RNA–Protein interactions for RNA: ENST00000512536.5

LINC00616-203, long intergenic non-protein coding RNA 616, humanhuman

TSL 4 BASIC

Gene LINC00616, Length 568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-203ENST00000512536 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
LINC00616-203ENST00000512536 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
LINC00616-203ENST00000512536 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
LINC00616-203ENST00000512536 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
LINC00616-203ENST00000512536 FOXD1Q16676 465 aa19.03■□□□□ 0.64
LINC00616-203ENST00000512536 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
LINC00616-203ENST00000512536 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
LINC00616-203ENST00000512536 ADRA2BP18089 450 aa17.94■□□□□ 0.46
LINC00616-203ENST00000512536 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
LINC00616-203ENST00000512536 MSH5O43196 834 aa17.57■□□□□ 0.4
LINC00616-203ENST00000512536 POTEDQ86YR6 584 aa16.83■□□□□ 0.28
LINC00616-203ENST00000512536 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
LINC00616-203ENST00000512536 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
LINC00616-203ENST00000512536 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
LINC00616-203ENST00000512536 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
LINC00616-203ENST00000512536 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
LINC00616-203ENST00000512536 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
LINC00616-203ENST00000512536 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
LINC00616-203ENST00000512536 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
LINC00616-203ENST00000512536 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
LINC00616-203ENST00000512536 KCNA4P22459 653 aa15.45■□□□□ 0.06
LINC00616-203ENST00000512536 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
LINC00616-203ENST00000512536 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
LINC00616-203ENST00000512536 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
LINC00616-203ENST00000512536 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
LINC00616-203ENST00000512536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
LINC00616-203ENST00000512536 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
LINC00616-203ENST00000512536 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
LINC00616-203ENST00000512536 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
LINC00616-203ENST00000512536 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
LINC00616-203ENST00000512536 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
LINC00616-203ENST00000512536 ZBTB22O15209 634 aa14.29□□□□□ -0.12
LINC00616-203ENST00000512536 CAPN15O75808 1086 aa14.27□□□□□ -0.13
LINC00616-203ENST00000512536 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
LINC00616-203ENST00000512536 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
LINC00616-203ENST00000512536 DSG3P32926 999 aa14.24□□□□□ -0.13
LINC00616-203ENST00000512536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
LINC00616-203ENST00000512536 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
LINC00616-203ENST00000512536 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
LINC00616-203ENST00000512536 TRHP20396 242 aaPredicted RBP14.12□□□□□ -0.15
LINC00616-203ENST00000512536 APLP2Q06481 763 aa14.11□□□□□ -0.15
LINC00616-203ENST00000512536 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
LINC00616-203ENST00000512536 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
LINC00616-203ENST00000512536 ABCB7O75027 752 aa14.02□□□□□ -0.17
LINC00616-203ENST00000512536 POLA2Q14181 598 aa13.84□□□□□ -0.19
LINC00616-203ENST00000512536 CSRNP3Q8WYN3 585 aa13.81□□□□□ -0.2
LINC00616-203ENST00000512536 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
LINC00616-203ENST00000512536 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
LINC00616-203ENST00000512536 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
LINC00616-203ENST00000512536 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
LINC00616-203ENST00000512536 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
LINC00616-203ENST00000512536 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
LINC00616-203ENST00000512536 FBLN2P98095 1184 aa13.26□□□□□ -0.29
LINC00616-203ENST00000512536 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
LINC00616-203ENST00000512536 POTEHQ6S545 545 aa13.18□□□□□ -0.3
LINC00616-203ENST00000512536 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
LINC00616-203ENST00000512536 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
LINC00616-203ENST00000512536 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
LINC00616-203ENST00000512536 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
LINC00616-203ENST00000512536 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
LINC00616-203ENST00000512536 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
LINC00616-203ENST00000512536 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
LINC00616-203ENST00000512536 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
LINC00616-203ENST00000512536 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
LINC00616-203ENST00000512536 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC00616-203ENST00000512536 PABPN1Q86U42 306 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC00616-203ENST00000512536 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
LINC00616-203ENST00000512536 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
LINC00616-203ENST00000512536 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
LINC00616-203ENST00000512536 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
LINC00616-203ENST00000512536 PROM2Q8N271 834 aa12.64□□□□□ -0.39
LINC00616-203ENST00000512536 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
LINC00616-203ENST00000512536 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
LINC00616-203ENST00000512536 EVX2Q03828 476 aa12.56□□□□□ -0.4
LINC00616-203ENST00000512536 HAX1O00165 279 aa12.51□□□□□ -0.41
LINC00616-203ENST00000512536 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
LINC00616-203ENST00000512536 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
LINC00616-203ENST00000512536 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
LINC00616-203ENST00000512536 C19orf67A6NJJ6 358 aa12.46□□□□□ -0.41
LINC00616-203ENST00000512536 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
LINC00616-203ENST00000512536 FKBP8Q14318 412 aa12.41□□□□□ -0.42
LINC00616-203ENST00000512536 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
LINC00616-203ENST00000512536 NISCHQ9Y2I1 1504 aa12.36□□□□□ -0.43
LINC00616-203ENST00000512536 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
LINC00616-203ENST00000512536 GABBR2O75899 941 aa12.19□□□□□ -0.46
LINC00616-203ENST00000512536 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
LINC00616-203ENST00000512536 MIER1Q8N108 512 aa12.11□□□□□ -0.47
LINC00616-203ENST00000512536 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
LINC00616-203ENST00000512536 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC00616-203ENST00000512536 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
LINC00616-203ENST00000512536 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
LINC00616-203ENST00000512536 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.49
LINC00616-203ENST00000512536 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
LINC00616-203ENST00000512536 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
LINC00616-203ENST00000512536 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
LINC00616-203ENST00000512536 CLCN6P51797 869 aa11.97□□□□□ -0.49
LINC00616-203ENST00000512536 NUBP1P53384 320 aa11.97□□□□□ -0.49
LINC00616-203ENST00000512536 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
LINC00616-203ENST00000512536 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
LINC00616-203ENST00000512536 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms