RNA–Protein interactions for RNA: ENST00000516230.1

RNU6-287P-201, Transcript of RNA, U6 small nuclear 287, pseudogene, humanhuman

BASIC

Gene RNU6-287P, Length 98 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-287P-201ENST00000516230 AEBP2Q6ZN18 517 aaPredicted RBP6.93□□□□□ -1.3
RNU6-287P-201ENST00000516230 CHIC1Q5VXU3 224 aa6.52□□□□□ -1.37
RNU6-287P-201ENST00000516230 SENP3Q9H4L4 574 aaPredicted RBP5.99□□□□□ -1.45
RNU6-287P-201ENST00000516230 PHF23Q9BUL5 403 aaPredicted RBP5.88□□□□□ -1.47
RNU6-287P-201ENST00000516230 POTEDQ86YR6 584 aa5.63□□□□□ -1.51
RNU6-287P-201ENST00000516230 FOXD1Q16676 465 aa5.6□□□□□ -1.51
RNU6-287P-201ENST00000516230 MSH5O43196 834 aa5.36□□□□□ -1.55
RNU6-287P-201ENST00000516230 PIAS4Q8N2W9 510 aaPredicted RBP5.17□□□□□ -1.58
RNU6-287P-201ENST00000516230 PPP6R1Q9UPN7 881 aa5.04□□□□□ -1.6
RNU6-287P-201ENST00000516230 ADRA2BP18089 450 aa5.01□□□□□ -1.61
RNU6-287P-201ENST00000516230 PLPPR3Q6T4P5 718 aa5□□□□□ -1.61
RNU6-287P-201ENST00000516230 CACNB1Q02641 598 aaPredicted RBP4.75□□□□□ -1.65
RNU6-287P-201ENST00000516230 DMRT2Q9Y5R5 561 aa4.7□□□□□ -1.66
RNU6-287P-201ENST00000516230 MAPK8IP2Q13387 824 aaPredicted RBP4.68□□□□□ -1.66
RNU6-287P-201ENST00000516230 SCAF1Q9H7N4 1312 aaKnown RBP4.64□□□□□ -1.67
RNU6-287P-201ENST00000516230 DCAF8L1A6NGE4 600 aa4.54□□□□□ -1.68
RNU6-287P-201ENST00000516230 RNF39Q9H2S5 420 aa4.53□□□□□ -1.68
RNU6-287P-201ENST00000516230 C1QBPQ07021 282 aaKnown RBP4.48□□□□□ -1.69
RNU6-287P-201ENST00000516230 HOXD11P31277 338 aaPredicted RBP4.43□□□□□ -1.7
RNU6-287P-201ENST00000516230 POTEHQ6S545 545 aa4.38□□□□□ -1.71
RNU6-287P-201ENST00000516230 DNAJC5BQ9UF47 199 aa4.35□□□□□ -1.71
RNU6-287P-201ENST00000516230 PPP4R3CPQ6ZMV5 832 aa4.34□□□□□ -1.71
RNU6-287P-201ENST00000516230 RNF216Q9NWF9 866 aaPredicted RBP4.34□□□□□ -1.71
RNU6-287P-201ENST00000516230 CNKSR2Q8WXI2 1034 aa4.33□□□□□ -1.72
RNU6-287P-201ENST00000516230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU6-287P-201ENST00000516230 DSG3P32926 999 aa4.16□□□□□ -1.74
RNU6-287P-201ENST00000516230 CAPN15O75808 1086 aa4.14□□□□□ -1.75
RNU6-287P-201ENST00000516230 NCBP3Q53F19 620 aaKnown RBP4.12□□□□□ -1.75
RNU6-287P-201ENST00000516230 SPINK5Q9NQ38 1064 aaPredicted RBP4.1□□□□□ -1.75
RNU6-287P-201ENST00000516230 U3KPZ7 1027 aaPredicted RBP4.09□□□□□ -1.75
RNU6-287P-201ENST00000516230 NPM3O75607 178 aaKnown RBP4.02□□□□□ -1.77
RNU6-287P-201ENST00000516230 TRHP20396 242 aaPredicted RBP4.01□□□□□ -1.77
RNU6-287P-201ENST00000516230 APLP2Q06481 763 aa4.01□□□□□ -1.77
RNU6-287P-201ENST00000516230 ABCB7O75027 752 aa4□□□□□ -1.77
RNU6-287P-201ENST00000516230 RBM42Q9BTD8 480 aaKnown RBP4□□□□□ -1.77
RNU6-287P-201ENST00000516230 CHRDL2Q6WN34 429 aa3.99□□□□□ -1.77
RNU6-287P-201ENST00000516230 ZNF219Q9P2Y4 722 aaPredicted RBP3.99□□□□□ -1.77
RNU6-287P-201ENST00000516230 SP7Q8TDD2 431 aaPredicted RBP3.98□□□□□ -1.77
RNU6-287P-201ENST00000516230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.94□□□□□ -1.78
RNU6-287P-201ENST00000516230 HNRNPUL2Q1KMD3 747 aaKnown RBP3.94□□□□□ -1.78
RNU6-287P-201ENST00000516230 SLC4A2P04920 1241 aa3.89□□□□□ -1.79
RNU6-287P-201ENST00000516230 SAMD1Q6SPF0 538 aaPredicted RBP3.89□□□□□ -1.79
RNU6-287P-201ENST00000516230 HAX1O00165 279 aa3.87□□□□□ -1.79
RNU6-287P-201ENST00000516230 POLA2Q14181 598 aa3.85□□□□□ -1.79
RNU6-287P-201ENST00000516230 AKT1S1Q96B36 256 aa3.85□□□□□ -1.79
RNU6-287P-201ENST00000516230 PIP4P2Q8N4L2 257 aa3.84□□□□□ -1.79
RNU6-287P-201ENST00000516230 REM2Q8IYK8 340 aaPredicted RBP3.81□□□□□ -1.8
RNU6-287P-201ENST00000516230 FXR2P51116 673 aaKnown RBP eCLIP3.79□□□□□ -1.8
RNU6-287P-201ENST00000516230 EVX2Q03828 476 aa3.76□□□□□ -1.81
RNU6-287P-201ENST00000516230 ZBTB12Q9Y330 459 aaPredicted RBP3.76□□□□□ -1.81
RNU6-287P-201ENST00000516230 PITPNM1O00562 1244 aa3.75□□□□□ -1.81
RNU6-287P-201ENST00000516230 LHX8Q68G74 356 aa3.75□□□□□ -1.81
RNU6-287P-201ENST00000516230 MYCNP04198 464 aaPredicted RBP3.73□□□□□ -1.81
RNU6-287P-201ENST00000516230 KCNA4P22459 653 aa3.71□□□□□ -1.82
RNU6-287P-201ENST00000516230 PLSCR2Q9NRY7 297 aa3.71□□□□□ -1.82
RNU6-287P-201ENST00000516230 OSCARQ8IYS5 282 aa3.7□□□□□ -1.82
RNU6-287P-201ENST00000516230 GABBR2O75899 941 aa3.69□□□□□ -1.82
RNU6-287P-201ENST00000516230 C19orf67A6NJJ6 358 aa3.67□□□□□ -1.82
RNU6-287P-201ENST00000516230 PRKAR2AP13861 404 aaKnown RBP3.67□□□□□ -1.82
RNU6-287P-201ENST00000516230 ATF5Q9Y2D1 282 aaPredicted RBP3.65□□□□□ -1.83
RNU6-287P-201ENST00000516230 CLEC11AQ9Y240 323 aa3.63□□□□□ -1.83
RNU6-287P-201ENST00000516230 SPDYE1Q8NFV5 336 aaPredicted RBP3.62□□□□□ -1.83
RNU6-287P-201ENST00000516230 SPDYE2BA6NHP3 402 aa3.61□□□□□ -1.83
RNU6-287P-201ENST00000516230 SPDYE6P0CI01 402 aa3.61□□□□□ -1.83
RNU6-287P-201ENST00000516230 SPDYE2Q495Y8 402 aa3.61□□□□□ -1.83
RNU6-287P-201ENST00000516230 CLCN6P51797 869 aa3.59□□□□□ -1.83
RNU6-287P-201ENST00000516230 POTEIP0CG38 1075 aa3.58□□□□□ -1.84
RNU6-287P-201ENST00000516230 FBLN2P98095 1184 aa3.57□□□□□ -1.84
RNU6-287P-201ENST00000516230 CHADLQ6NUI6 762 aa3.56□□□□□ -1.84
RNU6-287P-201ENST00000516230 FOXD4L1Q9NU39 408 aa3.56□□□□□ -1.84
RNU6-287P-201ENST00000516230 DCBLD2Q96PD2 775 aa3.55□□□□□ -1.84
RNU6-287P-201ENST00000516230 ZNF692Q9BU19 519 aaPredicted RBP3.55□□□□□ -1.84
RNU6-287P-201ENST00000516230 PRR29P0C7W0 189 aa3.54□□□□□ -1.84
RNU6-287P-201ENST00000516230 POTEMA6NI47 508 aa3.53□□□□□ -1.84
RNU6-287P-201ENST00000516230 CD44P16070 742 aaKnown RBP3.53□□□□□ -1.84
RNU6-287P-201ENST00000516230 PCDH10Q9P2E7 1040 aa3.53□□□□□ -1.84
RNU6-287P-201ENST00000516230 POTEGQ6S5H5 508 aa3.51□□□□□ -1.85
RNU6-287P-201ENST00000516230 OTUD5Q96G74 571 aa3.51□□□□□ -1.85
RNU6-287P-201ENST00000516230 SSUH2Q9Y2M2 353 aa3.51□□□□□ -1.85
RNU6-287P-201ENST00000516230 FARP1Q9Y4F1 1045 aaPredicted RBP3.5□□□□□ -1.85
RNU6-287P-201ENST00000516230 ATXN8OSP0DMR3 200 aa3.49□□□□□ -1.85
RNU6-287P-201ENST00000516230 PABPN1Q86U42 306 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU6-287P-201ENST00000516230 SLC4A1APQ9BWU0 796 aaKnown RBP3.47□□□□□ -1.85
RNU6-287P-201ENST00000516230 POTEB2H3BUK9 544 aa3.46□□□□□ -1.86
RNU6-287P-201ENST00000516230 MKRN4PQ13434 485 aaPredicted RBP3.46□□□□□ -1.86
RNU6-287P-201ENST00000516230 ZRANB1Q9UGI0 708 aa3.46□□□□□ -1.86
RNU6-287P-201ENST00000516230 ZNF579Q8NAF0 562 aaKnown RBP3.45□□□□□ -1.86
RNU6-287P-201ENST00000516230 GALR2O43603 387 aaPredicted RBP3.43□□□□□ -1.86
RNU6-287P-201ENST00000516230 MAMSTRQ6ZN01 415 aa3.41□□□□□ -1.86
RNU6-287P-201ENST00000516230 FAM163AQ96GL9 167 aaPredicted RBP3.41□□□□□ -1.86
RNU6-287P-201ENST00000516230 PAK3O75914 559 aaPredicted RBP3.4□□□□□ -1.87
RNU6-287P-201ENST00000516230 PELP1Q8IZL8 1130 aaKnown RBP3.39□□□□□ -1.87
RNU6-287P-201ENST00000516230 ZBTB22O15209 634 aa3.38□□□□□ -1.87
RNU6-287P-201ENST00000516230 C7P10643 843 aa3.38□□□□□ -1.87
RNU6-287P-201ENST00000516230 SLC39A7Q92504 469 aa3.37□□□□□ -1.87
RNU6-287P-201ENST00000516230 METRNQ9UJH8 293 aa3.37□□□□□ -1.87
RNU6-287P-201ENST00000516230 POTEJP0CG39 1038 aa3.36□□□□□ -1.87
RNU6-287P-201ENST00000516230 LCE2DQ5TA82 110 aaPredicted RBP3.36□□□□□ -1.87
RNU6-287P-201ENST00000516230 SCUBE2Q9NQ36 999 aa3.36□□□□□ -1.87
RNU6-287P-201ENST00000516230 CREBZFQ9NS37 354 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms