RNA–Protein interactions for RNA: ENST00000510771.1

GYPA-207, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 3

Gene GYPA, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-207ENST00000510771 AEBP2Q6ZN18 517 aaPredicted RBP35.53■■■■□ 3.28
GYPA-207ENST00000510771 CHIC1Q5VXU3 224 aa34.13■■■■□ 3.05
GYPA-207ENST00000510771 SENP3Q9H4L4 574 aaPredicted RBP30.4■■■□□ 2.46
GYPA-207ENST00000510771 PHF23Q9BUL5 403 aaPredicted RBP29.98■■■□□ 2.39
GYPA-207ENST00000510771 FOXD1Q16676 465 aa28.19■■■□□ 2.1
GYPA-207ENST00000510771 PLPPR3Q6T4P5 718 aa27.46■■□□□ 1.99
GYPA-207ENST00000510771 PPP6R1Q9UPN7 881 aa26.55■■□□□ 1.84
GYPA-207ENST00000510771 ADRA2BP18089 450 aa26.51■■□□□ 1.83
GYPA-207ENST00000510771 PIAS4Q8N2W9 510 aaPredicted RBP26.47■■□□□ 1.83
GYPA-207ENST00000510771 MSH5O43196 834 aa26.38■■□□□ 1.81
GYPA-207ENST00000510771 POTEDQ86YR6 584 aa25.11■■□□□ 1.61
GYPA-207ENST00000510771 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
GYPA-207ENST00000510771 MAPK8IP2Q13387 824 aaPredicted RBP24.22■■□□□ 1.47
GYPA-207ENST00000510771 DMRT2Q9Y5R5 561 aa24.12■■□□□ 1.45
GYPA-207ENST00000510771 PPP4R3CPQ6ZMV5 832 aa24.06■■□□□ 1.44
GYPA-207ENST00000510771 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
GYPA-207ENST00000510771 HOXD11P31277 338 aaPredicted RBP23.36■■□□□ 1.33
GYPA-207ENST00000510771 NCBP3Q53F19 620 aaKnown RBP23.33■■□□□ 1.33
GYPA-207ENST00000510771 RNF216Q9NWF9 866 aaPredicted RBP23.29■■□□□ 1.32
GYPA-207ENST00000510771 DCAF8L1A6NGE4 600 aa23.1■■□□□ 1.29
GYPA-207ENST00000510771 NPM3O75607 178 aaKnown RBP22.88■■□□□ 1.25
GYPA-207ENST00000510771 KCNA4P22459 653 aa22.7■■□□□ 1.22
GYPA-207ENST00000510771 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
GYPA-207ENST00000510771 RNF39Q9H2S5 420 aa22.48■■□□□ 1.19
GYPA-207ENST00000510771 CACNB1Q02641 598 aaPredicted RBP22.4■■□□□ 1.18
GYPA-207ENST00000510771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.15
GYPA-207ENST00000510771 C1QBPQ07021 282 aaKnown RBP22.22■■□□□ 1.15
GYPA-207ENST00000510771 U3KPZ7 1027 aaPredicted RBP21.79■■□□□ 1.08
GYPA-207ENST00000510771 SLC4A2P04920 1241 aa21.74■■□□□ 1.07
GYPA-207ENST00000510771 SLC4A1APQ9BWU0 796 aaKnown RBP21.54■■□□□ 1.04
GYPA-207ENST00000510771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
GYPA-207ENST00000510771 HNRNPUL2Q1KMD3 747 aaKnown RBP21.42■■□□□ 1.02
GYPA-207ENST00000510771 APLP2Q06481 763 aa21.39■■□□□ 1.01
GYPA-207ENST00000510771 CAPN15O75808 1086 aa21.35■■□□□ 1.01
GYPA-207ENST00000510771 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
GYPA-207ENST00000510771 SAMD1Q6SPF0 538 aaPredicted RBP21.28■■□□□ 1
GYPA-207ENST00000510771 MYCNP04198 464 aaPredicted RBP21.23■□□□□ 0.99
GYPA-207ENST00000510771 FOXD4L1Q9NU39 408 aa21.16■□□□□ 0.98
GYPA-207ENST00000510771 DSG3P32926 999 aa21.14■□□□□ 0.97
GYPA-207ENST00000510771 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
GYPA-207ENST00000510771 TRHP20396 242 aaPredicted RBP21.08■□□□□ 0.97
GYPA-207ENST00000510771 ABCB7O75027 752 aa20.84■□□□□ 0.93
GYPA-207ENST00000510771 ZBTB22O15209 634 aa20.83■□□□□ 0.93
GYPA-207ENST00000510771 POLA2Q14181 598 aa20.58■□□□□ 0.89
GYPA-207ENST00000510771 ATF5Q9Y2D1 282 aaPredicted RBP20.57■□□□□ 0.88
GYPA-207ENST00000510771 ATXN8OSP0DMR3 200 aa20.52■□□□□ 0.88
GYPA-207ENST00000510771 ZBTB12Q9Y330 459 aaPredicted RBP20.32■□□□□ 0.84
GYPA-207ENST00000510771 RBM42Q9BTD8 480 aaKnown RBP20.28■□□□□ 0.84
GYPA-207ENST00000510771 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
GYPA-207ENST00000510771 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
GYPA-207ENST00000510771 FBLN2P98095 1184 aa19.92■□□□□ 0.78
GYPA-207ENST00000510771 OSCARQ8IYS5 282 aa19.91■□□□□ 0.78
GYPA-207ENST00000510771 AKT1S1Q96B36 256 aa19.83■□□□□ 0.77
GYPA-207ENST00000510771 POTEHQ6S545 545 aa19.77■□□□□ 0.76
GYPA-207ENST00000510771 MKRN4PQ13434 485 aaPredicted RBP19.67■□□□□ 0.74
GYPA-207ENST00000510771 SPDYE2BA6NHP3 402 aa19.66■□□□□ 0.74
GYPA-207ENST00000510771 SPDYE6P0CI01 402 aa19.66■□□□□ 0.74
GYPA-207ENST00000510771 SPDYE2Q495Y8 402 aa19.66■□□□□ 0.74
GYPA-207ENST00000510771 CHRDL2Q6WN34 429 aa19.63■□□□□ 0.73
GYPA-207ENST00000510771 REM2Q8IYK8 340 aaPredicted RBP19.59■□□□□ 0.73
GYPA-207ENST00000510771 ZNF692Q9BU19 519 aaPredicted RBP19.44■□□□□ 0.7
GYPA-207ENST00000510771 SSUH2Q9Y2M2 353 aa19.4■□□□□ 0.7
GYPA-207ENST00000510771 PITPNM1O00562 1244 aa19.37■□□□□ 0.69
GYPA-207ENST00000510771 SPDYE1Q8NFV5 336 aaPredicted RBP19.25■□□□□ 0.67
GYPA-207ENST00000510771 PIP4P2Q8N4L2 257 aa19.2■□□□□ 0.66
GYPA-207ENST00000510771 FXR2P51116 673 aaKnown RBP eCLIP19.15■□□□□ 0.66
GYPA-207ENST00000510771 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
GYPA-207ENST00000510771 CLEC11AQ9Y240 323 aa19.14■□□□□ 0.65
GYPA-207ENST00000510771 SPDYE4A6NLX3 237 aa18.98■□□□□ 0.63
GYPA-207ENST00000510771 PRR29P0C7W0 189 aa18.9■□□□□ 0.62
GYPA-207ENST00000510771 PRKAR2AP13861 404 aaKnown RBP18.88■□□□□ 0.61
GYPA-207ENST00000510771 HAX1O00165 279 aa18.79■□□□□ 0.6
GYPA-207ENST00000510771 STAG3Q9UJ98 1225 aa18.78■□□□□ 0.6
GYPA-207ENST00000510771 CHADLQ6NUI6 762 aa18.69■□□□□ 0.58
GYPA-207ENST00000510771 SP7Q8TDD2 431 aaPredicted RBP18.69■□□□□ 0.58
GYPA-207ENST00000510771 PROM2Q8N271 834 aa18.56■□□□□ 0.56
GYPA-207ENST00000510771 C19orf67A6NJJ6 358 aa18.53■□□□□ 0.56
GYPA-207ENST00000510771 FARP1Q9Y4F1 1045 aaPredicted RBP18.5■□□□□ 0.55
GYPA-207ENST00000510771 EVX2Q03828 476 aa18.47■□□□□ 0.55
GYPA-207ENST00000510771 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
GYPA-207ENST00000510771 FKBP8Q14318 412 aa18.33■□□□□ 0.52
GYPA-207ENST00000510771 CD44P16070 742 aaKnown RBP18.32■□□□□ 0.52
GYPA-207ENST00000510771 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
GYPA-207ENST00000510771 GABBR2O75899 941 aa18.16■□□□□ 0.5
GYPA-207ENST00000510771 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
GYPA-207ENST00000510771 PLEKHG5O94827 1062 aa18.14■□□□□ 0.49
GYPA-207ENST00000510771 CLCN6P51797 869 aa18.13■□□□□ 0.49
GYPA-207ENST00000510771 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
GYPA-207ENST00000510771 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
GYPA-207ENST00000510771 MIER1Q8N108 512 aa18.07■□□□□ 0.48
GYPA-207ENST00000510771 ZNF579Q8NAF0 562 aaKnown RBP18.07■□□□□ 0.48
GYPA-207ENST00000510771 PLCD3Q8N3E9 789 aa17.98■□□□□ 0.47
GYPA-207ENST00000510771 FBXO3Q9UK99 471 aa17.96■□□□□ 0.47
GYPA-207ENST00000510771 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
GYPA-207ENST00000510771 PHF12Q96QT6 1004 aa17.84■□□□□ 0.45
GYPA-207ENST00000510771 TSPYL2Q9H2G4 693 aaPredicted RBP17.81■□□□□ 0.44
GYPA-207ENST00000510771 DCBLD2Q96PD2 775 aa17.8■□□□□ 0.44
GYPA-207ENST00000510771 GALR2O43603 387 aaPredicted RBP17.77■□□□□ 0.44
GYPA-207ENST00000510771 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
GYPA-207ENST00000510771 POTEIP0CG38 1075 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms