RNA–Protein interactions for RNA: ENST00000506955.5

FAM193B-208, Transcript of family with sequence similarity 193 member B, humanhuman

TSL 1 (best)

Gene FAM193B, Length 4,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM193B-208ENST00000506955 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
FAM193B-208ENST00000506955 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
FAM193B-208ENST00000506955 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.93
FAM193B-208ENST00000506955 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
FAM193B-208ENST00000506955 EHMT2Q96KQ7 1210 aa25.97■■□□□ 1.75
FAM193B-208ENST00000506955 FAM9AQ8IZU1 332 aaPredicted RBP25.52■■□□□ 1.68
FAM193B-208ENST00000506955 APLP2Q06481 763 aa25.4■■□□□ 1.66
FAM193B-208ENST00000506955 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
FAM193B-208ENST00000506955 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
FAM193B-208ENST00000506955 TTBK1Q5TCY1 1321 aaPredicted RBP24.99■■□□□ 1.59
FAM193B-208ENST00000506955 UBTFP17480 764 aaKnown RBP24.82■■□□□ 1.56
FAM193B-208ENST00000506955 PCGF6Q9BYE7 350 aa24.76■■□□□ 1.55
FAM193B-208ENST00000506955 ATP1B4Q9UN42 357 aaPredicted RBP24.74■■□□□ 1.55
FAM193B-208ENST00000506955 ABCC9O60706 1549 aa24.74■■□□□ 1.55
FAM193B-208ENST00000506955 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.513e-6■□□□□ 9.8
FAM193B-208ENST00000506955 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
FAM193B-208ENST00000506955 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
FAM193B-208ENST00000506955 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
FAM193B-208ENST00000506955 ZEB1P37275 1124 aaPredicted RBP24.17■■□□□ 1.46
FAM193B-208ENST00000506955 LOC105371045A0A1W2PR82 267 aa24.11■■□□□ 1.45
FAM193B-208ENST00000506955 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
FAM193B-208ENST00000506955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.03■■□□□ 1.44
FAM193B-208ENST00000506955 HNRNPUL2Q1KMD3 747 aaKnown RBP24.03■■□□□ 1.44
FAM193B-208ENST00000506955 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
FAM193B-208ENST00000506955 ITGAEP38570 1179 aa23.87■■□□□ 1.41
FAM193B-208ENST00000506955 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
FAM193B-208ENST00000506955 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
FAM193B-208ENST00000506955 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
FAM193B-208ENST00000506955 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
FAM193B-208ENST00000506955 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
FAM193B-208ENST00000506955 FBLN2P98095 1184 aa23.47■■□□□ 1.35
FAM193B-208ENST00000506955 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
FAM193B-208ENST00000506955 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
FAM193B-208ENST00000506955 POLR3GLQ9BT43 218 aa23.32■■□□□ 1.32
FAM193B-208ENST00000506955 HRCP23327 699 aa23.32■■□□□ 1.32
FAM193B-208ENST00000506955 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
FAM193B-208ENST00000506955 NEFLP07196 543 aa23.24■■□□□ 1.31
FAM193B-208ENST00000506955 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
FAM193B-208ENST00000506955 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
FAM193B-208ENST00000506955 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
FAM193B-208ENST00000506955 CNGB1Q14028 1251 aaPredicted RBP23.08■■□□□ 1.29
FAM193B-208ENST00000506955 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
FAM193B-208ENST00000506955 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
FAM193B-208ENST00000506955 ERICH6Q7L0X2 663 aa22.96■■□□□ 1.27
FAM193B-208ENST00000506955 NACADO15069 1562 aa22.93■■□□□ 1.26
FAM193B-208ENST00000506955 SLC4A1APQ9BWU0 796 aaKnown RBP22.93■■□□□ 1.26
FAM193B-208ENST00000506955 CDK11AQ9UQ88 783 aaPredicted RBP22.88■■□□□ 1.25
FAM193B-208ENST00000506955 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
FAM193B-208ENST00000506955 ZNF777Q9ULD5 760 aaPredicted RBP22.82■■□□□ 1.24
FAM193B-208ENST00000506955 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
FAM193B-208ENST00000506955 DIEXFQ68CQ4 756 aaKnown RBP22.77■■□□□ 1.24
FAM193B-208ENST00000506955 NPM1P06748 294 aaKnown RBP eCLIP22.66■■□□□ 1.22
FAM193B-208ENST00000506955 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.22
FAM193B-208ENST00000506955 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
FAM193B-208ENST00000506955 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
FAM193B-208ENST00000506955 BCANQ96GW7 911 aa22.51■■□□□ 1.19
FAM193B-208ENST00000506955 ESF1Q9H501 851 aaKnown RBP22.48■■□□□ 1.19
FAM193B-208ENST00000506955 CECR2Q9BXF3 1484 aa22.48■■□□□ 1.19
FAM193B-208ENST00000506955 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.192e-7■□□□□ 9.9
FAM193B-208ENST00000506955 ANP32CO43423 234 aa22.46■■□□□ 1.19
FAM193B-208ENST00000506955 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
FAM193B-208ENST00000506955 ZNF316A6NFI3 1004 aaPredicted RBP22.43■■□□□ 1.18
FAM193B-208ENST00000506955 CLIP1P30622 1438 aa22.42■■□□□ 1.18
FAM193B-208ENST00000506955 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
FAM193B-208ENST00000506955 MTUS2Q5JR59 1369 aa22.4■■□□□ 1.18
FAM193B-208ENST00000506955 EEA1Q15075 1411 aa22.4■■□□□ 1.18
FAM193B-208ENST00000506955 DAXXQ9UER7 740 aaPredicted RBP22.35■■□□□ 1.17
FAM193B-208ENST00000506955 TSPY4P0CV99 314 aa22.35■■□□□ 1.17
FAM193B-208ENST00000506955 TSPY10P0CW01 314 aa22.35■■□□□ 1.17
FAM193B-208ENST00000506955 CHGAP10645 457 aaKnown RBP22.33■■□□□ 1.16
FAM193B-208ENST00000506955 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
FAM193B-208ENST00000506955 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
FAM193B-208ENST00000506955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.27■■□□□ 1.163e-6■□□□□ 10.7
FAM193B-208ENST00000506955 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
FAM193B-208ENST00000506955 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
FAM193B-208ENST00000506955 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
FAM193B-208ENST00000506955 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
FAM193B-208ENST00000506955 PLEKHD1A6NEE1 506 aa22.22■■□□□ 1.15
FAM193B-208ENST00000506955 KCNH8Q96L42 1107 aa22.22■■□□□ 1.15
FAM193B-208ENST00000506955 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
FAM193B-208ENST00000506955 CEP162Q5TB80 1403 aa22.2■■□□□ 1.14
FAM193B-208ENST00000506955 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
FAM193B-208ENST00000506955 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
FAM193B-208ENST00000506955 NEFMP07197 916 aa22.12■■□□□ 1.13
FAM193B-208ENST00000506955 CEP164Q9UPV0 1460 aa22.12■■□□□ 1.13
FAM193B-208ENST00000506955 TNIKQ9UKE5 1360 aa22.11■■□□□ 1.13
FAM193B-208ENST00000506955 MYT1Q01538 1121 aa22.1■■□□□ 1.13
FAM193B-208ENST00000506955 RRP7BPQ9NSQ0 103 aa22.1■■□□□ 1.13
FAM193B-208ENST00000506955 SLC24A1O60721 1099 aa22.08■■□□□ 1.12
FAM193B-208ENST00000506955 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
FAM193B-208ENST00000506955 CFDP1Q9UEE9 299 aaPredicted RBP22.02■■□□□ 1.12
FAM193B-208ENST00000506955 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
FAM193B-208ENST00000506955 CUX2O14529 1486 aa22.01■■□□□ 1.11
FAM193B-208ENST00000506955 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
FAM193B-208ENST00000506955 DDX10Q13206 875 aaKnown RBP22■■□□□ 1.11
FAM193B-208ENST00000506955 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
FAM193B-208ENST00000506955 SOGA1O94964 1423 aa21.96■■□□□ 1.11
FAM193B-208ENST00000506955 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
FAM193B-208ENST00000506955 GTF3C3Q9Y5Q9 886 aa21.95■■□□□ 1.1
FAM193B-208ENST00000506955 ZBTB47Q9UFB7 747 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms