RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-210ENST00000514621 AEBP2Q6ZN18 517 aaPredicted RBP28.74■■■□□ 2.19
HIPK1-210ENST00000514621 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
HIPK1-210ENST00000514621 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
HIPK1-210ENST00000514621 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
HIPK1-210ENST00000514621 FOXD1Q16676 465 aa22.72■■□□□ 1.23
HIPK1-210ENST00000514621 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
HIPK1-210ENST00000514621 PPP6R1Q9UPN7 881 aa21.56■■□□□ 1.04
HIPK1-210ENST00000514621 ADRA2BP18089 450 aa21.52■■□□□ 1.04
HIPK1-210ENST00000514621 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
HIPK1-210ENST00000514621 MSH5O43196 834 aa21.08■□□□□ 0.97
HIPK1-210ENST00000514621 POTEDQ86YR6 584 aa19.9■□□□□ 0.78
HIPK1-210ENST00000514621 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
HIPK1-210ENST00000514621 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
HIPK1-210ENST00000514621 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
HIPK1-210ENST00000514621 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
HIPK1-210ENST00000514621 CNKSR2Q8WXI2 1034 aa19.12■□□□□ 0.65
HIPK1-210ENST00000514621 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
HIPK1-210ENST00000514621 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
HIPK1-210ENST00000514621 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
HIPK1-210ENST00000514621 KCNA4P22459 653 aa18.72■□□□□ 0.59
HIPK1-210ENST00000514621 NPM3O75607 178 aaKnown RBP18.7■□□□□ 0.58
HIPK1-210ENST00000514621 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
HIPK1-210ENST00000514621 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
HIPK1-210ENST00000514621 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
HIPK1-210ENST00000514621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.97■□□□□ 0.47
HIPK1-210ENST00000514621 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
HIPK1-210ENST00000514621 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
HIPK1-210ENST00000514621 SLC4A2P04920 1241 aa17.77■□□□□ 0.44
HIPK1-210ENST00000514621 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
HIPK1-210ENST00000514621 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
HIPK1-210ENST00000514621 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
HIPK1-210ENST00000514621 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
HIPK1-210ENST00000514621 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
HIPK1-210ENST00000514621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
HIPK1-210ENST00000514621 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
HIPK1-210ENST00000514621 ZBTB22O15209 634 aa17.25■□□□□ 0.35
HIPK1-210ENST00000514621 CAPN15O75808 1086 aa17.21■□□□□ 0.35
HIPK1-210ENST00000514621 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
HIPK1-210ENST00000514621 APLP2Q06481 763 aa17.17■□□□□ 0.34
HIPK1-210ENST00000514621 DSG3P32926 999 aa17.04■□□□□ 0.32
HIPK1-210ENST00000514621 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
HIPK1-210ENST00000514621 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
HIPK1-210ENST00000514621 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
HIPK1-210ENST00000514621 ABCB7O75027 752 aa16.87■□□□□ 0.29
HIPK1-210ENST00000514621 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
HIPK1-210ENST00000514621 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
HIPK1-210ENST00000514621 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
HIPK1-210ENST00000514621 POLA2Q14181 598 aa16.68■□□□□ 0.26
HIPK1-210ENST00000514621 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
HIPK1-210ENST00000514621 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
HIPK1-210ENST00000514621 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
HIPK1-210ENST00000514621 FBLN2P98095 1184 aa16.14■□□□□ 0.17
HIPK1-210ENST00000514621 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
HIPK1-210ENST00000514621 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
HIPK1-210ENST00000514621 SPDYE2BA6NHP3 402 aa15.91■□□□□ 0.14
HIPK1-210ENST00000514621 SPDYE6P0CI01 402 aa15.91■□□□□ 0.14
HIPK1-210ENST00000514621 SPDYE2Q495Y8 402 aa15.91■□□□□ 0.14
HIPK1-210ENST00000514621 REM2Q8IYK8 340 aaPredicted RBP15.81■□□□□ 0.12
HIPK1-210ENST00000514621 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
HIPK1-210ENST00000514621 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
HIPK1-210ENST00000514621 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
HIPK1-210ENST00000514621 POTEHQ6S545 545 aa15.66■□□□□ 0.1
HIPK1-210ENST00000514621 PITPNM1O00562 1244 aa15.65■□□□□ 0.1
HIPK1-210ENST00000514621 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
HIPK1-210ENST00000514621 NISCHQ9Y2I1 1504 aa15.54■□□□□ 0.08
HIPK1-210ENST00000514621 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
HIPK1-210ENST00000514621 SPDYE1Q8NFV5 336 aaPredicted RBP15.52■□□□□ 0.08
HIPK1-210ENST00000514621 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
HIPK1-210ENST00000514621 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
HIPK1-210ENST00000514621 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
HIPK1-210ENST00000514621 PROM2Q8N271 834 aa15.27■□□□□ 0.04
HIPK1-210ENST00000514621 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
HIPK1-210ENST00000514621 PRKAR2AP13861 404 aaKnown RBP15.22■□□□□ 0.03
HIPK1-210ENST00000514621 FKBP8Q14318 412 aa15.22■□□□□ 0.03
HIPK1-210ENST00000514621 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
HIPK1-210ENST00000514621 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
HIPK1-210ENST00000514621 CREBZFQ9NS37 354 aa15.02■□□□□ -0
HIPK1-210ENST00000514621 HAX1O00165 279 aa15.01□□□□□ -0.01
HIPK1-210ENST00000514621 FARP1Q9Y4F1 1045 aaPredicted RBP14.97□□□□□ -0.01
HIPK1-210ENST00000514621 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
HIPK1-210ENST00000514621 EVX2Q03828 476 aa14.9□□□□□ -0.02
HIPK1-210ENST00000514621 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
HIPK1-210ENST00000514621 MNX1P50219 401 aaPredicted RBP14.83□□□□□ -0.04
HIPK1-210ENST00000514621 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
HIPK1-210ENST00000514621 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
HIPK1-210ENST00000514621 MIER1Q8N108 512 aa14.74□□□□□ -0.05
HIPK1-210ENST00000514621 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
HIPK1-210ENST00000514621 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
HIPK1-210ENST00000514621 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
HIPK1-210ENST00000514621 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
HIPK1-210ENST00000514621 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
HIPK1-210ENST00000514621 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
HIPK1-210ENST00000514621 GABBR2O75899 941 aa14.57□□□□□ -0.08
HIPK1-210ENST00000514621 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
HIPK1-210ENST00000514621 ZBTB47Q9UFB7 747 aaPredicted RBP14.55□□□□□ -0.08
HIPK1-210ENST00000514621 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
HIPK1-210ENST00000514621 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
HIPK1-210ENST00000514621 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
HIPK1-210ENST00000514621 NUBP1P53384 320 aa14.46□□□□□ -0.09
HIPK1-210ENST00000514621 CLCN6P51797 869 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms