RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	CHIC1	Q5VXU3	224 aa		10.24	□□□□□ -0.77
SLC38A9-223	ENST00000515629	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.09	□□□□□ -0.79
SLC38A9-223	ENST00000515629	PHF23	Q9BUL5	403 aa	Predicted RBP	9.04	□□□□□ -0.96
SLC38A9-223	ENST00000515629	SLC24A1	O60721	1099 aa		8.92	□□□□□ -0.98
SLC38A9-223	ENST00000515629	NISCH	Q9Y2I1	1504 aa		8.53	□□□□□ -1.04
SLC38A9-223	ENST00000515629	EHMT2	Q96KQ7	1210 aa		8.52	□□□□□ -1.05
SLC38A9-223	ENST00000515629	POTED	Q86YR6	584 aa		8.49	□□□□□ -1.05
SLC38A9-223	ENST00000515629	SENP3	Q9H4L4	574 aa	Predicted RBP	8.49	□□□□□ -1.05
SLC38A9-223	ENST00000515629	PLPPR3	Q6T4P5	718 aa		8.46	□□□□□ -1.06
SLC38A9-223	ENST00000515629	RTN4	Q9NQC3	1192 aa	Known RBP	8.13	□□□□□ -1.11
SLC38A9-223	ENST00000515629	DAXX	Q9UER7	740 aa	Predicted RBP	7.98	□□□□□ -1.13
SLC38A9-223	ENST00000515629	AMER1	Q5JTC6	1135 aa	Predicted RBP	7.92	□□□□□ -1.14
SLC38A9-223	ENST00000515629	NCBP3	Q53F19	620 aa	Known RBP	7.92	□□□□□ -1.14
SLC38A9-223	ENST00000515629	KCNA4	P22459	653 aa		7.87	□□□□□ -1.15
SLC38A9-223	ENST00000515629	CSRNP3	Q8WYN3	585 aa		7.87	□□□□□ -1.15
SLC38A9-223	ENST00000515629	ADRA2B	P18089	450 aa		7.87	□□□□□ -1.15
SLC38A9-223	ENST00000515629	FOXD1	Q16676	465 aa		7.83	□□□□□ -1.16
SLC38A9-223	ENST00000515629	PPP6R1	Q9UPN7	881 aa		7.82	□□□□□ -1.16
SLC38A9-223	ENST00000515629	ABCC9	O60706	1549 aa		7.79	□□□□□ -1.16
SLC38A9-223	ENST00000515629	PRKCSH	P14314	528 aa	Predicted RBP	7.75	□□□□□ -1.17
SLC38A9-223	ENST00000515629	CCDC180	Q9P1Z9	1646 aa		7.66	□□□□□ -1.18
SLC38A9-223	ENST00000515629	TIMELESS	Q9UNS1	1208 aa		7.57	□□□□□ -1.2
SLC38A9-223	ENST00000515629	ARX	Q96QS3	562 aa		7.56	□□□□□ -1.2
SLC38A9-223	ENST00000515629	SLC4A1AP	Q9BWU0	796 aa	Known RBP	7.51	□□□□□ -1.21
SLC38A9-223	ENST00000515629	TAOK2	Q9UL54	1235 aa		7.49	□□□□□ -1.21
SLC38A9-223	ENST00000515629	PPP4R3CP	Q6ZMV5	832 aa		7.48	□□□□□ -1.21
SLC38A9-223	ENST00000515629	TULP1	O00294	542 aa	Predicted RBP	7.48	□□□□□ -1.21
SLC38A9-223	ENST00000515629	APLP2	Q06481	763 aa		7.44	□□□□□ -1.22
SLC38A9-223	ENST00000515629	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.42	□□□□□ -1.22
SLC38A9-223	ENST00000515629	TTBK1	Q5TCY1	1321 aa	Predicted RBP	7.42	□□□□□ -1.22
SLC38A9-223	ENST00000515629	PELP1	Q8IZL8	1130 aa	Known RBP	7.42	□□□□□ -1.22
SLC38A9-223	ENST00000515629	BCAN	Q96GW7	911 aa		7.41	□□□□□ -1.22
SLC38A9-223	ENST00000515629	DNAJC5B	Q9UF47	199 aa		7.41	□□□□□ -1.22
SLC38A9-223	ENST00000515629	TPRN	Q4KMQ1	711 aa		7.4	□□□□□ -1.23
SLC38A9-223	ENST00000515629	RANGAP1	P46060	587 aa	Predicted RBP	7.39	□□□□□ -1.23
SLC38A9-223	ENST00000515629	ERICH6	Q7L0X2	663 aa		7.38	□□□□□ -1.23
SLC38A9-223	ENST00000515629	HOMEZ	Q8IX15	550 aa		7.35	□□□□□ -1.23
SLC38A9-223	ENST00000515629	RB1CC1	Q8TDY2	1594 aa		7.35	□□□□□ -1.23
SLC38A9-223	ENST00000515629	MYT1	Q01538	1121 aa		7.34	□□□□□ -1.23
SLC38A9-223	ENST00000515629	MSH5	O43196	834 aa		7.32	□□□□□ -1.24
SLC38A9-223	ENST00000515629	PLCB2	Q00722	1185 aa		7.31	□□□□□ -1.24
SLC38A9-223	ENST00000515629	NPM3	O75607	178 aa	Known RBP	7.3	□□□□□ -1.24
SLC38A9-223	ENST00000515629	NACAD	O15069	1562 aa		7.28	□□□□□ -1.24
SLC38A9-223	ENST00000515629	DCAF8L2	P0C7V8	631 aa		7.27	□□□□□ -1.25
SLC38A9-223	ENST00000515629	HAP1	P54257	671 aa	Predicted RBP	7.27	□□□□□ -1.25
SLC38A9-223	ENST00000515629	PABPN1	Q86U42	306 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
SLC38A9-223	ENST00000515629	PODXL2	Q9NZ53	605 aa		7.25	□□□□□ -1.25
SLC38A9-223	ENST00000515629	ZBTB22	O15209	634 aa		7.23	□□□□□ -1.25
SLC38A9-223	ENST00000515629	KLHL34	Q8N239	644 aa		7.22	□□□□□ -1.25
SLC38A9-223	ENST00000515629	GTF3C3	Q9Y5Q9	886 aa		7.22	□□□□□ -1.25
SLC38A9-223	ENST00000515629	CNKSR2	Q8WXI2	1034 aa		7.22	□□□□□ -1.25
SLC38A9-223	ENST00000515629	UNC13A	Q9UPW8	1703 aa		7.17	□□□□□ -1.26
SLC38A9-223	ENST00000515629	SCAF1	Q9H7N4	1312 aa	Known RBP	7.15	□□□□□ -1.26
SLC38A9-223	ENST00000515629	BICRA	Q9NZM4	1560 aa		7.15	□□□□□ -1.26
SLC38A9-223	ENST00000515629	MYO15B	Q96JP2	1530 aa		7.15	□□□□□ -1.26
SLC38A9-223	ENST00000515629	FKBP8	Q14318	412 aa		7.09	□□□□□ -1.27
SLC38A9-223	ENST00000515629	EIF5B	O60841	1220 aa	Known RBP	7.06	□□□□□ -1.28
SLC38A9-223	ENST00000515629	TMEM132A	Q24JP5	1023 aa		7.05	□□□□□ -1.28
SLC38A9-223	ENST00000515629	NPM2	Q86SE8	214 aa	Known RBP	7.05	□□□□□ -1.28
SLC38A9-223	ENST00000515629	ZCCHC6	Q5VYS8	1495 aa	Known RBP	7.05	□□□□□ -1.28
SLC38A9-223	ENST00000515629	C14orf37	Q86TY3	774 aa		7.04	□□□□□ -1.28
SLC38A9-223	ENST00000515629	VSIG10	Q8N0Z9	540 aa		7.03	□□□□□ -1.28
SLC38A9-223	ENST00000515629	DCAF1	Q9Y4B6	1507 aa		7.02	□□□□□ -1.29
SLC38A9-223	ENST00000515629	FOXD4L1	Q9NU39	408 aa		7.02	□□□□□ -1.29
SLC38A9-223	ENST00000515629	CECR2	Q9BXF3	1484 aa		7.02	□□□□□ -1.29
SLC38A9-223	ENST00000515629	SHROOM4	Q9ULL8	1493 aa		7.02	□□□□□ -1.29
SLC38A9-223	ENST00000515629	CC2D2A	Q9P2K1	1620 aa		7.02	□□□□□ -1.29
SLC38A9-223	ENST00000515629	RNF216	Q9NWF9	866 aa	Predicted RBP	7	□□□□□ -1.29
SLC38A9-223	ENST00000515629	SCRIB	Q14160	1630 aa		6.99	□□□□□ -1.29
SLC38A9-223	ENST00000515629	EIF4G1	Q04637	1599 aa	Known RBP	6.98	□□□□□ -1.29
SLC38A9-223	ENST00000515629	KDM2A	Q9Y2K7	1162 aa		6.98	□□□□□ -1.29
SLC38A9-223	ENST00000515629	MAPK8IP2	Q13387	824 aa	Predicted RBP	6.96	□□□□□ -1.3
SLC38A9-223	ENST00000515629	FBLN2	P98095	1184 aa		6.95	□□□□□ -1.3
SLC38A9-223	ENST00000515629	SUPT5H	O00267	1087 aa	Known RBP	6.94	□□□□□ -1.3
SLC38A9-223	ENST00000515629	TRIM26	Q12899	539 aa	Predicted RBP	6.92	□□□□□ -1.3
SLC38A9-223	ENST00000515629	HOXD11	P31277	338 aa	Predicted RBP	6.9	□□□□□ -1.31
SLC38A9-223	ENST00000515629	CACNB1	Q02641	598 aa	Predicted RBP	6.9	□□□□□ -1.31
SLC38A9-223	ENST00000515629	FBXO3	Q9UK99	471 aa		6.89	□□□□□ -1.31
SLC38A9-223	ENST00000515629	DMRT2	Q9Y5R5	561 aa		6.86	□□□□□ -1.31
SLC38A9-223	ENST00000515629	UBTF	P17480	764 aa	Known RBP	6.86	□□□□□ -1.31
SLC38A9-223	ENST00000515629	DNAJC5	Q9H3Z4	198 aa		6.85	□□□□□ -1.31
SLC38A9-223	ENST00000515629	SLC4A2	P04920	1241 aa		6.82	□□□□□ -1.32
SLC38A9-223	ENST00000515629	PLEKHG5	O94827	1062 aa		6.81	□□□□□ -1.32
SLC38A9-223	ENST00000515629	ATXN8OS	P0DMR3	200 aa		6.81	□□□□□ -1.32
SLC38A9-223	ENST00000515629	HRC	P23327	699 aa		6.81	□□□□□ -1.32
SLC38A9-223	ENST00000515629	LOC105371045	A0A1W2PR82	267 aa		6.77	□□□□□ -1.33
SLC38A9-223	ENST00000515629	MYCN	P04198	464 aa	Predicted RBP	6.74	□□□□□ -1.33
SLC38A9-223	ENST00000515629	NCAPD3	P42695	1498 aa		6.74	□□□□□ -1.33
SLC38A9-223	ENST00000515629	NBR1	Q14596	966 aa		6.73	□□□□□ -1.33
SLC38A9-223	ENST00000515629	CUX2	O14529	1486 aa		6.73	□□□□□ -1.33
SLC38A9-223	ENST00000515629	ERCC6	Q03468	1493 aa		6.72	□□□□□ -1.33
SLC38A9-223	ENST00000515629	CFAP44	Q96MT7	982 aa		6.72	□□□□□ -1.33
SLC38A9-223	ENST00000515629	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	6.71	□□□□□ -1.34
SLC38A9-223	ENST00000515629	ATAD2B	Q9ULI0	1458 aa		6.71	□□□□□ -1.34
SLC38A9-223	ENST00000515629	NES	P48681	1621 aa		6.67	□□□□□ -1.34
SLC38A9-223	ENST00000515629	SMARCA2	P51531	1590 aa		6.66	□□□□□ -1.34
SLC38A9-223	ENST00000515629	HMGXB3	Q12766	1538 aa		6.66	□□□□□ -1.34
SLC38A9-223	ENST00000515629	SMARCA4	P51532	1647 aa		6.66	□□□□□ -1.34
SLC38A9-223	ENST00000515629	TSHZ2	Q9NRE2	1034 aa		6.65	□□□□□ -1.34
SLC38A9-223	ENST00000515629	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	6.65	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms