RNA–Protein interactions for RNA: ENST00000504458.1

SERF1A-204, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4 BASIC

Gene SERF1A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-204ENST00000504458 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
SERF1A-204ENST00000504458 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
SERF1A-204ENST00000504458 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
SERF1A-204ENST00000504458 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
SERF1A-204ENST00000504458 FOXD1Q16676 465 aa16.19■□□□□ 0.18
SERF1A-204ENST00000504458 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
SERF1A-204ENST00000504458 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
SERF1A-204ENST00000504458 ADRA2BP18089 450 aa15.4■□□□□ 0.06
SERF1A-204ENST00000504458 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
SERF1A-204ENST00000504458 MSH5O43196 834 aa15.09■□□□□ 0.01
SERF1A-204ENST00000504458 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
SERF1A-204ENST00000504458 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
SERF1A-204ENST00000504458 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
SERF1A-204ENST00000504458 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
SERF1A-204ENST00000504458 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
SERF1A-204ENST00000504458 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
SERF1A-204ENST00000504458 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
SERF1A-204ENST00000504458 KCNA4P22459 653 aa13.6□□□□□ -0.23
SERF1A-204ENST00000504458 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
SERF1A-204ENST00000504458 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
SERF1A-204ENST00000504458 NPM3O75607 178 aaKnown RBP13.51□□□□□ -0.25
SERF1A-204ENST00000504458 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
SERF1A-204ENST00000504458 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
SERF1A-204ENST00000504458 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
SERF1A-204ENST00000504458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
SERF1A-204ENST00000504458 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
SERF1A-204ENST00000504458 NISCHQ9Y2I1 1504 aa12.8□□□□□ -0.36
SERF1A-204ENST00000504458 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
SERF1A-204ENST00000504458 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
SERF1A-204ENST00000504458 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
SERF1A-204ENST00000504458 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
SERF1A-204ENST00000504458 FOXD4L1Q9NU39 408 aa12.62□□□□□ -0.39
SERF1A-204ENST00000504458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
SERF1A-204ENST00000504458 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
SERF1A-204ENST00000504458 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
SERF1A-204ENST00000504458 APLP2Q06481 763 aa12.5□□□□□ -0.41
SERF1A-204ENST00000504458 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
SERF1A-204ENST00000504458 ZBTB22O15209 634 aa12.47□□□□□ -0.41
SERF1A-204ENST00000504458 CAPN15O75808 1086 aa12.35□□□□□ -0.43
SERF1A-204ENST00000504458 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
SERF1A-204ENST00000504458 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
SERF1A-204ENST00000504458 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
SERF1A-204ENST00000504458 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
SERF1A-204ENST00000504458 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
SERF1A-204ENST00000504458 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
SERF1A-204ENST00000504458 DSG3P32926 999 aa12.17□□□□□ -0.46
SERF1A-204ENST00000504458 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
SERF1A-204ENST00000504458 ABCB7O75027 752 aa12.06□□□□□ -0.48
SERF1A-204ENST00000504458 POLA2Q14181 598 aa12.01□□□□□ -0.49
SERF1A-204ENST00000504458 ABCC9O60706 1549 aa11.92□□□□□ -0.5
SERF1A-204ENST00000504458 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
SERF1A-204ENST00000504458 FBLN2P98095 1184 aa11.74□□□□□ -0.53
SERF1A-204ENST00000504458 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
SERF1A-204ENST00000504458 MKRN4PQ13434 485 aaPredicted RBP11.6□□□□□ -0.55
SERF1A-204ENST00000504458 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
SERF1A-204ENST00000504458 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.57
SERF1A-204ENST00000504458 SPDYE6P0CI01 402 aa11.52□□□□□ -0.57
SERF1A-204ENST00000504458 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
SERF1A-204ENST00000504458 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
SERF1A-204ENST00000504458 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
SERF1A-204ENST00000504458 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
SERF1A-204ENST00000504458 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
SERF1A-204ENST00000504458 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
SERF1A-204ENST00000504458 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
SERF1A-204ENST00000504458 DCAF8L2P0C7V8 631 aa11.27□□□□□ -0.61
SERF1A-204ENST00000504458 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
SERF1A-204ENST00000504458 SPDYE1Q8NFV5 336 aaPredicted RBP11.22□□□□□ -0.61
SERF1A-204ENST00000504458 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
SERF1A-204ENST00000504458 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
SERF1A-204ENST00000504458 FKBP8Q14318 412 aa11.15□□□□□ -0.62
SERF1A-204ENST00000504458 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
SERF1A-204ENST00000504458 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
SERF1A-204ENST00000504458 PROM2Q8N271 834 aa11.1□□□□□ -0.63
SERF1A-204ENST00000504458 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
SERF1A-204ENST00000504458 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
SERF1A-204ENST00000504458 POTEHQ6S545 545 aa11.04□□□□□ -0.64
SERF1A-204ENST00000504458 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
SERF1A-204ENST00000504458 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
SERF1A-204ENST00000504458 PRKAR2AP13861 404 aaKnown RBP10.91□□□□□ -0.66
SERF1A-204ENST00000504458 NACADO15069 1562 aa10.9□□□□□ -0.67
SERF1A-204ENST00000504458 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
SERF1A-204ENST00000504458 ZCCHC6Q5VYS8 1495 aaKnown RBP10.84□□□□□ -0.67
SERF1A-204ENST00000504458 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
SERF1A-204ENST00000504458 CREBZFQ9NS37 354 aa10.81□□□□□ -0.68
SERF1A-204ENST00000504458 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
SERF1A-204ENST00000504458 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
SERF1A-204ENST00000504458 MIER1Q8N108 512 aa10.76□□□□□ -0.69
SERF1A-204ENST00000504458 DNAJC5Q9H3Z4 198 aa10.75□□□□□ -0.69
SERF1A-204ENST00000504458 CECR2Q9BXF3 1484 aa10.74□□□□□ -0.69
SERF1A-204ENST00000504458 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
SERF1A-204ENST00000504458 HAX1O00165 279 aa10.72□□□□□ -0.69
SERF1A-204ENST00000504458 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
SERF1A-204ENST00000504458 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
SERF1A-204ENST00000504458 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
SERF1A-204ENST00000504458 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
SERF1A-204ENST00000504458 BICRAQ9NZM4 1560 aa10.66□□□□□ -0.7
SERF1A-204ENST00000504458 DCAF1Q9Y4B6 1507 aa10.66□□□□□ -0.7
SERF1A-204ENST00000504458 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
SERF1A-204ENST00000504458 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
SERF1A-204ENST00000504458 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms