RNA–Protein interactions for RNA: ENST00000516530.1

RNU6-1061P-201, Transcript of RNA, U6 small nuclear 1061, pseudogene, humanhuman

BASIC

Gene RNU6-1061P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1061P-201ENST00000516530 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
RNU6-1061P-201ENST00000516530 CHIC1Q5VXU3 224 aa13.46□□□□□ -0.25
RNU6-1061P-201ENST00000516530 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
RNU6-1061P-201ENST00000516530 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
RNU6-1061P-201ENST00000516530 PHF23Q9BUL5 403 aaPredicted RBP12.09□□□□□ -0.47
RNU6-1061P-201ENST00000516530 FOXD1Q16676 465 aa11.62□□□□□ -0.55
RNU6-1061P-201ENST00000516530 MSH5O43196 834 aa11.17□□□□□ -0.62
RNU6-1061P-201ENST00000516530 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
RNU6-1061P-201ENST00000516530 PLPPR3Q6T4P5 718 aa10.48□□□□□ -0.73
RNU6-1061P-201ENST00000516530 PPP6R1Q9UPN7 881 aa10.44□□□□□ -0.74
RNU6-1061P-201ENST00000516530 ADRA2BP18089 450 aa10.36□□□□□ -0.75
RNU6-1061P-201ENST00000516530 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1061P-201ENST00000516530 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
RNU6-1061P-201ENST00000516530 MAPK8IP2Q13387 824 aaPredicted RBP9.61□□□□□ -0.87
RNU6-1061P-201ENST00000516530 SCAF1Q9H7N4 1312 aaKnown RBP9.6□□□□□ -0.87
RNU6-1061P-201ENST00000516530 POTEHQ6S545 545 aa9.54□□□□□ -0.88
RNU6-1061P-201ENST00000516530 RNF39Q9H2S5 420 aa9.51□□□□□ -0.89
RNU6-1061P-201ENST00000516530 HOXD11P31277 338 aaPredicted RBP9.26□□□□□ -0.93
RNU6-1061P-201ENST00000516530 C1QBPQ07021 282 aaKnown RBP9.26□□□□□ -0.93
RNU6-1061P-201ENST00000516530 DCAF8L1A6NGE4 600 aa9.21□□□□□ -0.94
RNU6-1061P-201ENST00000516530 DNAJC5BQ9UF47 199 aa9.14□□□□□ -0.95
RNU6-1061P-201ENST00000516530 PPP4R3CPQ6ZMV5 832 aa9.09□□□□□ -0.95
RNU6-1061P-201ENST00000516530 RNF216Q9NWF9 866 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1061P-201ENST00000516530 CNKSR2Q8WXI2 1034 aa9.05□□□□□ -0.96
RNU6-1061P-201ENST00000516530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.01
RNU6-1061P-201ENST00000516530 NCBP3Q53F19 620 aaKnown RBP8.69□□□□□ -1.02
RNU6-1061P-201ENST00000516530 DSG3P32926 999 aa8.58□□□□□ -1.04
RNU6-1061P-201ENST00000516530 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
RNU6-1061P-201ENST00000516530 U3KPZ7 1027 aaPredicted RBP8.53□□□□□ -1.04
RNU6-1061P-201ENST00000516530 NPM3O75607 178 aaKnown RBP8.5□□□□□ -1.05
RNU6-1061P-201ENST00000516530 CAPN15O75808 1086 aa8.48□□□□□ -1.05
RNU6-1061P-201ENST00000516530 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
RNU6-1061P-201ENST00000516530 APLP2Q06481 763 aa8.36□□□□□ -1.07
RNU6-1061P-201ENST00000516530 CHRDL2Q6WN34 429 aa8.34□□□□□ -1.07
RNU6-1061P-201ENST00000516530 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
RNU6-1061P-201ENST00000516530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.25□□□□□ -1.09
RNU6-1061P-201ENST00000516530 HNRNPUL2Q1KMD3 747 aaKnown RBP8.25□□□□□ -1.09
RNU6-1061P-201ENST00000516530 RBM42Q9BTD8 480 aaKnown RBP8.25□□□□□ -1.09
RNU6-1061P-201ENST00000516530 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
RNU6-1061P-201ENST00000516530 SLC4A2P04920 1241 aa8.22□□□□□ -1.09
RNU6-1061P-201ENST00000516530 ABCB7O75027 752 aa8.21□□□□□ -1.1
RNU6-1061P-201ENST00000516530 SAMD1Q6SPF0 538 aaPredicted RBP8.17□□□□□ -1.1
RNU6-1061P-201ENST00000516530 PLSCR2Q9NRY7 297 aa8.08□□□□□ -1.12
RNU6-1061P-201ENST00000516530 KCNA4P22459 653 aa7.98□□□□□ -1.13
RNU6-1061P-201ENST00000516530 PIP4P2Q8N4L2 257 aa7.98□□□□□ -1.13
RNU6-1061P-201ENST00000516530 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
RNU6-1061P-201ENST00000516530 POLA2Q14181 598 aa7.96□□□□□ -1.14
RNU6-1061P-201ENST00000516530 LHX8Q68G74 356 aa7.95□□□□□ -1.14
RNU6-1061P-201ENST00000516530 HAX1O00165 279 aa7.94□□□□□ -1.14
RNU6-1061P-201ENST00000516530 MYCNP04198 464 aaPredicted RBP7.92□□□□□ -1.14
RNU6-1061P-201ENST00000516530 EVX2Q03828 476 aa7.92□□□□□ -1.14
RNU6-1061P-201ENST00000516530 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.14
RNU6-1061P-201ENST00000516530 REM2Q8IYK8 340 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1061P-201ENST00000516530 FXR2P51116 673 aaKnown RBP eCLIP7.82□□□□□ -1.16
RNU6-1061P-201ENST00000516530 PITPNM1O00562 1244 aa7.75□□□□□ -1.17
RNU6-1061P-201ENST00000516530 OSCARQ8IYS5 282 aa7.71□□□□□ -1.18
RNU6-1061P-201ENST00000516530 ATF5Q9Y2D1 282 aaPredicted RBP7.67□□□□□ -1.18
RNU6-1061P-201ENST00000516530 GABBR2O75899 941 aa7.65□□□□□ -1.18
RNU6-1061P-201ENST00000516530 FOXD4L1Q9NU39 408 aa7.62□□□□□ -1.19
RNU6-1061P-201ENST00000516530 C19orf67A6NJJ6 358 aa7.6□□□□□ -1.19
RNU6-1061P-201ENST00000516530 SPDYE2BA6NHP3 402 aa7.59□□□□□ -1.19
RNU6-1061P-201ENST00000516530 SPDYE6P0CI01 402 aa7.59□□□□□ -1.19
RNU6-1061P-201ENST00000516530 SPDYE2Q495Y8 402 aa7.59□□□□□ -1.19
RNU6-1061P-201ENST00000516530 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
RNU6-1061P-201ENST00000516530 POTEMA6NI47 508 aa7.54□□□□□ -1.2
RNU6-1061P-201ENST00000516530 PRKAR2AP13861 404 aaKnown RBP7.53□□□□□ -1.2
RNU6-1061P-201ENST00000516530 SPDYE1Q8NFV5 336 aaPredicted RBP7.53□□□□□ -1.2
RNU6-1061P-201ENST00000516530 ATXN8OSP0DMR3 200 aa7.51□□□□□ -1.21
RNU6-1061P-201ENST00000516530 FBLN2P98095 1184 aa7.48□□□□□ -1.21
RNU6-1061P-201ENST00000516530 POTEGQ6S5H5 508 aa7.48□□□□□ -1.21
RNU6-1061P-201ENST00000516530 SLC4A1APQ9BWU0 796 aaKnown RBP7.48□□□□□ -1.21
RNU6-1061P-201ENST00000516530 PCDH10Q9P2E7 1040 aa7.47□□□□□ -1.21
RNU6-1061P-201ENST00000516530 SSUH2Q9Y2M2 353 aa7.45□□□□□ -1.22
RNU6-1061P-201ENST00000516530 CLCN6P51797 869 aa7.42□□□□□ -1.22
RNU6-1061P-201ENST00000516530 CLEC11AQ9Y240 323 aa7.42□□□□□ -1.22
RNU6-1061P-201ENST00000516530 OTUD5Q96G74 571 aa7.41□□□□□ -1.22
RNU6-1061P-201ENST00000516530 ZNF692Q9BU19 519 aaPredicted RBP7.36□□□□□ -1.23
RNU6-1061P-201ENST00000516530 MKRN4PQ13434 485 aaPredicted RBP7.34□□□□□ -1.23
RNU6-1061P-201ENST00000516530 ZBTB22O15209 634 aa7.33□□□□□ -1.24
RNU6-1061P-201ENST00000516530 CHADLQ6NUI6 762 aa7.31□□□□□ -1.24
RNU6-1061P-201ENST00000516530 PRR29P0C7W0 189 aa7.3□□□□□ -1.24
RNU6-1061P-201ENST00000516530 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
RNU6-1061P-201ENST00000516530 POTEB2H3BUK9 544 aa7.28□□□□□ -1.24
RNU6-1061P-201ENST00000516530 CD44P16070 742 aaKnown RBP7.28□□□□□ -1.24
RNU6-1061P-201ENST00000516530 FARP1Q9Y4F1 1045 aaPredicted RBP7.25□□□□□ -1.25
RNU6-1061P-201ENST00000516530 PABPN1Q86U42 306 aaKnown RBP eCLIP7.23□□□□□ -1.25
RNU6-1061P-201ENST00000516530 ZNF579Q8NAF0 562 aaKnown RBP7.22□□□□□ -1.25
RNU6-1061P-201ENST00000516530 DCBLD2Q96PD2 775 aa7.22□□□□□ -1.25
RNU6-1061P-201ENST00000516530 ZRANB1Q9UGI0 708 aa7.1□□□□□ -1.27
RNU6-1061P-201ENST00000516530 GALR2O43603 387 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1061P-201ENST00000516530 STAG3Q9UJ98 1225 aa7.06□□□□□ -1.28
RNU6-1061P-201ENST00000516530 POTEJP0CG39 1038 aa7.05□□□□□ -1.28
RNU6-1061P-201ENST00000516530 CREBZFQ9NS37 354 aa7.05□□□□□ -1.28
RNU6-1061P-201ENST00000516530 PAK3O75914 559 aaPredicted RBP7.01□□□□□ -1.29
RNU6-1061P-201ENST00000516530 MAMSTRQ6ZN01 415 aa6.99□□□□□ -1.29
RNU6-1061P-201ENST00000516530 CDAN1Q8IWY9 1227 aa6.99□□□□□ -1.29
RNU6-1061P-201ENST00000516530 ASTLQ6HA08 431 aaPredicted RBP6.98□□□□□ -1.29
RNU6-1061P-201ENST00000516530 C7P10643 843 aa6.97□□□□□ -1.29
RNU6-1061P-201ENST00000516530 MMRN1Q13201 1228 aa6.96□□□□□ -1.3
RNU6-1061P-201ENST00000516530 PELP1Q8IZL8 1130 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms