RNA–Protein interactions for RNA: ENST00000511033.1

SEC24D-210, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 4

Gene SEC24D, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-210ENST00000511033 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
SEC24D-210ENST00000511033 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
SEC24D-210ENST00000511033 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
SEC24D-210ENST00000511033 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
SEC24D-210ENST00000511033 FOXD1Q16676 465 aa16.86■□□□□ 0.29
SEC24D-210ENST00000511033 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
SEC24D-210ENST00000511033 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
SEC24D-210ENST00000511033 ADRA2BP18089 450 aa15.83■□□□□ 0.12
SEC24D-210ENST00000511033 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
SEC24D-210ENST00000511033 MSH5O43196 834 aa15.6■□□□□ 0.09
SEC24D-210ENST00000511033 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
SEC24D-210ENST00000511033 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
SEC24D-210ENST00000511033 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
SEC24D-210ENST00000511033 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
SEC24D-210ENST00000511033 PPP4R3CPQ6ZMV5 832 aa14.25□□□□□ -0.13
SEC24D-210ENST00000511033 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
SEC24D-210ENST00000511033 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
SEC24D-210ENST00000511033 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
SEC24D-210ENST00000511033 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
SEC24D-210ENST00000511033 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
SEC24D-210ENST00000511033 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
SEC24D-210ENST00000511033 KCNA4P22459 653 aa13.45□□□□□ -0.26
SEC24D-210ENST00000511033 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
SEC24D-210ENST00000511033 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
SEC24D-210ENST00000511033 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
SEC24D-210ENST00000511033 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
SEC24D-210ENST00000511033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.312e-9■■■■■ 30.5
SEC24D-210ENST00000511033 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SEC24D-210ENST00000511033 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
SEC24D-210ENST00000511033 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
SEC24D-210ENST00000511033 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
SEC24D-210ENST00000511033 CAPN15O75808 1086 aa12.62□□□□□ -0.39
SEC24D-210ENST00000511033 DSG3P32926 999 aa12.61□□□□□ -0.39
SEC24D-210ENST00000511033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
SEC24D-210ENST00000511033 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
SEC24D-210ENST00000511033 MYCNP04198 464 aaPredicted RBP12.47□□□□□ -0.41
SEC24D-210ENST00000511033 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
SEC24D-210ENST00000511033 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
SEC24D-210ENST00000511033 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
SEC24D-210ENST00000511033 APLP2Q06481 763 aa12.43□□□□□ -0.42
SEC24D-210ENST00000511033 ZBTB22O15209 634 aa12.42□□□□□ -0.42
SEC24D-210ENST00000511033 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
SEC24D-210ENST00000511033 ABCB7O75027 752 aa12.38□□□□□ -0.43
SEC24D-210ENST00000511033 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
SEC24D-210ENST00000511033 POLA2Q14181 598 aa12.2□□□□□ -0.46
SEC24D-210ENST00000511033 ATXN8OSP0DMR3 200 aa12.03□□□□□ -0.48
SEC24D-210ENST00000511033 CSRNP3Q8WYN3 585 aa11.95□□□□□ -0.5
SEC24D-210ENST00000511033 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
SEC24D-210ENST00000511033 ZBTB12Q9Y330 459 aaPredicted RBP11.85□□□□□ -0.51
SEC24D-210ENST00000511033 POTEHQ6S545 545 aa11.82□□□□□ -0.52
SEC24D-210ENST00000511033 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
SEC24D-210ENST00000511033 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
SEC24D-210ENST00000511033 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
SEC24D-210ENST00000511033 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
SEC24D-210ENST00000511033 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
SEC24D-210ENST00000511033 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
SEC24D-210ENST00000511033 FBLN2P98095 1184 aa11.64□□□□□ -0.55
SEC24D-210ENST00000511033 NISCHQ9Y2I1 1504 aa11.59□□□□□ -0.55
SEC24D-210ENST00000511033 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
SEC24D-210ENST00000511033 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
SEC24D-210ENST00000511033 SPDYE2Q495Y8 402 aa11.56□□□□□ -0.56
SEC24D-210ENST00000511033 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
SEC24D-210ENST00000511033 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
SEC24D-210ENST00000511033 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-210ENST00000511033 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
SEC24D-210ENST00000511033 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.586e-9■■■■■ 33.3
SEC24D-210ENST00000511033 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEC24D-210ENST00000511033 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
SEC24D-210ENST00000511033 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
SEC24D-210ENST00000511033 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
SEC24D-210ENST00000511033 EVX2Q03828 476 aa11.17□□□□□ -0.62
SEC24D-210ENST00000511033 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
SEC24D-210ENST00000511033 HAX1O00165 279 aa11.14□□□□□ -0.63
SEC24D-210ENST00000511033 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
SEC24D-210ENST00000511033 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
SEC24D-210ENST00000511033 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
SEC24D-210ENST00000511033 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
SEC24D-210ENST00000511033 PROM2Q8N271 834 aa10.99□□□□□ -0.65
SEC24D-210ENST00000511033 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
SEC24D-210ENST00000511033 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.65
SEC24D-210ENST00000511033 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
SEC24D-210ENST00000511033 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
SEC24D-210ENST00000511033 GABBR2O75899 941 aa10.83□□□□□ -0.68
SEC24D-210ENST00000511033 CD44P16070 742 aaKnown RBP10.83□□□□□ -0.68
SEC24D-210ENST00000511033 FKBP8Q14318 412 aa10.74□□□□□ -0.69
SEC24D-210ENST00000511033 ZRANB1Q9UGI0 708 aa10.7□□□□□ -0.7
SEC24D-210ENST00000511033 POTEIP0CG38 1075 aa10.69□□□□□ -0.7
SEC24D-210ENST00000511033 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
SEC24D-210ENST00000511033 NPM1P06748 294 aaKnown RBP eCLIP10.64□□□□□ -0.71
SEC24D-210ENST00000511033 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
SEC24D-210ENST00000511033 CLCN6P51797 869 aa10.6□□□□□ -0.71
SEC24D-210ENST00000511033 MIER1Q8N108 512 aa10.6□□□□□ -0.71
SEC24D-210ENST00000511033 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
SEC24D-210ENST00000511033 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
SEC24D-210ENST00000511033 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
SEC24D-210ENST00000511033 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
SEC24D-210ENST00000511033 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
SEC24D-210ENST00000511033 PLCD3Q8N3E9 789 aa10.49□□□□□ -0.73
SEC24D-210ENST00000511033 NUBP1P53384 320 aa10.47□□□□□ -0.73
SEC24D-210ENST00000511033 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms