RNA–Protein interactions for RNA: ENST00000511071.5

ZFYVE28-208, Transcript of zinc finger FYVE-type containing 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZFYVE28, Length 3,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-208ENST00000511071 NISCHQ9Y2I1 1504 aa34.18■■■■□ 3.06
ZFYVE28-208ENST00000511071 SHROOM4Q9ULL8 1493 aa29.27■■■□□ 2.28
ZFYVE28-208ENST00000511071 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
ZFYVE28-208ENST00000511071 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
ZFYVE28-208ENST00000511071 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
ZFYVE28-208ENST00000511071 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
ZFYVE28-208ENST00000511071 CHIC1Q5VXU3 224 aa28.42■■■□□ 2.14
ZFYVE28-208ENST00000511071 HRCP23327 699 aa28.31■■■□□ 2.12
ZFYVE28-208ENST00000511071 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
ZFYVE28-208ENST00000511071 DCAF8L2P0C7V8 631 aa27.96■■■□□ 2.07
ZFYVE28-208ENST00000511071 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
ZFYVE28-208ENST00000511071 PPARGC1BQ86YN6 1023 aaKnown RBP27.55■■■□□ 2
ZFYVE28-208ENST00000511071 LOC105371045A0A1W2PR82 267 aa27.53■■■□□ 2
ZFYVE28-208ENST00000511071 ABCC9O60706 1549 aa27.48■■□□□ 1.99
ZFYVE28-208ENST00000511071 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
ZFYVE28-208ENST00000511071 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
ZFYVE28-208ENST00000511071 SCRIBQ14160 1630 aa27.07■■□□□ 1.92
ZFYVE28-208ENST00000511071 RB1CC1Q8TDY2 1594 aa27.01■■□□□ 1.91
ZFYVE28-208ENST00000511071 ZEB1P37275 1124 aaPredicted RBP26.98■■□□□ 1.91
ZFYVE28-208ENST00000511071 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
ZFYVE28-208ENST00000511071 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
ZFYVE28-208ENST00000511071 NACADO15069 1562 aa26.6■■□□□ 1.85
ZFYVE28-208ENST00000511071 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
ZFYVE28-208ENST00000511071 MROH2BQ7Z745 1585 aa26.57■■□□□ 1.84
ZFYVE28-208ENST00000511071 WIZO95785 1651 aa26.46■■□□□ 1.83
ZFYVE28-208ENST00000511071 EIF4G1Q04637 1599 aaKnown RBP26.39■■□□□ 1.81
ZFYVE28-208ENST00000511071 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
ZFYVE28-208ENST00000511071 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
ZFYVE28-208ENST00000511071 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
ZFYVE28-208ENST00000511071 SCAF1Q9H7N4 1312 aaKnown RBP26.33■■□□□ 1.81
ZFYVE28-208ENST00000511071 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
ZFYVE28-208ENST00000511071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.1■■□□□ 1.77
ZFYVE28-208ENST00000511071 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.76
ZFYVE28-208ENST00000511071 CCER1Q8TC90 406 aaPredicted RBP26.06■■□□□ 1.76
ZFYVE28-208ENST00000511071 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
ZFYVE28-208ENST00000511071 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
ZFYVE28-208ENST00000511071 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
ZFYVE28-208ENST00000511071 ACIN1Q9UKV3 1341 aaKnown RBP25.95■■□□□ 1.74
ZFYVE28-208ENST00000511071 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
ZFYVE28-208ENST00000511071 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
ZFYVE28-208ENST00000511071 TNIKQ9UKE5 1360 aa25.89■■□□□ 1.73
ZFYVE28-208ENST00000511071 NEUROD1Q13562 356 aa25.84■■□□□ 1.73
ZFYVE28-208ENST00000511071 DIEXFQ68CQ4 756 aaKnown RBP25.83■■□□□ 1.73
ZFYVE28-208ENST00000511071 EEA1Q15075 1411 aa25.83■■□□□ 1.73
ZFYVE28-208ENST00000511071 SOGA1O94964 1423 aa25.83■■□□□ 1.72
ZFYVE28-208ENST00000511071 UNC13AQ9UPW8 1703 aa25.73■■□□□ 1.71
ZFYVE28-208ENST00000511071 CENPBP07199 599 aaPredicted RBP25.7■■□□□ 1.71
ZFYVE28-208ENST00000511071 CSRNP3Q8WYN3 585 aa25.7■■□□□ 1.7
ZFYVE28-208ENST00000511071 RUSC2Q8N2Y8 1516 aa25.68■■□□□ 1.7
ZFYVE28-208ENST00000511071 GOLGA3Q08378 1498 aa25.65■■□□□ 1.7
ZFYVE28-208ENST00000511071 TTBK1Q5TCY1 1321 aaPredicted RBP25.64■■□□□ 1.69
ZFYVE28-208ENST00000511071 GTF3C3Q9Y5Q9 886 aa25.61■■□□□ 1.69
ZFYVE28-208ENST00000511071 UBTFP17480 764 aaKnown RBP25.57■■□□□ 1.68
ZFYVE28-208ENST00000511071 ZNF316A6NFI3 1004 aaPredicted RBP25.55■■□□□ 1.68
ZFYVE28-208ENST00000511071 KIF21BO75037 1637 aa25.49■■□□□ 1.67
ZFYVE28-208ENST00000511071 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
ZFYVE28-208ENST00000511071 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
ZFYVE28-208ENST00000511071 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
ZFYVE28-208ENST00000511071 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
ZFYVE28-208ENST00000511071 CLIP1P30622 1438 aa25.34■■□□□ 1.65
ZFYVE28-208ENST00000511071 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.64
ZFYVE28-208ENST00000511071 VPS8Q8N3P4 1428 aa25.32■■□□□ 1.64
ZFYVE28-208ENST00000511071 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
ZFYVE28-208ENST00000511071 MIER1Q8N108 512 aa25.22■■□□□ 1.63
ZFYVE28-208ENST00000511071 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
ZFYVE28-208ENST00000511071 MYT1Q01538 1121 aa25.17■■□□□ 1.62
ZFYVE28-208ENST00000511071 YTHDC1Q96MU7 727 aaKnown RBP25.15■■□□□ 1.62
ZFYVE28-208ENST00000511071 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
ZFYVE28-208ENST00000511071 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
ZFYVE28-208ENST00000511071 APLP2Q06481 763 aa25.1■■□□□ 1.61
ZFYVE28-208ENST00000511071 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
ZFYVE28-208ENST00000511071 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
ZFYVE28-208ENST00000511071 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
ZFYVE28-208ENST00000511071 ERICH3Q5RHP9 1530 aa25.01■■□□□ 1.59
ZFYVE28-208ENST00000511071 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.59
ZFYVE28-208ENST00000511071 PRXQ9BXM0 1461 aa24.95■■□□□ 1.58
ZFYVE28-208ENST00000511071 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
ZFYVE28-208ENST00000511071 RANGAP1P46060 587 aaPredicted RBP24.85■■□□□ 1.57
ZFYVE28-208ENST00000511071 RRBP1Q9P2E9 1410 aaKnown RBP24.84■■□□□ 1.57
ZFYVE28-208ENST00000511071 CUX2O14529 1486 aa24.81■■□□□ 1.56
ZFYVE28-208ENST00000511071 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
ZFYVE28-208ENST00000511071 CUX1P39880 1505 aa24.71■■□□□ 1.55
ZFYVE28-208ENST00000511071 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
ZFYVE28-208ENST00000511071 HMGXB3Q12766 1538 aa24.66■■□□□ 1.54
ZFYVE28-208ENST00000511071 CCNB3Q8WWL7 1395 aa24.65■■□□□ 1.54
ZFYVE28-208ENST00000511071 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
ZFYVE28-208ENST00000511071 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
ZFYVE28-208ENST00000511071 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
ZFYVE28-208ENST00000511071 CFTRP13569 1480 aa24.53■■□□□ 1.52
ZFYVE28-208ENST00000511071 MAP3K1Q13233 1512 aa24.52■■□□□ 1.52
ZFYVE28-208ENST00000511071 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
ZFYVE28-208ENST00000511071 RAB3GAP2Q9H2M9 1393 aa24.47■■□□□ 1.51
ZFYVE28-208ENST00000511071 TIAM1Q13009 1591 aa24.47■■□□□ 1.51
ZFYVE28-208ENST00000511071 PRDM2Q13029 1718 aa24.42■■□□□ 1.5
ZFYVE28-208ENST00000511071 IGF1RP08069 1367 aa24.38■■□□□ 1.49
ZFYVE28-208ENST00000511071 SETD5Q9C0A6 1442 aa24.37■■□□□ 1.49
ZFYVE28-208ENST00000511071 ITGAEP38570 1179 aa24.37■■□□□ 1.49
ZFYVE28-208ENST00000511071 LRRC9Q6ZRR7 1453 aa24.36■■□□□ 1.49
ZFYVE28-208ENST00000511071 TSHZ2Q9NRE2 1034 aa24.32■■□□□ 1.48
ZFYVE28-208ENST00000511071 KCNH8Q96L42 1107 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms