RNA–Protein interactions for RNA: ENST00000516564.1

RNU6-358P-201, Transcript of RNA, U6 small nuclear 358, pseudogene, humanhuman

BASIC

Gene RNU6-358P, Length 75 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-358P-201ENST00000516564 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
RNU6-358P-201ENST00000516564 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
RNU6-358P-201ENST00000516564 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
RNU6-358P-201ENST00000516564 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
RNU6-358P-201ENST00000516564 FOXD1Q16676 465 aa18.37■□□□□ 0.53
RNU6-358P-201ENST00000516564 PLPPR3Q6T4P5 718 aa17.74■□□□□ 0.43
RNU6-358P-201ENST00000516564 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
RNU6-358P-201ENST00000516564 ADRA2BP18089 450 aa17.28■□□□□ 0.36
RNU6-358P-201ENST00000516564 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
RNU6-358P-201ENST00000516564 MSH5O43196 834 aa17.08■□□□□ 0.32
RNU6-358P-201ENST00000516564 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
RNU6-358P-201ENST00000516564 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
RNU6-358P-201ENST00000516564 SCAF1Q9H7N4 1312 aaKnown RBP15.75■□□□□ 0.11
RNU6-358P-201ENST00000516564 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
RNU6-358P-201ENST00000516564 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
RNU6-358P-201ENST00000516564 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
RNU6-358P-201ENST00000516564 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
RNU6-358P-201ENST00000516564 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
RNU6-358P-201ENST00000516564 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
RNU6-358P-201ENST00000516564 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
RNU6-358P-201ENST00000516564 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
RNU6-358P-201ENST00000516564 KCNA4P22459 653 aa14.71□□□□□ -0.05
RNU6-358P-201ENST00000516564 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
RNU6-358P-201ENST00000516564 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
RNU6-358P-201ENST00000516564 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
RNU6-358P-201ENST00000516564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
RNU6-358P-201ENST00000516564 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
RNU6-358P-201ENST00000516564 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
RNU6-358P-201ENST00000516564 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
RNU6-358P-201ENST00000516564 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
RNU6-358P-201ENST00000516564 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
RNU6-358P-201ENST00000516564 CAPN15O75808 1086 aa13.88□□□□□ -0.19
RNU6-358P-201ENST00000516564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
RNU6-358P-201ENST00000516564 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
RNU6-358P-201ENST00000516564 DSG3P32926 999 aa13.75□□□□□ -0.21
RNU6-358P-201ENST00000516564 APLP2Q06481 763 aa13.72□□□□□ -0.21
RNU6-358P-201ENST00000516564 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
RNU6-358P-201ENST00000516564 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.21
RNU6-358P-201ENST00000516564 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
RNU6-358P-201ENST00000516564 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
RNU6-358P-201ENST00000516564 ZNF219Q9P2Y4 722 aaPredicted RBP13.63□□□□□ -0.23
RNU6-358P-201ENST00000516564 ABCB7O75027 752 aa13.6□□□□□ -0.23
RNU6-358P-201ENST00000516564 ZBTB22O15209 634 aa13.53□□□□□ -0.24
RNU6-358P-201ENST00000516564 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
RNU6-358P-201ENST00000516564 POLA2Q14181 598 aa13.37□□□□□ -0.27
RNU6-358P-201ENST00000516564 ATXN8OSP0DMR3 200 aa13.17□□□□□ -0.3
RNU6-358P-201ENST00000516564 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
RNU6-358P-201ENST00000516564 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
RNU6-358P-201ENST00000516564 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
RNU6-358P-201ENST00000516564 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
RNU6-358P-201ENST00000516564 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
RNU6-358P-201ENST00000516564 POTEHQ6S545 545 aa12.91□□□□□ -0.34
RNU6-358P-201ENST00000516564 FBLN2P98095 1184 aa12.83□□□□□ -0.36
RNU6-358P-201ENST00000516564 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
RNU6-358P-201ENST00000516564 MKRN4PQ13434 485 aaPredicted RBP12.79□□□□□ -0.36
RNU6-358P-201ENST00000516564 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
RNU6-358P-201ENST00000516564 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
RNU6-358P-201ENST00000516564 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
RNU6-358P-201ENST00000516564 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
RNU6-358P-201ENST00000516564 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
RNU6-358P-201ENST00000516564 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
RNU6-358P-201ENST00000516564 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
RNU6-358P-201ENST00000516564 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
RNU6-358P-201ENST00000516564 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
RNU6-358P-201ENST00000516564 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNU6-358P-201ENST00000516564 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
RNU6-358P-201ENST00000516564 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
RNU6-358P-201ENST00000516564 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNU6-358P-201ENST00000516564 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
RNU6-358P-201ENST00000516564 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
RNU6-358P-201ENST00000516564 HAX1O00165 279 aa12.25□□□□□ -0.45
RNU6-358P-201ENST00000516564 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
RNU6-358P-201ENST00000516564 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
RNU6-358P-201ENST00000516564 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
RNU6-358P-201ENST00000516564 EVX2Q03828 476 aa12.13□□□□□ -0.47
RNU6-358P-201ENST00000516564 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
RNU6-358P-201ENST00000516564 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
RNU6-358P-201ENST00000516564 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
RNU6-358P-201ENST00000516564 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
RNU6-358P-201ENST00000516564 PROM2Q8N271 834 aa11.95□□□□□ -0.5
RNU6-358P-201ENST00000516564 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
RNU6-358P-201ENST00000516564 GABBR2O75899 941 aa11.84□□□□□ -0.51
RNU6-358P-201ENST00000516564 FKBP8Q14318 412 aa11.83□□□□□ -0.52
RNU6-358P-201ENST00000516564 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
RNU6-358P-201ENST00000516564 ZRANB1Q9UGI0 708 aa11.76□□□□□ -0.53
RNU6-358P-201ENST00000516564 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNU6-358P-201ENST00000516564 MIER1Q8N108 512 aa11.69□□□□□ -0.54
RNU6-358P-201ENST00000516564 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
RNU6-358P-201ENST00000516564 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
RNU6-358P-201ENST00000516564 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
RNU6-358P-201ENST00000516564 CLCN6P51797 869 aa11.63□□□□□ -0.55
RNU6-358P-201ENST00000516564 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
RNU6-358P-201ENST00000516564 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
RNU6-358P-201ENST00000516564 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
RNU6-358P-201ENST00000516564 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
RNU6-358P-201ENST00000516564 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
RNU6-358P-201ENST00000516564 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
RNU6-358P-201ENST00000516564 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
RNU6-358P-201ENST00000516564 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
RNU6-358P-201ENST00000516564 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms