RNA–Protein interactions for RNA: ENST00000516307.1

RNU4ATAC4P-201, Transcript of RNA, U4atac small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4ATAC4P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC4P-201ENST00000516307 AEBP2Q6ZN18 517 aaPredicted RBP5.83□□□□□ -1.48
RNU4ATAC4P-201ENST00000516307 CHIC1Q5VXU3 224 aa5.45□□□□□ -1.54
RNU4ATAC4P-201ENST00000516307 SENP3Q9H4L4 574 aaPredicted RBP5.01□□□□□ -1.61
RNU4ATAC4P-201ENST00000516307 PHF23Q9BUL5 403 aaPredicted RBP4.92□□□□□ -1.62
RNU4ATAC4P-201ENST00000516307 POTEDQ86YR6 584 aa4.81□□□□□ -1.64
RNU4ATAC4P-201ENST00000516307 FOXD1Q16676 465 aa4.71□□□□□ -1.66
RNU4ATAC4P-201ENST00000516307 MSH5O43196 834 aa4.5□□□□□ -1.69
RNU4ATAC4P-201ENST00000516307 PIAS4Q8N2W9 510 aaPredicted RBP4.34□□□□□ -1.71
RNU4ATAC4P-201ENST00000516307 PPP6R1Q9UPN7 881 aa4.21□□□□□ -1.74
RNU4ATAC4P-201ENST00000516307 ADRA2BP18089 450 aa4.18□□□□□ -1.74
RNU4ATAC4P-201ENST00000516307 PLPPR3Q6T4P5 718 aa4.12□□□□□ -1.75
RNU4ATAC4P-201ENST00000516307 CACNB1Q02641 598 aaPredicted RBP4.02□□□□□ -1.77
RNU4ATAC4P-201ENST00000516307 DMRT2Q9Y5R5 561 aa3.93□□□□□ -1.78
RNU4ATAC4P-201ENST00000516307 MAPK8IP2Q13387 824 aaPredicted RBP3.91□□□□□ -1.78
RNU4ATAC4P-201ENST00000516307 SCAF1Q9H7N4 1312 aaKnown RBP3.83□□□□□ -1.8
RNU4ATAC4P-201ENST00000516307 RNF39Q9H2S5 420 aa3.81□□□□□ -1.8
RNU4ATAC4P-201ENST00000516307 DCAF8L1A6NGE4 600 aa3.79□□□□□ -1.8
RNU4ATAC4P-201ENST00000516307 C1QBPQ07021 282 aaKnown RBP3.75□□□□□ -1.81
RNU4ATAC4P-201ENST00000516307 POTEHQ6S545 545 aa3.73□□□□□ -1.81
RNU4ATAC4P-201ENST00000516307 HOXD11P31277 338 aaPredicted RBP3.69□□□□□ -1.82
RNU4ATAC4P-201ENST00000516307 DNAJC5BQ9UF47 199 aa3.61□□□□□ -1.83
RNU4ATAC4P-201ENST00000516307 RNF216Q9NWF9 866 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC4P-201ENST00000516307 PPP4R3CPQ6ZMV5 832 aa3.58□□□□□ -1.84
RNU4ATAC4P-201ENST00000516307 CNKSR2Q8WXI2 1034 aa3.57□□□□□ -1.84
RNU4ATAC4P-201ENST00000516307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU4ATAC4P-201ENST00000516307 DSG3P32926 999 aa3.49□□□□□ -1.85
RNU4ATAC4P-201ENST00000516307 CAPN15O75808 1086 aa3.46□□□□□ -1.86
RNU4ATAC4P-201ENST00000516307 SPINK5Q9NQ38 1064 aaPredicted RBP3.44□□□□□ -1.86
RNU4ATAC4P-201ENST00000516307 U3KPZ7 1027 aaPredicted RBP3.42□□□□□ -1.86
RNU4ATAC4P-201ENST00000516307 NCBP3Q53F19 620 aaKnown RBP3.37□□□□□ -1.87
RNU4ATAC4P-201ENST00000516307 SP7Q8TDD2 431 aaPredicted RBP3.37□□□□□ -1.87
RNU4ATAC4P-201ENST00000516307 CHRDL2Q6WN34 429 aa3.36□□□□□ -1.87
RNU4ATAC4P-201ENST00000516307 ABCB7O75027 752 aa3.35□□□□□ -1.87
RNU4ATAC4P-201ENST00000516307 TRHP20396 242 aaPredicted RBP3.34□□□□□ -1.87
RNU4ATAC4P-201ENST00000516307 RBM42Q9BTD8 480 aaKnown RBP3.34□□□□□ -1.87
RNU4ATAC4P-201ENST00000516307 NPM3O75607 178 aaKnown RBP3.32□□□□□ -1.88
RNU4ATAC4P-201ENST00000516307 ZNF219Q9P2Y4 722 aaPredicted RBP3.32□□□□□ -1.88
RNU4ATAC4P-201ENST00000516307 APLP2Q06481 763 aa3.3□□□□□ -1.88
RNU4ATAC4P-201ENST00000516307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC4P-201ENST00000516307 HAX1O00165 279 aa3.24□□□□□ -1.89
RNU4ATAC4P-201ENST00000516307 HNRNPUL2Q1KMD3 747 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC4P-201ENST00000516307 SLC4A2P04920 1241 aa3.23□□□□□ -1.89
RNU4ATAC4P-201ENST00000516307 PIP4P2Q8N4L2 257 aa3.23□□□□□ -1.89
RNU4ATAC4P-201ENST00000516307 AKT1S1Q96B36 256 aa3.21□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 SAMD1Q6SPF0 538 aaPredicted RBP3.2□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 POLA2Q14181 598 aa3.19□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 EVX2Q03828 476 aa3.18□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 REM2Q8IYK8 340 aaPredicted RBP3.18□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 FXR2P51116 673 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 PLSCR2Q9NRY7 297 aa3.17□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 LHX8Q68G74 356 aa3.16□□□□□ -1.9
RNU4ATAC4P-201ENST00000516307 PITPNM1O00562 1244 aa3.14□□□□□ -1.91
RNU4ATAC4P-201ENST00000516307 ZBTB12Q9Y330 459 aaPredicted RBP3.11□□□□□ -1.91
RNU4ATAC4P-201ENST00000516307 GABBR2O75899 941 aa3.1□□□□□ -1.91
RNU4ATAC4P-201ENST00000516307 OSCARQ8IYS5 282 aa3.09□□□□□ -1.91
RNU4ATAC4P-201ENST00000516307 MYCNP04198 464 aaPredicted RBP3.08□□□□□ -1.92
RNU4ATAC4P-201ENST00000516307 C19orf67A6NJJ6 358 aa3.07□□□□□ -1.92
RNU4ATAC4P-201ENST00000516307 PRKAR2AP13861 404 aaKnown RBP3.06□□□□□ -1.92
RNU4ATAC4P-201ENST00000516307 POTEIP0CG38 1075 aa3.03□□□□□ -1.92
RNU4ATAC4P-201ENST00000516307 KCNA4P22459 653 aa3.03□□□□□ -1.92
RNU4ATAC4P-201ENST00000516307 ATF5Q9Y2D1 282 aaPredicted RBP3.02□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 CLEC11AQ9Y240 323 aa3.01□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 POTEMA6NI47 508 aa3□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 SPDYE1Q8NFV5 336 aaPredicted RBP3□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 SPDYE2BA6NHP3 402 aa2.99□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 SPDYE6P0CI01 402 aa2.99□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 SPDYE2Q495Y8 402 aa2.99□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 CHADLQ6NUI6 762 aa2.98□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 POTEGQ6S5H5 508 aa2.97□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 DCBLD2Q96PD2 775 aa2.97□□□□□ -1.93
RNU4ATAC4P-201ENST00000516307 CLCN6P51797 869 aa2.96□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 OTUD5Q96G74 571 aa2.96□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 PCDH10Q9P2E7 1040 aa2.96□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 CD44P16070 742 aaKnown RBP2.95□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 FBLN2P98095 1184 aa2.93□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 POTEB2H3BUK9 544 aa2.92□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 PRR29P0C7W0 189 aa2.92□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 ZNF692Q9BU19 519 aaPredicted RBP2.91□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 SSUH2Q9Y2M2 353 aa2.91□□□□□ -1.94
RNU4ATAC4P-201ENST00000516307 FOXD4L1Q9NU39 408 aa2.9□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 FARP1Q9Y4F1 1045 aaPredicted RBP2.9□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 ZNF579Q8NAF0 562 aaKnown RBP2.89□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 GALR2O43603 387 aaPredicted RBP2.88□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 ZRANB1Q9UGI0 708 aa2.88□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 MKRN4PQ13434 485 aaPredicted RBP2.87□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 LCE2DQ5TA82 110 aaPredicted RBP2.86□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 PABPN1Q86U42 306 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 FAM163AQ96GL9 167 aaPredicted RBP2.85□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 ATXN8OSP0DMR3 200 aa2.84□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 PELP1Q8IZL8 1130 aaKnown RBP2.84□□□□□ -1.95
RNU4ATAC4P-201ENST00000516307 POTEJP0CG39 1038 aa2.83□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 MAMSTRQ6ZN01 415 aa2.83□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 CDAN1Q8IWY9 1227 aa2.82□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 METRNQ9UJH8 293 aa2.82□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 C7P10643 843 aa2.81□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 SLC39A7Q92504 469 aa2.81□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 SLC4A1APQ9BWU0 796 aaKnown RBP2.81□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 SCUBE2Q9NQ36 999 aa2.81□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 PAK3O75914 559 aaPredicted RBP2.8□□□□□ -1.96
RNU4ATAC4P-201ENST00000516307 ASTLQ6HA08 431 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms