RNA–Protein interactions for RNA: ENST00000504881.1

SRFBP1-202, Transcript of serum response factor binding protein 1, humanhuman

TSL 3

Gene SRFBP1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-202ENST00000504881 AEBP2Q6ZN18 517 aaPredicted RBP28.11■■■□□ 2.09
SRFBP1-202ENST00000504881 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
SRFBP1-202ENST00000504881 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
SRFBP1-202ENST00000504881 PHF23Q9BUL5 403 aaPredicted RBP23.67■■□□□ 1.38
SRFBP1-202ENST00000504881 FOXD1Q16676 465 aa22.3■■□□□ 1.16
SRFBP1-202ENST00000504881 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
SRFBP1-202ENST00000504881 PPP6R1Q9UPN7 881 aa20.98■□□□□ 0.95
SRFBP1-202ENST00000504881 ADRA2BP18089 450 aa20.92■□□□□ 0.94
SRFBP1-202ENST00000504881 PIAS4Q8N2W9 510 aaPredicted RBP20.89■□□□□ 0.93
SRFBP1-202ENST00000504881 MSH5O43196 834 aa20.84■□□□□ 0.93
SRFBP1-202ENST00000504881 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
SRFBP1-202ENST00000504881 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
SRFBP1-202ENST00000504881 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
SRFBP1-202ENST00000504881 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
SRFBP1-202ENST00000504881 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
SRFBP1-202ENST00000504881 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
SRFBP1-202ENST00000504881 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
SRFBP1-202ENST00000504881 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
SRFBP1-202ENST00000504881 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
SRFBP1-202ENST00000504881 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
SRFBP1-202ENST00000504881 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
SRFBP1-202ENST00000504881 KCNA4P22459 653 aa17.82■□□□□ 0.44
SRFBP1-202ENST00000504881 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
SRFBP1-202ENST00000504881 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
SRFBP1-202ENST00000504881 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
SRFBP1-202ENST00000504881 C1QBPQ07021 282 aaKnown RBP17.55■□□□□ 0.4
SRFBP1-202ENST00000504881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
SRFBP1-202ENST00000504881 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
SRFBP1-202ENST00000504881 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
SRFBP1-202ENST00000504881 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
SRFBP1-202ENST00000504881 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
SRFBP1-202ENST00000504881 CAPN15O75808 1086 aa16.83■□□□□ 0.28
SRFBP1-202ENST00000504881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
SRFBP1-202ENST00000504881 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
SRFBP1-202ENST00000504881 APLP2Q06481 763 aa16.78■□□□□ 0.28
SRFBP1-202ENST00000504881 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
SRFBP1-202ENST00000504881 DSG3P32926 999 aa16.7■□□□□ 0.26
SRFBP1-202ENST00000504881 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
SRFBP1-202ENST00000504881 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
SRFBP1-202ENST00000504881 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
SRFBP1-202ENST00000504881 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
SRFBP1-202ENST00000504881 ABCB7O75027 752 aa16.44■□□□□ 0.22
SRFBP1-202ENST00000504881 ZBTB22O15209 634 aa16.4■□□□□ 0.22
SRFBP1-202ENST00000504881 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
SRFBP1-202ENST00000504881 POLA2Q14181 598 aa16.21■□□□□ 0.19
SRFBP1-202ENST00000504881 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
SRFBP1-202ENST00000504881 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
SRFBP1-202ENST00000504881 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
SRFBP1-202ENST00000504881 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
SRFBP1-202ENST00000504881 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
SRFBP1-202ENST00000504881 POTEHQ6S545 545 aa15.69■□□□□ 0.1
SRFBP1-202ENST00000504881 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
SRFBP1-202ENST00000504881 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
SRFBP1-202ENST00000504881 FBLN2P98095 1184 aa15.62■□□□□ 0.09
SRFBP1-202ENST00000504881 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
SRFBP1-202ENST00000504881 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
SRFBP1-202ENST00000504881 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
SRFBP1-202ENST00000504881 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
SRFBP1-202ENST00000504881 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
SRFBP1-202ENST00000504881 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
SRFBP1-202ENST00000504881 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
SRFBP1-202ENST00000504881 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
SRFBP1-202ENST00000504881 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
SRFBP1-202ENST00000504881 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
SRFBP1-202ENST00000504881 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
SRFBP1-202ENST00000504881 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
SRFBP1-202ENST00000504881 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
SRFBP1-202ENST00000504881 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
SRFBP1-202ENST00000504881 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
SRFBP1-202ENST00000504881 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
SRFBP1-202ENST00000504881 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
SRFBP1-202ENST00000504881 HAX1O00165 279 aa14.83□□□□□ -0.04
SRFBP1-202ENST00000504881 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
SRFBP1-202ENST00000504881 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
SRFBP1-202ENST00000504881 STAG3Q9UJ98 1225 aa14.72□□□□□ -0.05
SRFBP1-202ENST00000504881 C19orf67A6NJJ6 358 aa14.65□□□□□ -0.06
SRFBP1-202ENST00000504881 EVX2Q03828 476 aa14.65□□□□□ -0.06
SRFBP1-202ENST00000504881 PROM2Q8N271 834 aa14.61□□□□□ -0.07
SRFBP1-202ENST00000504881 FARP1Q9Y4F1 1045 aaPredicted RBP14.59□□□□□ -0.07
SRFBP1-202ENST00000504881 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
SRFBP1-202ENST00000504881 CD44P16070 742 aaKnown RBP14.44□□□□□ -0.1
SRFBP1-202ENST00000504881 GABBR2O75899 941 aa14.36□□□□□ -0.11
SRFBP1-202ENST00000504881 MNX1P50219 401 aaPredicted RBP14.33□□□□□ -0.12
SRFBP1-202ENST00000504881 FKBP8Q14318 412 aa14.32□□□□□ -0.12
SRFBP1-202ENST00000504881 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRFBP1-202ENST00000504881 CLCN6P51797 869 aa14.27□□□□□ -0.13
SRFBP1-202ENST00000504881 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
SRFBP1-202ENST00000504881 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
SRFBP1-202ENST00000504881 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
SRFBP1-202ENST00000504881 PLEKHG5O94827 1062 aa14.16□□□□□ -0.14
SRFBP1-202ENST00000504881 MIER1Q8N108 512 aa14.16□□□□□ -0.14
SRFBP1-202ENST00000504881 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
SRFBP1-202ENST00000504881 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
SRFBP1-202ENST00000504881 POTEIP0CG38 1075 aa14.05□□□□□ -0.16
SRFBP1-202ENST00000504881 GALR2O43603 387 aaPredicted RBP14.03□□□□□ -0.16
SRFBP1-202ENST00000504881 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
SRFBP1-202ENST00000504881 DCBLD2Q96PD2 775 aa14.01□□□□□ -0.17
SRFBP1-202ENST00000504881 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
SRFBP1-202ENST00000504881 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
SRFBP1-202ENST00000504881 CCDC61Q9Y6R9 512 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms