RNA–Protein interactions for RNA: ENST00000505631.1

ARRDC3-203, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-203ENST00000505631 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
ARRDC3-203ENST00000505631 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
ARRDC3-203ENST00000505631 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
ARRDC3-203ENST00000505631 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
ARRDC3-203ENST00000505631 FOXD1Q16676 465 aa17.71■□□□□ 0.43
ARRDC3-203ENST00000505631 PLPPR3Q6T4P5 718 aa17.19■□□□□ 0.34
ARRDC3-203ENST00000505631 PPP6R1Q9UPN7 881 aa16.73■□□□□ 0.27
ARRDC3-203ENST00000505631 ADRA2BP18089 450 aa16.67■□□□□ 0.26
ARRDC3-203ENST00000505631 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
ARRDC3-203ENST00000505631 MSH5O43196 834 aa16.46■□□□□ 0.23
ARRDC3-203ENST00000505631 POTEDQ86YR6 584 aa15.74■□□□□ 0.11
ARRDC3-203ENST00000505631 MAPK8IP2Q13387 824 aaPredicted RBP15.25■□□□□ 0.03
ARRDC3-203ENST00000505631 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
ARRDC3-203ENST00000505631 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
ARRDC3-203ENST00000505631 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
ARRDC3-203ENST00000505631 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
ARRDC3-203ENST00000505631 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
ARRDC3-203ENST00000505631 RNF216Q9NWF9 866 aaPredicted RBP14.59□□□□□ -0.07
ARRDC3-203ENST00000505631 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
ARRDC3-203ENST00000505631 DCAF8L1A6NGE4 600 aa14.41□□□□□ -0.1
ARRDC3-203ENST00000505631 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
ARRDC3-203ENST00000505631 KCNA4P22459 653 aa14.28□□□□□ -0.12
ARRDC3-203ENST00000505631 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
ARRDC3-203ENST00000505631 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
ARRDC3-203ENST00000505631 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
ARRDC3-203ENST00000505631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.18
ARRDC3-203ENST00000505631 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
ARRDC3-203ENST00000505631 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
ARRDC3-203ENST00000505631 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
ARRDC3-203ENST00000505631 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
ARRDC3-203ENST00000505631 SPINK5Q9NQ38 1064 aaPredicted RBP13.42□□□□□ -0.26
ARRDC3-203ENST00000505631 CAPN15O75808 1086 aa13.34□□□□□ -0.27
ARRDC3-203ENST00000505631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
ARRDC3-203ENST00000505631 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
ARRDC3-203ENST00000505631 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
ARRDC3-203ENST00000505631 APLP2Q06481 763 aa13.28□□□□□ -0.28
ARRDC3-203ENST00000505631 DSG3P32926 999 aa13.27□□□□□ -0.29
ARRDC3-203ENST00000505631 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.29
ARRDC3-203ENST00000505631 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
ARRDC3-203ENST00000505631 TRHP20396 242 aaPredicted RBP13.18□□□□□ -0.3
ARRDC3-203ENST00000505631 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
ARRDC3-203ENST00000505631 ZBTB22O15209 634 aa13.16□□□□□ -0.3
ARRDC3-203ENST00000505631 ABCB7O75027 752 aa13.05□□□□□ -0.32
ARRDC3-203ENST00000505631 ATF5Q9Y2D1 282 aaPredicted RBP12.98□□□□□ -0.33
ARRDC3-203ENST00000505631 POLA2Q14181 598 aa12.9□□□□□ -0.34
ARRDC3-203ENST00000505631 ATXN8OSP0DMR3 200 aa12.85□□□□□ -0.35
ARRDC3-203ENST00000505631 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
ARRDC3-203ENST00000505631 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
ARRDC3-203ENST00000505631 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
ARRDC3-203ENST00000505631 RBM42Q9BTD8 480 aaKnown RBP12.62□□□□□ -0.39
ARRDC3-203ENST00000505631 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
ARRDC3-203ENST00000505631 MKRN4PQ13434 485 aaPredicted RBP12.41□□□□□ -0.42
ARRDC3-203ENST00000505631 FBLN2P98095 1184 aa12.4□□□□□ -0.42
ARRDC3-203ENST00000505631 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
ARRDC3-203ENST00000505631 POTEHQ6S545 545 aa12.36□□□□□ -0.43
ARRDC3-203ENST00000505631 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
ARRDC3-203ENST00000505631 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
ARRDC3-203ENST00000505631 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
ARRDC3-203ENST00000505631 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
ARRDC3-203ENST00000505631 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
ARRDC3-203ENST00000505631 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
ARRDC3-203ENST00000505631 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
ARRDC3-203ENST00000505631 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
ARRDC3-203ENST00000505631 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
ARRDC3-203ENST00000505631 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.49
ARRDC3-203ENST00000505631 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
ARRDC3-203ENST00000505631 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
ARRDC3-203ENST00000505631 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
ARRDC3-203ENST00000505631 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
ARRDC3-203ENST00000505631 PRKAR2AP13861 404 aaKnown RBP11.82□□□□□ -0.52
ARRDC3-203ENST00000505631 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
ARRDC3-203ENST00000505631 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
ARRDC3-203ENST00000505631 HAX1O00165 279 aa11.72□□□□□ -0.53
ARRDC3-203ENST00000505631 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
ARRDC3-203ENST00000505631 PROM2Q8N271 834 aa11.69□□□□□ -0.54
ARRDC3-203ENST00000505631 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
ARRDC3-203ENST00000505631 EVX2Q03828 476 aa11.65□□□□□ -0.54
ARRDC3-203ENST00000505631 C19orf67A6NJJ6 358 aa11.62□□□□□ -0.55
ARRDC3-203ENST00000505631 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
ARRDC3-203ENST00000505631 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
ARRDC3-203ENST00000505631 FKBP8Q14318 412 aa11.49□□□□□ -0.57
ARRDC3-203ENST00000505631 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
ARRDC3-203ENST00000505631 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
ARRDC3-203ENST00000505631 GABBR2O75899 941 aa11.38□□□□□ -0.59
ARRDC3-203ENST00000505631 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
ARRDC3-203ENST00000505631 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
ARRDC3-203ENST00000505631 ZRANB1Q9UGI0 708 aa11.31□□□□□ -0.6
ARRDC3-203ENST00000505631 MIER1Q8N108 512 aa11.29□□□□□ -0.6
ARRDC3-203ENST00000505631 CLCN6P51797 869 aa11.28□□□□□ -0.6
ARRDC3-203ENST00000505631 PAK3O75914 559 aaPredicted RBP11.24□□□□□ -0.61
ARRDC3-203ENST00000505631 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
ARRDC3-203ENST00000505631 PLCD3Q8N3E9 789 aa11.21□□□□□ -0.61
ARRDC3-203ENST00000505631 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
ARRDC3-203ENST00000505631 FBXO3Q9UK99 471 aa11.19□□□□□ -0.62
ARRDC3-203ENST00000505631 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
ARRDC3-203ENST00000505631 GALR2O43603 387 aaPredicted RBP11.15□□□□□ -0.62
ARRDC3-203ENST00000505631 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
ARRDC3-203ENST00000505631 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
ARRDC3-203ENST00000505631 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
ARRDC3-203ENST00000505631 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms