RNA–Protein interactions for RNA: ENST00000515749.1

SEC31A-241, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-241ENST00000515749 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
SEC31A-241ENST00000515749 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
SEC31A-241ENST00000515749 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
SEC31A-241ENST00000515749 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
SEC31A-241ENST00000515749 FOXD1Q16676 465 aa17.38■□□□□ 0.37
SEC31A-241ENST00000515749 NISCHQ9Y2I1 1504 aa16.92■□□□□ 0.3
SEC31A-241ENST00000515749 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
SEC31A-241ENST00000515749 POTEDQ86YR6 584 aa16.38■□□□□ 0.21
SEC31A-241ENST00000515749 PIAS4Q8N2W9 510 aaPredicted RBP16.33■□□□□ 0.2
SEC31A-241ENST00000515749 ADRA2BP18089 450 aa16.3■□□□□ 0.2
SEC31A-241ENST00000515749 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
SEC31A-241ENST00000515749 MSH5O43196 834 aa16.24■□□□□ 0.19
SEC31A-241ENST00000515749 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
SEC31A-241ENST00000515749 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
SEC31A-241ENST00000515749 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
SEC31A-241ENST00000515749 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
SEC31A-241ENST00000515749 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
SEC31A-241ENST00000515749 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
SEC31A-241ENST00000515749 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
SEC31A-241ENST00000515749 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
SEC31A-241ENST00000515749 ZCCHC6Q5VYS8 1495 aaKnown RBP14.2□□□□□ -0.14
SEC31A-241ENST00000515749 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
SEC31A-241ENST00000515749 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
SEC31A-241ENST00000515749 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
SEC31A-241ENST00000515749 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
SEC31A-241ENST00000515749 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
SEC31A-241ENST00000515749 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
SEC31A-241ENST00000515749 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
SEC31A-241ENST00000515749 ABCC9O60706 1549 aa13.85□□□□□ -0.19
SEC31A-241ENST00000515749 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
SEC31A-241ENST00000515749 NACADO15069 1562 aa13.8□□□□□ -0.2
SEC31A-241ENST00000515749 KCNA4P22459 653 aa13.73□□□□□ -0.21
SEC31A-241ENST00000515749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.221e-29■□□□□ 9.6
SEC31A-241ENST00000515749 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
SEC31A-241ENST00000515749 SHROOM4Q9ULL8 1493 aa13.65□□□□□ -0.22
SEC31A-241ENST00000515749 C1QBPQ07021 282 aaKnown RBP13.63□□□□□ -0.23
SEC31A-241ENST00000515749 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
SEC31A-241ENST00000515749 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
SEC31A-241ENST00000515749 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
SEC31A-241ENST00000515749 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
SEC31A-241ENST00000515749 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
SEC31A-241ENST00000515749 CAPN15O75808 1086 aa13.21□□□□□ -0.29
SEC31A-241ENST00000515749 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
SEC31A-241ENST00000515749 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
SEC31A-241ENST00000515749 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
SEC31A-241ENST00000515749 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
SEC31A-241ENST00000515749 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
SEC31A-241ENST00000515749 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
SEC31A-241ENST00000515749 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
SEC31A-241ENST00000515749 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
SEC31A-241ENST00000515749 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
SEC31A-241ENST00000515749 SMARCA4P51532 1647 aa13.01□□□□□ -0.33
SEC31A-241ENST00000515749 APLP2Q06481 763 aa13□□□□□ -0.33
SEC31A-241ENST00000515749 SLC4A1APQ9BWU0 796 aaKnown RBP13□□□□□ -0.33
SEC31A-241ENST00000515749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
SEC31A-241ENST00000515749 DSG3P32926 999 aa12.99□□□□□ -0.33
SEC31A-241ENST00000515749 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
SEC31A-241ENST00000515749 ABCB7O75027 752 aa12.93□□□□□ -0.34
SEC31A-241ENST00000515749 WIZO95785 1651 aa12.93□□□□□ -0.34
SEC31A-241ENST00000515749 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
SEC31A-241ENST00000515749 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
SEC31A-241ENST00000515749 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.35
SEC31A-241ENST00000515749 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
SEC31A-241ENST00000515749 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.35
SEC31A-241ENST00000515749 SMARCA2P51531 1590 aa12.83□□□□□ -0.36
SEC31A-241ENST00000515749 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
SEC31A-241ENST00000515749 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
SEC31A-241ENST00000515749 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
SEC31A-241ENST00000515749 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
SEC31A-241ENST00000515749 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
SEC31A-241ENST00000515749 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
SEC31A-241ENST00000515749 POTEHQ6S545 545 aa12.68□□□□□ -0.38
SEC31A-241ENST00000515749 CCDC88BA6NC98 1476 aa12.67□□□□□ -0.38
SEC31A-241ENST00000515749 POLA2Q14181 598 aa12.62□□□□□ -0.39
SEC31A-241ENST00000515749 ZBTB22O15209 634 aa12.6□□□□□ -0.39
SEC31A-241ENST00000515749 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
SEC31A-241ENST00000515749 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
SEC31A-241ENST00000515749 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
SEC31A-241ENST00000515749 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
SEC31A-241ENST00000515749 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
SEC31A-241ENST00000515749 CFTRP13569 1480 aa12.41□□□□□ -0.42
SEC31A-241ENST00000515749 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
SEC31A-241ENST00000515749 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
SEC31A-241ENST00000515749 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
SEC31A-241ENST00000515749 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
SEC31A-241ENST00000515749 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
SEC31A-241ENST00000515749 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
SEC31A-241ENST00000515749 TOP2BQ02880 1626 aa12.27□□□□□ -0.44
SEC31A-241ENST00000515749 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.44
SEC31A-241ENST00000515749 EEA1Q15075 1411 aa12.27□□□□□ -0.45
SEC31A-241ENST00000515749 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
SEC31A-241ENST00000515749 SYNJ1O43426 1573 aa12.25□□□□□ -0.45
SEC31A-241ENST00000515749 FANCD2Q9BXW9 1451 aa12.2□□□□□ -0.46
SEC31A-241ENST00000515749 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
SEC31A-241ENST00000515749 CUX1P39880 1505 aa12.18□□□□□ -0.46
SEC31A-241ENST00000515749 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.46
SEC31A-241ENST00000515749 NESP48681 1621 aa12.15□□□□□ -0.47
SEC31A-241ENST00000515749 LOC105371045A0A1W2PR82 267 aa12.14□□□□□ -0.47
SEC31A-241ENST00000515749 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
SEC31A-241ENST00000515749 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms