RNA–Protein interactions for RNA: ENST00000515463.1

SRP19-206, Transcript of signal recognition particle 19, humanhuman

TSL 3 BASIC

Gene SRP19, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-206ENST00000515463 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
SRP19-206ENST00000515463 CCDC180Q9P1Z9 1646 aa25.51■■□□□ 1.67
SRP19-206ENST00000515463 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
SRP19-206ENST00000515463 DCAF1Q9Y4B6 1507 aa24.31■■□□□ 1.48
SRP19-206ENST00000515463 DCAF8L2P0C7V8 631 aa24.01■■□□□ 1.43
SRP19-206ENST00000515463 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
SRP19-206ENST00000515463 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
SRP19-206ENST00000515463 NACADO15069 1562 aa23.67■■□□□ 1.38
SRP19-206ENST00000515463 ABCC9O60706 1549 aa23.67■■□□□ 1.38
SRP19-206ENST00000515463 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
SRP19-206ENST00000515463 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
SRP19-206ENST00000515463 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
SRP19-206ENST00000515463 UNC13AQ9UPW8 1703 aa22.9■■□□□ 1.26
SRP19-206ENST00000515463 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
SRP19-206ENST00000515463 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
SRP19-206ENST00000515463 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
SRP19-206ENST00000515463 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
SRP19-206ENST00000515463 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
SRP19-206ENST00000515463 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
SRP19-206ENST00000515463 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
SRP19-206ENST00000515463 WIZO95785 1651 aa22.44■■□□□ 1.18
SRP19-206ENST00000515463 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
SRP19-206ENST00000515463 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
SRP19-206ENST00000515463 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
SRP19-206ENST00000515463 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
SRP19-206ENST00000515463 CCDC88BA6NC98 1476 aa22.01■■□□□ 1.11
SRP19-206ENST00000515463 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
SRP19-206ENST00000515463 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.11
SRP19-206ENST00000515463 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
SRP19-206ENST00000515463 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
SRP19-206ENST00000515463 NCAPD3P42695 1498 aa21.81■■□□□ 1.08
SRP19-206ENST00000515463 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
SRP19-206ENST00000515463 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
SRP19-206ENST00000515463 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
SRP19-206ENST00000515463 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
SRP19-206ENST00000515463 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
SRP19-206ENST00000515463 EEA1Q15075 1411 aa21.44■■□□□ 1.02
SRP19-206ENST00000515463 FAM9AQ8IZU1 332 aaPredicted RBP21.42■■□□□ 1.02
SRP19-206ENST00000515463 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
SRP19-206ENST00000515463 CFTRP13569 1480 aa21.38■■□□□ 1.01
SRP19-206ENST00000515463 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
SRP19-206ENST00000515463 TOP2BQ02880 1626 aa21.3■■□□□ 1
SRP19-206ENST00000515463 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
SRP19-206ENST00000515463 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
SRP19-206ENST00000515463 SOGA1O94964 1423 aa21.23■□□□□ 0.99
SRP19-206ENST00000515463 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
SRP19-206ENST00000515463 RUSC2Q8N2Y8 1516 aa21.13■□□□□ 0.97
SRP19-206ENST00000515463 CUX1P39880 1505 aa21.12■□□□□ 0.97
SRP19-206ENST00000515463 KIF21BO75037 1637 aa21.09■□□□□ 0.97
SRP19-206ENST00000515463 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
SRP19-206ENST00000515463 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
SRP19-206ENST00000515463 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
SRP19-206ENST00000515463 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
SRP19-206ENST00000515463 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
SRP19-206ENST00000515463 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
SRP19-206ENST00000515463 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
SRP19-206ENST00000515463 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
SRP19-206ENST00000515463 UBTFP17480 764 aaKnown RBP20.94■□□□□ 0.94
SRP19-206ENST00000515463 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
SRP19-206ENST00000515463 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
SRP19-206ENST00000515463 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
SRP19-206ENST00000515463 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
SRP19-206ENST00000515463 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
SRP19-206ENST00000515463 NESP48681 1621 aa20.86■□□□□ 0.93
SRP19-206ENST00000515463 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
SRP19-206ENST00000515463 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
SRP19-206ENST00000515463 RAPGEF2Q9Y4G8 1499 aa20.81■□□□□ 0.92
SRP19-206ENST00000515463 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
SRP19-206ENST00000515463 CUX2O14529 1486 aa20.76■□□□□ 0.91
SRP19-206ENST00000515463 CLIP1P30622 1438 aa20.71■□□□□ 0.91
SRP19-206ENST00000515463 ABCA10Q8WWZ4 1543 aa20.71■□□□□ 0.91
SRP19-206ENST00000515463 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.9
SRP19-206ENST00000515463 IGF1RP08069 1367 aa20.69■□□□□ 0.9
SRP19-206ENST00000515463 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
SRP19-206ENST00000515463 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
SRP19-206ENST00000515463 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
SRP19-206ENST00000515463 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
SRP19-206ENST00000515463 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
SRP19-206ENST00000515463 HRCP23327 699 aa20.61■□□□□ 0.89
SRP19-206ENST00000515463 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
SRP19-206ENST00000515463 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
SRP19-206ENST00000515463 CUL7Q14999 1698 aa20.58■□□□□ 0.89
SRP19-206ENST00000515463 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
SRP19-206ENST00000515463 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
SRP19-206ENST00000515463 TARBP1Q13395 1621 aaKnown RBP20.48■□□□□ 0.87
SRP19-206ENST00000515463 APLP2Q06481 763 aa20.46■□□□□ 0.87
SRP19-206ENST00000515463 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
SRP19-206ENST00000515463 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
SRP19-206ENST00000515463 PPARGC1BQ86YN6 1023 aaKnown RBP20.44■□□□□ 0.86
SRP19-206ENST00000515463 WDR62O43379 1518 aa20.42■□□□□ 0.86
SRP19-206ENST00000515463 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
SRP19-206ENST00000515463 CTTNBP2Q8WZ74 1663 aa20.39■□□□□ 0.86
SRP19-206ENST00000515463 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
SRP19-206ENST00000515463 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
SRP19-206ENST00000515463 RANGAP1P46060 587 aaPredicted RBP20.37■□□□□ 0.85
SRP19-206ENST00000515463 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
SRP19-206ENST00000515463 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
SRP19-206ENST00000515463 EFCAB5A4FU69 1503 aa20.32■□□□□ 0.84
SRP19-206ENST00000515463 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
SRP19-206ENST00000515463 MAP3K1Q13233 1512 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms