RNA–Protein interactions for RNA: ENST00000510658.5

SNCAIP-215, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-215ENST00000510658 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
SNCAIP-215ENST00000510658 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
SNCAIP-215ENST00000510658 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
SNCAIP-215ENST00000510658 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
SNCAIP-215ENST00000510658 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
SNCAIP-215ENST00000510658 DCAF1Q9Y4B6 1507 aa25.2■■□□□ 1.62
SNCAIP-215ENST00000510658 ABCC9O60706 1549 aa24.96■■□□□ 1.59
SNCAIP-215ENST00000510658 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
SNCAIP-215ENST00000510658 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
SNCAIP-215ENST00000510658 NACADO15069 1562 aa24.58■■□□□ 1.52
SNCAIP-215ENST00000510658 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
SNCAIP-215ENST00000510658 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
SNCAIP-215ENST00000510658 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
SNCAIP-215ENST00000510658 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
SNCAIP-215ENST00000510658 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
SNCAIP-215ENST00000510658 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
SNCAIP-215ENST00000510658 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
SNCAIP-215ENST00000510658 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
SNCAIP-215ENST00000510658 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
SNCAIP-215ENST00000510658 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
SNCAIP-215ENST00000510658 WIZO95785 1651 aa23.57■■□□□ 1.36
SNCAIP-215ENST00000510658 SMARCA4P51532 1647 aa23.47■■□□□ 1.35
SNCAIP-215ENST00000510658 TOP2AP11388 1531 aaKnown RBP23.24■■□□□ 1.31
SNCAIP-215ENST00000510658 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
SNCAIP-215ENST00000510658 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
SNCAIP-215ENST00000510658 SMARCA2P51531 1590 aa23.08■■□□□ 1.28
SNCAIP-215ENST00000510658 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
SNCAIP-215ENST00000510658 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
SNCAIP-215ENST00000510658 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
SNCAIP-215ENST00000510658 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
SNCAIP-215ENST00000510658 LOC105371045A0A1W2PR82 267 aa22.91■■□□□ 1.26
SNCAIP-215ENST00000510658 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
SNCAIP-215ENST00000510658 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
SNCAIP-215ENST00000510658 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
SNCAIP-215ENST00000510658 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
SNCAIP-215ENST00000510658 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
SNCAIP-215ENST00000510658 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
SNCAIP-215ENST00000510658 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
SNCAIP-215ENST00000510658 SOGA1O94964 1423 aa22.43■■□□□ 1.18
SNCAIP-215ENST00000510658 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
SNCAIP-215ENST00000510658 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
SNCAIP-215ENST00000510658 CFTRP13569 1480 aa22.35■■□□□ 1.17
SNCAIP-215ENST00000510658 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
SNCAIP-215ENST00000510658 EEA1Q15075 1411 aa22.24■■□□□ 1.15
SNCAIP-215ENST00000510658 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
SNCAIP-215ENST00000510658 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
SNCAIP-215ENST00000510658 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
SNCAIP-215ENST00000510658 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
SNCAIP-215ENST00000510658 CUX1P39880 1505 aa22.16■■□□□ 1.14
SNCAIP-215ENST00000510658 PRDM2Q13029 1718 aa22.13■■□□□ 1.13
SNCAIP-215ENST00000510658 DNAJC5BQ9UF47 199 aa22.09■■□□□ 1.13
SNCAIP-215ENST00000510658 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
SNCAIP-215ENST00000510658 GOLGA3Q08378 1498 aa22.04■■□□□ 1.12
SNCAIP-215ENST00000510658 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
SNCAIP-215ENST00000510658 NESP48681 1621 aa22.03■■□□□ 1.12
SNCAIP-215ENST00000510658 CEP162Q5TB80 1403 aa22■■□□□ 1.11
SNCAIP-215ENST00000510658 FANCD2Q9BXW9 1451 aa22■■□□□ 1.11
SNCAIP-215ENST00000510658 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
SNCAIP-215ENST00000510658 KIF21BO75037 1637 aa21.97■■□□□ 1.11
SNCAIP-215ENST00000510658 TRIM26Q12899 539 aaPredicted RBP21.96■■□□□ 1.11
SNCAIP-215ENST00000510658 RAPGEF2Q9Y4G8 1499 aa21.93■■□□□ 1.1
SNCAIP-215ENST00000510658 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
SNCAIP-215ENST00000510658 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
SNCAIP-215ENST00000510658 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
SNCAIP-215ENST00000510658 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
SNCAIP-215ENST00000510658 PRXQ9BXM0 1461 aa21.83■■□□□ 1.08
SNCAIP-215ENST00000510658 CUX2O14529 1486 aa21.82■■□□□ 1.08
SNCAIP-215ENST00000510658 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
SNCAIP-215ENST00000510658 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
SNCAIP-215ENST00000510658 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
SNCAIP-215ENST00000510658 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
SNCAIP-215ENST00000510658 CLIP1P30622 1438 aa21.74■■□□□ 1.07
SNCAIP-215ENST00000510658 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
SNCAIP-215ENST00000510658 RAD54L2Q9Y4B4 1467 aa21.73■■□□□ 1.07
SNCAIP-215ENST00000510658 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
SNCAIP-215ENST00000510658 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
SNCAIP-215ENST00000510658 IGF1RP08069 1367 aa21.71■■□□□ 1.07
SNCAIP-215ENST00000510658 HRCP23327 699 aa21.7■■□□□ 1.07
SNCAIP-215ENST00000510658 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
SNCAIP-215ENST00000510658 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
SNCAIP-215ENST00000510658 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
SNCAIP-215ENST00000510658 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
SNCAIP-215ENST00000510658 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
SNCAIP-215ENST00000510658 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
SNCAIP-215ENST00000510658 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
SNCAIP-215ENST00000510658 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
SNCAIP-215ENST00000510658 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
SNCAIP-215ENST00000510658 ARHGAP35Q9NRY4 1499 aa21.43■■□□□ 1.02
SNCAIP-215ENST00000510658 ABCA5Q8WWZ7 1642 aa21.41■■□□□ 1.02
SNCAIP-215ENST00000510658 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
SNCAIP-215ENST00000510658 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
SNCAIP-215ENST00000510658 APLP2Q06481 763 aa21.4■■□□□ 1.02
SNCAIP-215ENST00000510658 CUL7Q14999 1698 aa21.38■■□□□ 1.01
SNCAIP-215ENST00000510658 ERCC6Q03468 1493 aa21.31■■□□□ 1
SNCAIP-215ENST00000510658 WDR62O43379 1518 aa21.31■■□□□ 1
SNCAIP-215ENST00000510658 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 1
SNCAIP-215ENST00000510658 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
SNCAIP-215ENST00000510658 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
SNCAIP-215ENST00000510658 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
SNCAIP-215ENST00000510658 IFT140Q96RY7 1462 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms