RNA–Protein interactions for RNA: ENST00000516125.1

RNU6-1143P-201, Transcript of RNA, U6 small nuclear 1143, pseudogene, humanhuman

BASIC

Gene RNU6-1143P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1143P-201ENST00000516125 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
RNU6-1143P-201ENST00000516125 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
RNU6-1143P-201ENST00000516125 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
RNU6-1143P-201ENST00000516125 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
RNU6-1143P-201ENST00000516125 FOXD1Q16676 465 aa16.51■□□□□ 0.23
RNU6-1143P-201ENST00000516125 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
RNU6-1143P-201ENST00000516125 MSH5O43196 834 aa15.65■□□□□ 0.1
RNU6-1143P-201ENST00000516125 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
RNU6-1143P-201ENST00000516125 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
RNU6-1143P-201ENST00000516125 PPP6R1Q9UPN7 881 aa15.16■□□□□ 0.02
RNU6-1143P-201ENST00000516125 ADRA2BP18089 450 aa15.08■□□□□ 0
RNU6-1143P-201ENST00000516125 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
RNU6-1143P-201ENST00000516125 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
RNU6-1143P-201ENST00000516125 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.19
RNU6-1143P-201ENST00000516125 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
RNU6-1143P-201ENST00000516125 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
RNU6-1143P-201ENST00000516125 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
RNU6-1143P-201ENST00000516125 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
RNU6-1143P-201ENST00000516125 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
RNU6-1143P-201ENST00000516125 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
RNU6-1143P-201ENST00000516125 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
RNU6-1143P-201ENST00000516125 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
RNU6-1143P-201ENST00000516125 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
RNU6-1143P-201ENST00000516125 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
RNU6-1143P-201ENST00000516125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.37
RNU6-1143P-201ENST00000516125 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
RNU6-1143P-201ENST00000516125 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
RNU6-1143P-201ENST00000516125 POTEHQ6S545 545 aa12.33□□□□□ -0.44
RNU6-1143P-201ENST00000516125 DSG3P32926 999 aa12.32□□□□□ -0.44
RNU6-1143P-201ENST00000516125 CAPN15O75808 1086 aa12.3□□□□□ -0.44
RNU6-1143P-201ENST00000516125 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
RNU6-1143P-201ENST00000516125 APLP2Q06481 763 aa12.08□□□□□ -0.48
RNU6-1143P-201ENST00000516125 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
RNU6-1143P-201ENST00000516125 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
RNU6-1143P-201ENST00000516125 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
RNU6-1143P-201ENST00000516125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
RNU6-1143P-201ENST00000516125 HNRNPUL2Q1KMD3 747 aaKnown RBP11.99□□□□□ -0.49
RNU6-1143P-201ENST00000516125 ABCB7O75027 752 aa11.96□□□□□ -0.49
RNU6-1143P-201ENST00000516125 KCNA4P22459 653 aa11.96□□□□□ -0.49
RNU6-1143P-201ENST00000516125 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
RNU6-1143P-201ENST00000516125 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
RNU6-1143P-201ENST00000516125 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
RNU6-1143P-201ENST00000516125 POLA2Q14181 598 aa11.63□□□□□ -0.55
RNU6-1143P-201ENST00000516125 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
RNU6-1143P-201ENST00000516125 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
RNU6-1143P-201ENST00000516125 ZBTB12Q9Y330 459 aaPredicted RBP11.43□□□□□ -0.58
RNU6-1143P-201ENST00000516125 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
RNU6-1143P-201ENST00000516125 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
RNU6-1143P-201ENST00000516125 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
RNU6-1143P-201ENST00000516125 ATF5Q9Y2D1 282 aaPredicted RBP11.31□□□□□ -0.6
RNU6-1143P-201ENST00000516125 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
RNU6-1143P-201ENST00000516125 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
RNU6-1143P-201ENST00000516125 SLC4A1APQ9BWU0 796 aaKnown RBP11.25□□□□□ -0.61
RNU6-1143P-201ENST00000516125 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
RNU6-1143P-201ENST00000516125 HAX1O00165 279 aa11.18□□□□□ -0.62
RNU6-1143P-201ENST00000516125 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
RNU6-1143P-201ENST00000516125 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
RNU6-1143P-201ENST00000516125 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
RNU6-1143P-201ENST00000516125 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
RNU6-1143P-201ENST00000516125 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
RNU6-1143P-201ENST00000516125 EVX2Q03828 476 aa10.98□□□□□ -0.65
RNU6-1143P-201ENST00000516125 ZBTB22O15209 634 aa10.97□□□□□ -0.65
RNU6-1143P-201ENST00000516125 FBLN2P98095 1184 aa10.97□□□□□ -0.65
RNU6-1143P-201ENST00000516125 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
RNU6-1143P-201ENST00000516125 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
RNU6-1143P-201ENST00000516125 CLEC11AQ9Y240 323 aa10.87□□□□□ -0.67
RNU6-1143P-201ENST00000516125 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
RNU6-1143P-201ENST00000516125 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
RNU6-1143P-201ENST00000516125 ZNF692Q9BU19 519 aaPredicted RBP10.81□□□□□ -0.68
RNU6-1143P-201ENST00000516125 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1143P-201ENST00000516125 GABBR2O75899 941 aa10.75□□□□□ -0.69
RNU6-1143P-201ENST00000516125 LHX8Q68G74 356 aa10.69□□□□□ -0.7
RNU6-1143P-201ENST00000516125 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
RNU6-1143P-201ENST00000516125 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
RNU6-1143P-201ENST00000516125 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
RNU6-1143P-201ENST00000516125 CLCN6P51797 869 aa10.56□□□□□ -0.72
RNU6-1143P-201ENST00000516125 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
RNU6-1143P-201ENST00000516125 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
RNU6-1143P-201ENST00000516125 POTEIP0CG38 1075 aa10.49□□□□□ -0.73
RNU6-1143P-201ENST00000516125 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
RNU6-1143P-201ENST00000516125 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
RNU6-1143P-201ENST00000516125 ZRANB1Q9UGI0 708 aa10.34□□□□□ -0.75
RNU6-1143P-201ENST00000516125 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
RNU6-1143P-201ENST00000516125 CREBZFQ9NS37 354 aa10.3□□□□□ -0.76
RNU6-1143P-201ENST00000516125 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
RNU6-1143P-201ENST00000516125 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
RNU6-1143P-201ENST00000516125 PAK3O75914 559 aaPredicted RBP10.22□□□□□ -0.77
RNU6-1143P-201ENST00000516125 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
RNU6-1143P-201ENST00000516125 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
RNU6-1143P-201ENST00000516125 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
RNU6-1143P-201ENST00000516125 POTEB2H3BUK9 544 aa10.14□□□□□ -0.79
RNU6-1143P-201ENST00000516125 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
RNU6-1143P-201ENST00000516125 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
RNU6-1143P-201ENST00000516125 MNX1P50219 401 aaPredicted RBP10.08□□□□□ -0.8
RNU6-1143P-201ENST00000516125 POTEMA6NI47 508 aa10.07□□□□□ -0.8
RNU6-1143P-201ENST00000516125 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
RNU6-1143P-201ENST00000516125 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1143P-201ENST00000516125 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
RNU6-1143P-201ENST00000516125 C7P10643 843 aa10.02□□□□□ -0.81
RNU6-1143P-201ENST00000516125 SLC39A7Q92504 469 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms