RNA–Protein interactions for RNA: ENST00000505459.5

SRP19-204, Transcript of signal recognition particle 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP19, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-204ENST00000505459 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
SRP19-204ENST00000505459 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
SRP19-204ENST00000505459 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
SRP19-204ENST00000505459 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
SRP19-204ENST00000505459 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
SRP19-204ENST00000505459 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
SRP19-204ENST00000505459 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
SRP19-204ENST00000505459 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
SRP19-204ENST00000505459 ABCC9O60706 1549 aa16.52■□□□□ 0.24
SRP19-204ENST00000505459 NACADO15069 1562 aa16.36■□□□□ 0.21
SRP19-204ENST00000505459 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
SRP19-204ENST00000505459 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
SRP19-204ENST00000505459 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
SRP19-204ENST00000505459 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
SRP19-204ENST00000505459 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
SRP19-204ENST00000505459 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
SRP19-204ENST00000505459 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
SRP19-204ENST00000505459 WIZO95785 1651 aa15.82■□□□□ 0.12
SRP19-204ENST00000505459 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
SRP19-204ENST00000505459 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
SRP19-204ENST00000505459 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
SRP19-204ENST00000505459 SMARCA4P51532 1647 aa15.71■□□□□ 0.1
SRP19-204ENST00000505459 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
SRP19-204ENST00000505459 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
SRP19-204ENST00000505459 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
SRP19-204ENST00000505459 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
SRP19-204ENST00000505459 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
SRP19-204ENST00000505459 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
SRP19-204ENST00000505459 SMARCA2P51531 1590 aa15.52■□□□□ 0.07
SRP19-204ENST00000505459 PEG3Q9GZU2 1588 aa15.51■□□□□ 0.07
SRP19-204ENST00000505459 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
SRP19-204ENST00000505459 PCGF6Q9BYE7 350 aa15.38■□□□□ 0.05
SRP19-204ENST00000505459 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
SRP19-204ENST00000505459 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
SRP19-204ENST00000505459 HRCP23327 699 aa15.3■□□□□ 0.04
SRP19-204ENST00000505459 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
SRP19-204ENST00000505459 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
SRP19-204ENST00000505459 EEA1Q15075 1411 aa15.14■□□□□ 0.01
SRP19-204ENST00000505459 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
SRP19-204ENST00000505459 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
SRP19-204ENST00000505459 SOGA1O94964 1423 aa15.12■□□□□ 0.01
SRP19-204ENST00000505459 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
SRP19-204ENST00000505459 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
SRP19-204ENST00000505459 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
SRP19-204ENST00000505459 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
SRP19-204ENST00000505459 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
SRP19-204ENST00000505459 TNIKQ9UKE5 1360 aa15.02□□□□□ -0.01
SRP19-204ENST00000505459 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
SRP19-204ENST00000505459 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
SRP19-204ENST00000505459 KIF21BO75037 1637 aa14.97□□□□□ -0.01
SRP19-204ENST00000505459 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
SRP19-204ENST00000505459 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
SRP19-204ENST00000505459 GOLGA3Q08378 1498 aa14.96□□□□□ -0.01
SRP19-204ENST00000505459 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
SRP19-204ENST00000505459 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
SRP19-204ENST00000505459 CEP164Q9UPV0 1460 aa14.91□□□□□ -0.02
SRP19-204ENST00000505459 CFTRP13569 1480 aa14.9□□□□□ -0.02
SRP19-204ENST00000505459 RANGAP1P46060 587 aaPredicted RBP14.87□□□□□ -0.03
SRP19-204ENST00000505459 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
SRP19-204ENST00000505459 CUX1P39880 1505 aa14.83□□□□□ -0.03
SRP19-204ENST00000505459 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
SRP19-204ENST00000505459 RAPGEF2Q9Y4G8 1499 aa14.78□□□□□ -0.04
SRP19-204ENST00000505459 ERICH3Q5RHP9 1530 aa14.77□□□□□ -0.05
SRP19-204ENST00000505459 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
SRP19-204ENST00000505459 CLIP1P30622 1438 aa14.73□□□□□ -0.05
SRP19-204ENST00000505459 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
SRP19-204ENST00000505459 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
SRP19-204ENST00000505459 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
SRP19-204ENST00000505459 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
SRP19-204ENST00000505459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
SRP19-204ENST00000505459 NESP48681 1621 aa14.64□□□□□ -0.07
SRP19-204ENST00000505459 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
SRP19-204ENST00000505459 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
SRP19-204ENST00000505459 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
SRP19-204ENST00000505459 CUX2O14529 1486 aa14.56□□□□□ -0.08
SRP19-204ENST00000505459 IGF1RP08069 1367 aa14.55□□□□□ -0.08
SRP19-204ENST00000505459 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
SRP19-204ENST00000505459 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
SRP19-204ENST00000505459 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
SRP19-204ENST00000505459 APLP2Q06481 763 aa14.5□□□□□ -0.09
SRP19-204ENST00000505459 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
SRP19-204ENST00000505459 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
SRP19-204ENST00000505459 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
SRP19-204ENST00000505459 ARHGAP35Q9NRY4 1499 aa14.47□□□□□ -0.09
SRP19-204ENST00000505459 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
SRP19-204ENST00000505459 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
SRP19-204ENST00000505459 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
SRP19-204ENST00000505459 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
SRP19-204ENST00000505459 KANK4Q5T7N3 995 aaPredicted RBP14.42□□□□□ -0.1
SRP19-204ENST00000505459 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
SRP19-204ENST00000505459 CUL7Q14999 1698 aa14.4□□□□□ -0.1
SRP19-204ENST00000505459 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
SRP19-204ENST00000505459 MAP3K1Q13233 1512 aa14.37□□□□□ -0.11
SRP19-204ENST00000505459 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
SRP19-204ENST00000505459 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
SRP19-204ENST00000505459 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
SRP19-204ENST00000505459 CTTNBP2Q8WZ74 1663 aa14.34□□□□□ -0.11
SRP19-204ENST00000505459 RRBP1Q9P2E9 1410 aaKnown RBP14.34□□□□□ -0.11
SRP19-204ENST00000505459 ABCA5Q8WWZ7 1642 aa14.33□□□□□ -0.11
SRP19-204ENST00000505459 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms