCARNA16.3-201ENST00000516595 HNRNPUL2Q1KMD3 747 aaKnown RBP4.7□□□□□ -1.66
SCARNA16.3-201ENST00000516595 ATXN8OSP0DMR3 200 aa4.68□□□□□ -1.66
SCARNA16.3-201ENST00000516595 SAMD1Q6SPF0 538 aaPredicted RBP4.67□□□□□ -1.66
SCARNA16.3-201ENST00000516595 U3KPZ7 1027 aaPredicted RBP4.67□□□□□ -1.66
SCARNA16.3-201ENST00000516595 APLP2Q06481 763 aa4.64□□□□□ -1.67
SCARNA16.3-201ENST00000516595 CCDC180Q9P1Z9 1646 aa4.64□□□□□ -1.67
SCARNA16.3-201ENST00000516595 ATF5Q9Y2D1 282 aaPredicted RBP4.61□□□□□ -1.67
SCARNA16.3-201ENST00000516595 TRHP20396 242 aaPredicted RBP4.58□□□□□ -1.68
SCARNA16.3-201ENST00000516595 CAPN15O75808 1086 aa4.57□□□□□ -1.68
SCARNA16.3-201ENST00000516595 ZNF219Q9P2Y4 722 aaPredicted RBP4.56□□□□□ -1.68
SCARNA16.3-201ENST00000516595 RNF39Q9H2S5 420 aa4.55□□□□□ -1.68
SCARNA16.3-201ENST00000516595 C1QBPQ07021 282 aaKnown RBP4.54□□□□□ -1.68
SCARNA16.3-201ENST00000516595 FKBP8Q14318 412 aa4.54□□□□□ -1.68
SCARNA16.3-201ENST00000516595 SPINK5Q9NQ38 1064 aaPredicted RBP4.53□□□□□ -1.68
SCARNA16.3-201ENST00000516595 POLA2Q14181 598 aa4.51□□□□□ -1.69
SCARNA16.3-201ENST00000516595 FBLN2P98095 1184 aa4.48□□□□□ -1.69
SCARNA16.3-201ENST00000516595 ABCB7O75027 752 aa4.47□□□□□ -1.69
SCARNA16.3-201ENST00000516595 SPDYE4A6NLX3 237 aa4.42□□□□□ -1.7
SCARNA16.3-201ENST00000516595 ZBTB12Q9Y330 459 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.3-201ENST00000516595 MKRN4PQ13434 485 aaPredicted RBP4.4□□□□□ -1.71
SCARNA16.3-201ENST00000516595 ABCC9O60706 1549 aa4.4□□□□□ -1.71
SCARNA16.3-201ENST00000516595 ZCCHC6Q5VYS8 1495 aaKnown RBP4.39□□□□□ -1.71
SCARNA16.3-201ENST00000516595 DSG3P32926 999 aa4.39□□□□□ -1.71
SCARNA16.3-201ENST00000516595 MYO15BQ96JP2 1530 aa4.39□□□□□ -1.71
SCARNA16.3-201ENST00000516595 DCAF1Q9Y4B6 1507 aa4.38□□□□□ -1.71
SCARNA16.3-201ENST00000516595 ZNF692Q9BU19 519 aaPredicted RBP4.35□□□□□ -1.71
SCARNA16.3-201ENST00000516595 FBXO3Q9UK99 471 aa4.35□□□□□ -1.71
SCARNA16.3-201ENST00000516595 NACADO15069 1562 aa4.34□□□□□ -1.71
SCARNA16.3-201ENST00000516595 RB1CC1Q8TDY2 1594 aa4.31□□□□□ -1.72
SCARNA16.3-201ENST00000516595 OSCARQ8IYS5 282 aa4.31□□□□□ -1.72
SCARNA16.3-201ENST00000516595 AMER1Q5JTC6 1135 aaPredicted RBP4.3□□□□□ -1.72
SCARNA16.3-201ENST00000516595 RTN4Q9NQC3 1192 aaKnown RBP4.29□□□□□ -1.72
SCARNA16.3-201ENST00000516595 SPDYE2BA6NHP3 402 aa4.28□□□□□ -1.72
SCARNA16.3-201ENST00000516595 SPDYE6P0CI01 402 aa4.28□□□□□ -1.72
SCARNA16.3-201ENST00000516595 SPDYE2Q495Y8 402 aa4.28□□□□□ -1.72
SCARNA16.3-201ENST00000516595 PABPN1Q86U42 306 aaKnown RBP eCLIP4.27□□□□□ -1.73
SCARNA16.3-201ENST00000516595 KLHL34Q8N239 644 aa4.25□□□□□ -1.73
SCARNA16.3-201ENST00000516595 VASPP50552 380 aaPredicted RBP4.24□□□□□ -1.73
SCARNA16.3-201ENST00000516595 MIER1Q8N108 512 aa4.24□□□□□ -1.73
SCARNA16.3-201ENST00000516595 PROM2Q8N271 834 aa4.24□□□□□ -1.73
SCARNA16.3-201ENST00000516595 PLCD3Q8N3E9 789 aa4.23□□□□□ -1.73
SCARNA16.3-201ENST00000516595 STAG3Q9UJ98 1225 aa4.23□□□□□ -1.73
SCARNA16.3-201ENST00000516595 SHROOM4Q9ULL8 1493 aa4.23□□□□□ -1.73
SCARNA16.3-201ENST00000516595 SSUH2Q9Y2M2 353 aa4.22□□□□□ -1.73
SCARNA16.3-201ENST00000516595 PLEKHG5O94827 1062 aa4.21□□□□□ -1.74
SCARNA16.3-201ENST00000516595 DCAF8L2P0C7V8 631 aa4.21□□□□□ -1.74
SCARNA16.3-201ENST00000516595 RBM42Q9BTD8 480 aaKnown RBP4.21□□□□□ -1.74
SCARNA16.3-201ENST00000516595 IFNLR1Q8IU57 520 aaPredicted RBP4.2□□□□□ -1.74
SCARNA16.3-201ENST00000516595 PLSCR2Q9NRY7 297 aa4.2□□□□□ -1.74
SCARNA16.3-201ENST00000516595 CLEC11AQ9Y240 323 aa4.2□□□□□ -1.74
SCARNA16.3-201ENST00000516595 SCRIBQ14160 1630 aa4.17□□□□□ -1.74
SCARNA16.3-201ENST00000516595 BICRAQ9NZM4 1560 aa4.17□□□□□ -1.74
SCARNA16.3-201ENST00000516595 UNC13AQ9UPW8 1703 aa4.16□□□□□ -1.74
SCARNA16.3-201ENST00000516595 SPDYE1Q8NFV5 336 aaPredicted RBP4.16□□□□□ -1.74
SCARNA16.3-201ENST00000516595 SPOCK2Q92563 424 aa4.16□□□□□ -1.74
SCARNA16.3-201ENST00000516595 AKT1S1Q96B36 256 aa4.16□□□□□ -1.74
SCARNA16.3-201ENST00000516595 PRR29P0C7W0 189 aa4.15□□□□□ -1.75
SCARNA16.3-201ENST00000516595 ZBTB47Q9UFB7 747 aaPredicted RBP4.15□□□□□ -1.75
SCARNA16.3-201ENST00000516595 REM2Q8IYK8 340 aaPredicted RBP4.14□□□□□ -1.75
SCARNA16.3-201ENST00000516595 CIZ1Q9ULV3 898 aaPredicted RBP4.13□□□□□ -1.75
SCARNA16.3-201ENST00000516595 ECM2O94769 699 aaPredicted RBP4.1□□□□□ -1.75
SCARNA16.3-201ENST00000516595 DCAF8Q5TAQ9 597 aa4.09□□□□□ -1.75
SCARNA16.3-201ENST00000516595 SLC24A1O60721 1099 aa4.08□□□□□ -1.76
SCARNA16.3-201ENST00000516595 PKD2Q13563 968 aa4.08□□□□□ -1.76
SCARNA16.3-201ENST00000516595 PITPNM1O00562 1244 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms