RNA–Protein interactions for RNA: ENST00000516209.1

RNU2-30P-201, Transcript of RNA, U2 small nuclear 30, pseudogene, humanhuman

BASIC

Gene RNU2-30P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-30P-201ENST00000516209 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
RNU2-30P-201ENST00000516209 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
RNU2-30P-201ENST00000516209 SENP3Q9H4L4 574 aaPredicted RBP21.87■■□□□ 1.09
RNU2-30P-201ENST00000516209 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
RNU2-30P-201ENST00000516209 FOXD1Q16676 465 aa20.32■□□□□ 0.84
RNU2-30P-201ENST00000516209 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
RNU2-30P-201ENST00000516209 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
RNU2-30P-201ENST00000516209 ADRA2BP18089 450 aa19.18■□□□□ 0.66
RNU2-30P-201ENST00000516209 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
RNU2-30P-201ENST00000516209 MSH5O43196 834 aa18.92■□□□□ 0.62
RNU2-30P-201ENST00000516209 POTEDQ86YR6 584 aa17.85■□□□□ 0.45
RNU2-30P-201ENST00000516209 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
RNU2-30P-201ENST00000516209 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
RNU2-30P-201ENST00000516209 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
RNU2-30P-201ENST00000516209 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
RNU2-30P-201ENST00000516209 CNKSR2Q8WXI2 1034 aa17.1■□□□□ 0.33
RNU2-30P-201ENST00000516209 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
RNU2-30P-201ENST00000516209 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
RNU2-30P-201ENST00000516209 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
RNU2-30P-201ENST00000516209 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
RNU2-30P-201ENST00000516209 KCNA4P22459 653 aa16.63■□□□□ 0.25
RNU2-30P-201ENST00000516209 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
RNU2-30P-201ENST00000516209 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
RNU2-30P-201ENST00000516209 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
RNU2-30P-201ENST00000516209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
RNU2-30P-201ENST00000516209 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
RNU2-30P-201ENST00000516209 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.15
RNU2-30P-201ENST00000516209 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
RNU2-30P-201ENST00000516209 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
RNU2-30P-201ENST00000516209 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
RNU2-30P-201ENST00000516209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
RNU2-30P-201ENST00000516209 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
RNU2-30P-201ENST00000516209 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
RNU2-30P-201ENST00000516209 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
RNU2-30P-201ENST00000516209 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
RNU2-30P-201ENST00000516209 APLP2Q06481 763 aa15.4■□□□□ 0.06
RNU2-30P-201ENST00000516209 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
RNU2-30P-201ENST00000516209 CAPN15O75808 1086 aa15.36■□□□□ 0.05
RNU2-30P-201ENST00000516209 ZBTB22O15209 634 aa15.3■□□□□ 0.04
RNU2-30P-201ENST00000516209 DSG3P32926 999 aa15.24■□□□□ 0.03
RNU2-30P-201ENST00000516209 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
RNU2-30P-201ENST00000516209 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
RNU2-30P-201ENST00000516209 ABCB7O75027 752 aa15.02■□□□□ -0
RNU2-30P-201ENST00000516209 ATF5Q9Y2D1 282 aaPredicted RBP15.01□□□□□ -0.01
RNU2-30P-201ENST00000516209 ATXN8OSP0DMR3 200 aa14.99□□□□□ -0.01
RNU2-30P-201ENST00000516209 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
RNU2-30P-201ENST00000516209 POLA2Q14181 598 aa14.89□□□□□ -0.03
RNU2-30P-201ENST00000516209 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
RNU2-30P-201ENST00000516209 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
RNU2-30P-201ENST00000516209 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
RNU2-30P-201ENST00000516209 FBLN2P98095 1184 aa14.41□□□□□ -0.1
RNU2-30P-201ENST00000516209 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
RNU2-30P-201ENST00000516209 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
RNU2-30P-201ENST00000516209 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
RNU2-30P-201ENST00000516209 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
RNU2-30P-201ENST00000516209 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
RNU2-30P-201ENST00000516209 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
RNU2-30P-201ENST00000516209 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
RNU2-30P-201ENST00000516209 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
RNU2-30P-201ENST00000516209 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
RNU2-30P-201ENST00000516209 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
RNU2-30P-201ENST00000516209 POTEHQ6S545 545 aa14.06□□□□□ -0.16
RNU2-30P-201ENST00000516209 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
RNU2-30P-201ENST00000516209 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
RNU2-30P-201ENST00000516209 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
RNU2-30P-201ENST00000516209 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
RNU2-30P-201ENST00000516209 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
RNU2-30P-201ENST00000516209 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
RNU2-30P-201ENST00000516209 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
RNU2-30P-201ENST00000516209 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
RNU2-30P-201ENST00000516209 PROM2Q8N271 834 aa13.63□□□□□ -0.23
RNU2-30P-201ENST00000516209 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
RNU2-30P-201ENST00000516209 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
RNU2-30P-201ENST00000516209 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
RNU2-30P-201ENST00000516209 FKBP8Q14318 412 aa13.46□□□□□ -0.25
RNU2-30P-201ENST00000516209 HAX1O00165 279 aa13.44□□□□□ -0.26
RNU2-30P-201ENST00000516209 CREBZFQ9NS37 354 aa13.4□□□□□ -0.26
RNU2-30P-201ENST00000516209 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
RNU2-30P-201ENST00000516209 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
RNU2-30P-201ENST00000516209 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
RNU2-30P-201ENST00000516209 EVX2Q03828 476 aa13.3□□□□□ -0.28
RNU2-30P-201ENST00000516209 MNX1P50219 401 aaPredicted RBP13.24□□□□□ -0.29
RNU2-30P-201ENST00000516209 CD44P16070 742 aaKnown RBP13.19□□□□□ -0.3
RNU2-30P-201ENST00000516209 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
RNU2-30P-201ENST00000516209 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
RNU2-30P-201ENST00000516209 MIER1Q8N108 512 aa13.14□□□□□ -0.31
RNU2-30P-201ENST00000516209 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
RNU2-30P-201ENST00000516209 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
RNU2-30P-201ENST00000516209 GABBR2O75899 941 aa13.05□□□□□ -0.32
RNU2-30P-201ENST00000516209 CLCN6P51797 869 aa13.04□□□□□ -0.32
RNU2-30P-201ENST00000516209 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
RNU2-30P-201ENST00000516209 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
RNU2-30P-201ENST00000516209 PAK3O75914 559 aaPredicted RBP13.02□□□□□ -0.33
RNU2-30P-201ENST00000516209 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
RNU2-30P-201ENST00000516209 VASPP50552 380 aaPredicted RBP12.96□□□□□ -0.33
RNU2-30P-201ENST00000516209 RASEFQ8IZ41 740 aa12.9□□□□□ -0.34
RNU2-30P-201ENST00000516209 NUBP1P53384 320 aa12.88□□□□□ -0.35
RNU2-30P-201ENST00000516209 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
RNU2-30P-201ENST00000516209 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
RNU2-30P-201ENST00000516209 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms