RNA–Protein interactions for RNA: ENST00000516016.1

RN7SKP19-201, Transcript of RNA, 7SK small nuclear pseudogene 19, humanhuman

BASIC

Gene RN7SKP19, Length 252 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP19-201ENST00000516016 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
RN7SKP19-201ENST00000516016 CHIC1Q5VXU3 224 aa12.9□□□□□ -0.34
RN7SKP19-201ENST00000516016 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP19-201ENST00000516016 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
RN7SKP19-201ENST00000516016 FOXD1Q16676 465 aa11.1□□□□□ -0.63
RN7SKP19-201ENST00000516016 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
RN7SKP19-201ENST00000516016 MSH5O43196 834 aa10.5□□□□□ -0.73
RN7SKP19-201ENST00000516016 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
RN7SKP19-201ENST00000516016 PPP6R1Q9UPN7 881 aa10.12□□□□□ -0.79
RN7SKP19-201ENST00000516016 ADRA2BP18089 450 aa10.06□□□□□ -0.8
RN7SKP19-201ENST00000516016 PLPPR3Q6T4P5 718 aa10.04□□□□□ -0.8
RN7SKP19-201ENST00000516016 MAPK8IP2Q13387 824 aaPredicted RBP9.36□□□□□ -0.91
RN7SKP19-201ENST00000516016 DMRT2Q9Y5R5 561 aa9.34□□□□□ -0.91
RN7SKP19-201ENST00000516016 CACNB1Q02641 598 aaPredicted RBP9.25□□□□□ -0.93
RN7SKP19-201ENST00000516016 SCAF1Q9H7N4 1312 aaKnown RBP9.18□□□□□ -0.94
RN7SKP19-201ENST00000516016 DCAF8L1A6NGE4 600 aa8.99□□□□□ -0.97
RN7SKP19-201ENST00000516016 RNF39Q9H2S5 420 aa8.94□□□□□ -0.98
RN7SKP19-201ENST00000516016 HOXD11P31277 338 aaPredicted RBP8.85□□□□□ -0.99
RN7SKP19-201ENST00000516016 C1QBPQ07021 282 aaKnown RBP8.78□□□□□ -1
RN7SKP19-201ENST00000516016 PPP4R3CPQ6ZMV5 832 aa8.77□□□□□ -1.01
RN7SKP19-201ENST00000516016 CNKSR2Q8WXI2 1034 aa8.68□□□□□ -1.02
RN7SKP19-201ENST00000516016 RNF216Q9NWF9 866 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP19-201ENST00000516016 DNAJC5BQ9UF47 199 aa8.59□□□□□ -1.03
RN7SKP19-201ENST00000516016 POTEHQ6S545 545 aa8.45□□□□□ -1.06
RN7SKP19-201ENST00000516016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.06
RN7SKP19-201ENST00000516016 NCBP3Q53F19 620 aaKnown RBP8.3□□□□□ -1.08
RN7SKP19-201ENST00000516016 DSG3P32926 999 aa8.26□□□□□ -1.09
RN7SKP19-201ENST00000516016 CAPN15O75808 1086 aa8.22□□□□□ -1.09
RN7SKP19-201ENST00000516016 SPINK5Q9NQ38 1064 aaPredicted RBP8.22□□□□□ -1.09
RN7SKP19-201ENST00000516016 U3KPZ7 1027 aaPredicted RBP8.22□□□□□ -1.09
RN7SKP19-201ENST00000516016 NPM3O75607 178 aaKnown RBP8.2□□□□□ -1.1
RN7SKP19-201ENST00000516016 ABCB7O75027 752 aa8.01□□□□□ -1.13
RN7SKP19-201ENST00000516016 TRHP20396 242 aaPredicted RBP8.01□□□□□ -1.13
RN7SKP19-201ENST00000516016 ZNF219Q9P2Y4 722 aaPredicted RBP7.94□□□□□ -1.14
RN7SKP19-201ENST00000516016 SLC4A2P04920 1241 aa7.93□□□□□ -1.14
RN7SKP19-201ENST00000516016 APLP2Q06481 763 aa7.92□□□□□ -1.14
RN7SKP19-201ENST00000516016 RBM42Q9BTD8 480 aaKnown RBP7.86□□□□□ -1.15
RN7SKP19-201ENST00000516016 CHRDL2Q6WN34 429 aa7.85□□□□□ -1.15
RN7SKP19-201ENST00000516016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.84□□□□□ -1.15
RN7SKP19-201ENST00000516016 HNRNPUL2Q1KMD3 747 aaKnown RBP7.84□□□□□ -1.15
RN7SKP19-201ENST00000516016 SAMD1Q6SPF0 538 aaPredicted RBP7.79□□□□□ -1.16
RN7SKP19-201ENST00000516016 SP7Q8TDD2 431 aaPredicted RBP7.75□□□□□ -1.17
RN7SKP19-201ENST00000516016 KCNA4P22459 653 aa7.74□□□□□ -1.17
RN7SKP19-201ENST00000516016 POLA2Q14181 598 aa7.71□□□□□ -1.18
RN7SKP19-201ENST00000516016 AKT1S1Q96B36 256 aa7.61□□□□□ -1.19
RN7SKP19-201ENST00000516016 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
RN7SKP19-201ENST00000516016 MYCNP04198 464 aaPredicted RBP7.58□□□□□ -1.2
RN7SKP19-201ENST00000516016 HAX1O00165 279 aa7.56□□□□□ -1.2
RN7SKP19-201ENST00000516016 REM2Q8IYK8 340 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP19-201ENST00000516016 FXR2P51116 673 aaKnown RBP eCLIP7.49□□□□□ -1.21
RN7SKP19-201ENST00000516016 ZBTB12Q9Y330 459 aaPredicted RBP7.49□□□□□ -1.21
RN7SKP19-201ENST00000516016 PITPNM1O00562 1244 aa7.48□□□□□ -1.21
RN7SKP19-201ENST00000516016 OSCARQ8IYS5 282 aa7.47□□□□□ -1.21
RN7SKP19-201ENST00000516016 ATF5Q9Y2D1 282 aaPredicted RBP7.47□□□□□ -1.21
RN7SKP19-201ENST00000516016 EVX2Q03828 476 aa7.46□□□□□ -1.22
RN7SKP19-201ENST00000516016 FOXD4L1Q9NU39 408 aa7.31□□□□□ -1.24
RN7SKP19-201ENST00000516016 PRKAR2AP13861 404 aaKnown RBP7.29□□□□□ -1.24
RN7SKP19-201ENST00000516016 LHX8Q68G74 356 aa7.28□□□□□ -1.24
RN7SKP19-201ENST00000516016 C19orf67A6NJJ6 358 aa7.26□□□□□ -1.25
RN7SKP19-201ENST00000516016 GABBR2O75899 941 aa7.25□□□□□ -1.25
RN7SKP19-201ENST00000516016 SPDYE2BA6NHP3 402 aa7.24□□□□□ -1.25
RN7SKP19-201ENST00000516016 SPDYE6P0CI01 402 aa7.24□□□□□ -1.25
RN7SKP19-201ENST00000516016 SPDYE2Q495Y8 402 aa7.24□□□□□ -1.25
RN7SKP19-201ENST00000516016 CLEC11AQ9Y240 323 aa7.23□□□□□ -1.25
RN7SKP19-201ENST00000516016 SLC4A1APQ9BWU0 796 aaKnown RBP7.22□□□□□ -1.25
RN7SKP19-201ENST00000516016 SPDYE1Q8NFV5 336 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP19-201ENST00000516016 FBLN2P98095 1184 aa7.17□□□□□ -1.26
RN7SKP19-201ENST00000516016 CHADLQ6NUI6 762 aa7.14□□□□□ -1.27
RN7SKP19-201ENST00000516016 ZNF692Q9BU19 519 aaPredicted RBP7.12□□□□□ -1.27
RN7SKP19-201ENST00000516016 PLSCR2Q9NRY7 297 aa7.12□□□□□ -1.27
RN7SKP19-201ENST00000516016 ZBTB22O15209 634 aa7.11□□□□□ -1.27
RN7SKP19-201ENST00000516016 ATXN8OSP0DMR3 200 aa7.11□□□□□ -1.27
RN7SKP19-201ENST00000516016 SSUH2Q9Y2M2 353 aa7.11□□□□□ -1.27
RN7SKP19-201ENST00000516016 POTEIP0CG38 1075 aa7.1□□□□□ -1.27
RN7SKP19-201ENST00000516016 MKRN4PQ13434 485 aaPredicted RBP7.09□□□□□ -1.27
RN7SKP19-201ENST00000516016 PRR29P0C7W0 189 aa7.06□□□□□ -1.28
RN7SKP19-201ENST00000516016 CD44P16070 742 aaKnown RBP7.03□□□□□ -1.28
RN7SKP19-201ENST00000516016 PABPN1Q86U42 306 aaKnown RBP eCLIP7□□□□□ -1.29
RN7SKP19-201ENST00000516016 CLCN6P51797 869 aa6.98□□□□□ -1.29
RN7SKP19-201ENST00000516016 FARP1Q9Y4F1 1045 aaPredicted RBP6.98□□□□□ -1.29
RN7SKP19-201ENST00000516016 DCBLD2Q96PD2 775 aa6.97□□□□□ -1.29
RN7SKP19-201ENST00000516016 OTUD5Q96G74 571 aa6.9□□□□□ -1.3
RN7SKP19-201ENST00000516016 ZNF579Q8NAF0 562 aaKnown RBP6.89□□□□□ -1.31
RN7SKP19-201ENST00000516016 ZRANB1Q9UGI0 708 aa6.89□□□□□ -1.31
RN7SKP19-201ENST00000516016 POTEMA6NI47 508 aa6.87□□□□□ -1.31
RN7SKP19-201ENST00000516016 POTEB2H3BUK9 544 aa6.87□□□□□ -1.31
RN7SKP19-201ENST00000516016 GALR2O43603 387 aaPredicted RBP6.85□□□□□ -1.31
RN7SKP19-201ENST00000516016 POTEGQ6S5H5 508 aa6.84□□□□□ -1.31
RN7SKP19-201ENST00000516016 CREBZFQ9NS37 354 aa6.8□□□□□ -1.32
RN7SKP19-201ENST00000516016 PELP1Q8IZL8 1130 aaKnown RBP6.77□□□□□ -1.33
RN7SKP19-201ENST00000516016 PHF12Q96QT6 1004 aa6.76□□□□□ -1.33
RN7SKP19-201ENST00000516016 PCDH10Q9P2E7 1040 aa6.76□□□□□ -1.33
RN7SKP19-201ENST00000516016 PAK3O75914 559 aaPredicted RBP6.73□□□□□ -1.33
RN7SKP19-201ENST00000516016 POTEJP0CG39 1038 aa6.71□□□□□ -1.34
RN7SKP19-201ENST00000516016 STAG3Q9UJ98 1225 aa6.71□□□□□ -1.34
RN7SKP19-201ENST00000516016 METRNQ9UJH8 293 aa6.69□□□□□ -1.34
RN7SKP19-201ENST00000516016 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
RN7SKP19-201ENST00000516016 C7P10643 843 aa6.67□□□□□ -1.34
RN7SKP19-201ENST00000516016 ASTLQ6HA08 431 aaPredicted RBP6.67□□□□□ -1.34
RN7SKP19-201ENST00000516016 FAM163AQ96GL9 167 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms