RNA–Protein interactions for RNA: ENST00000508358.1

AC004063.1-201, humanhuman

TSL 4 BASIC

Gene AC004063.1, Length 547 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004063.1-201ENST00000508358 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
AC004063.1-201ENST00000508358 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
AC004063.1-201ENST00000508358 SENP3Q9H4L4 574 aaPredicted RBP22.6■■□□□ 1.21
AC004063.1-201ENST00000508358 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
AC004063.1-201ENST00000508358 FOXD1Q16676 465 aa20.99■□□□□ 0.95
AC004063.1-201ENST00000508358 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
AC004063.1-201ENST00000508358 MSH5O43196 834 aa19.8■□□□□ 0.76
AC004063.1-201ENST00000508358 PIAS4Q8N2W9 510 aaPredicted RBP19.63■□□□□ 0.73
AC004063.1-201ENST00000508358 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
AC004063.1-201ENST00000508358 ADRA2BP18089 450 aa19.45■□□□□ 0.7
AC004063.1-201ENST00000508358 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
AC004063.1-201ENST00000508358 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
AC004063.1-201ENST00000508358 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
AC004063.1-201ENST00000508358 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
AC004063.1-201ENST00000508358 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
AC004063.1-201ENST00000508358 KCNA4P22459 653 aa17.38■□□□□ 0.37
AC004063.1-201ENST00000508358 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
AC004063.1-201ENST00000508358 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
AC004063.1-201ENST00000508358 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
AC004063.1-201ENST00000508358 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
AC004063.1-201ENST00000508358 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
AC004063.1-201ENST00000508358 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
AC004063.1-201ENST00000508358 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
AC004063.1-201ENST00000508358 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
AC004063.1-201ENST00000508358 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
AC004063.1-201ENST00000508358 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
AC004063.1-201ENST00000508358 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
AC004063.1-201ENST00000508358 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
AC004063.1-201ENST00000508358 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
AC004063.1-201ENST00000508358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.4■□□□□ 0.22
AC004063.1-201ENST00000508358 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
AC004063.1-201ENST00000508358 ZBTB22O15209 634 aa15.98■□□□□ 0.15
AC004063.1-201ENST00000508358 U3KPZ7 1027 aaPredicted RBP15.95■□□□□ 0.14
AC004063.1-201ENST00000508358 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
AC004063.1-201ENST00000508358 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
AC004063.1-201ENST00000508358 CAPN15O75808 1086 aa15.81■□□□□ 0.12
AC004063.1-201ENST00000508358 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
AC004063.1-201ENST00000508358 DSG3P32926 999 aa15.7■□□□□ 0.1
AC004063.1-201ENST00000508358 APLP2Q06481 763 aa15.69■□□□□ 0.1
AC004063.1-201ENST00000508358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
AC004063.1-201ENST00000508358 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
AC004063.1-201ENST00000508358 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
AC004063.1-201ENST00000508358 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
AC004063.1-201ENST00000508358 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
AC004063.1-201ENST00000508358 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
AC004063.1-201ENST00000508358 ABCC9O60706 1549 aa15.48■□□□□ 0.07
AC004063.1-201ENST00000508358 ABCB7O75027 752 aa15.36■□□□□ 0.05
AC004063.1-201ENST00000508358 ATXN8OSP0DMR3 200 aa15.35■□□□□ 0.05
AC004063.1-201ENST00000508358 POTEHQ6S545 545 aa15.23■□□□□ 0.03
AC004063.1-201ENST00000508358 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
AC004063.1-201ENST00000508358 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
AC004063.1-201ENST00000508358 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
AC004063.1-201ENST00000508358 POLA2Q14181 598 aa15.07■□□□□ 0
AC004063.1-201ENST00000508358 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
AC004063.1-201ENST00000508358 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
AC004063.1-201ENST00000508358 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
AC004063.1-201ENST00000508358 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
AC004063.1-201ENST00000508358 FBLN2P98095 1184 aa14.55□□□□□ -0.08
AC004063.1-201ENST00000508358 FKBP8Q14318 412 aa14.55□□□□□ -0.08
AC004063.1-201ENST00000508358 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
AC004063.1-201ENST00000508358 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
AC004063.1-201ENST00000508358 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
AC004063.1-201ENST00000508358 DCAF8L2P0C7V8 631 aa14.47□□□□□ -0.09
AC004063.1-201ENST00000508358 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
AC004063.1-201ENST00000508358 NACADO15069 1562 aa14.37□□□□□ -0.11
AC004063.1-201ENST00000508358 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
AC004063.1-201ENST00000508358 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
AC004063.1-201ENST00000508358 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
AC004063.1-201ENST00000508358 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
AC004063.1-201ENST00000508358 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
AC004063.1-201ENST00000508358 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
AC004063.1-201ENST00000508358 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
AC004063.1-201ENST00000508358 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
AC004063.1-201ENST00000508358 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
AC004063.1-201ENST00000508358 HAX1O00165 279 aa14.16□□□□□ -0.14
AC004063.1-201ENST00000508358 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
AC004063.1-201ENST00000508358 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
AC004063.1-201ENST00000508358 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
AC004063.1-201ENST00000508358 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
AC004063.1-201ENST00000508358 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
AC004063.1-201ENST00000508358 PROM2Q8N271 834 aa14.06□□□□□ -0.16
AC004063.1-201ENST00000508358 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
AC004063.1-201ENST00000508358 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
AC004063.1-201ENST00000508358 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
AC004063.1-201ENST00000508358 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
AC004063.1-201ENST00000508358 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
AC004063.1-201ENST00000508358 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
AC004063.1-201ENST00000508358 EVX2Q03828 476 aa13.85□□□□□ -0.19
AC004063.1-201ENST00000508358 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
AC004063.1-201ENST00000508358 EIF4G1Q04637 1599 aaKnown RBP13.8□□□□□ -0.2
AC004063.1-201ENST00000508358 SCRIBQ14160 1630 aa13.8□□□□□ -0.2
AC004063.1-201ENST00000508358 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
AC004063.1-201ENST00000508358 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
AC004063.1-201ENST00000508358 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
AC004063.1-201ENST00000508358 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
AC004063.1-201ENST00000508358 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
AC004063.1-201ENST00000508358 STAG3Q9UJ98 1225 aa13.74□□□□□ -0.21
AC004063.1-201ENST00000508358 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
AC004063.1-201ENST00000508358 GABBR2O75899 941 aa13.61□□□□□ -0.23
AC004063.1-201ENST00000508358 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms