RNA–Protein interactions for RNA: ENST00000503595.1

SIMC1-209, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 3

Gene SIMC1, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-209ENST00000503595 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
SIMC1-209ENST00000503595 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
SIMC1-209ENST00000503595 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
SIMC1-209ENST00000503595 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
SIMC1-209ENST00000503595 FOXD1Q16676 465 aa13.89□□□□□ -0.19
SIMC1-209ENST00000503595 MSH5O43196 834 aa13.16□□□□□ -0.3
SIMC1-209ENST00000503595 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
SIMC1-209ENST00000503595 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
SIMC1-209ENST00000503595 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
SIMC1-209ENST00000503595 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
SIMC1-209ENST00000503595 ADRA2BP18089 450 aa12.75□□□□□ -0.37
SIMC1-209ENST00000503595 DMRT2Q9Y5R5 561 aa11.8□□□□□ -0.52
SIMC1-209ENST00000503595 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
SIMC1-209ENST00000503595 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
SIMC1-209ENST00000503595 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
SIMC1-209ENST00000503595 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
SIMC1-209ENST00000503595 PPP4R3CPQ6ZMV5 832 aa11.34□□□□□ -0.59
SIMC1-209ENST00000503595 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
SIMC1-209ENST00000503595 HOXD11P31277 338 aaPredicted RBP11.29□□□□□ -0.6
SIMC1-209ENST00000503595 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
SIMC1-209ENST00000503595 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
SIMC1-209ENST00000503595 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
SIMC1-209ENST00000503595 KCNA4P22459 653 aa11.14□□□□□ -0.63
SIMC1-209ENST00000503595 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.65
SIMC1-209ENST00000503595 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
SIMC1-209ENST00000503595 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
SIMC1-209ENST00000503595 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
SIMC1-209ENST00000503595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
SIMC1-209ENST00000503595 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
SIMC1-209ENST00000503595 NPM3O75607 178 aaKnown RBP10.68□□□□□ -0.7
SIMC1-209ENST00000503595 CSRNP3Q8WYN3 585 aa10.66□□□□□ -0.7
SIMC1-209ENST00000503595 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
SIMC1-209ENST00000503595 CAPN15O75808 1086 aa10.4□□□□□ -0.74
SIMC1-209ENST00000503595 DSG3P32926 999 aa10.38□□□□□ -0.75
SIMC1-209ENST00000503595 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
SIMC1-209ENST00000503595 APLP2Q06481 763 aa10.28□□□□□ -0.76
SIMC1-209ENST00000503595 ZBTB22O15209 634 aa10.27□□□□□ -0.77
SIMC1-209ENST00000503595 POTEHQ6S545 545 aa10.25□□□□□ -0.77
SIMC1-209ENST00000503595 SLC4A2P04920 1241 aa10.23□□□□□ -0.77
SIMC1-209ENST00000503595 ZNF219Q9P2Y4 722 aaPredicted RBP10.21□□□□□ -0.77
SIMC1-209ENST00000503595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
SIMC1-209ENST00000503595 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
SIMC1-209ENST00000503595 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
SIMC1-209ENST00000503595 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
SIMC1-209ENST00000503595 ABCB7O75027 752 aa10.11□□□□□ -0.79
SIMC1-209ENST00000503595 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
SIMC1-209ENST00000503595 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
SIMC1-209ENST00000503595 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
SIMC1-209ENST00000503595 MYCNP04198 464 aaPredicted RBP9.93□□□□□ -0.82
SIMC1-209ENST00000503595 ABCC9O60706 1549 aa9.89□□□□□ -0.83
SIMC1-209ENST00000503595 POLA2Q14181 598 aa9.85□□□□□ -0.83
SIMC1-209ENST00000503595 CHRDL2Q6WN34 429 aa9.79□□□□□ -0.84
SIMC1-209ENST00000503595 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
SIMC1-209ENST00000503595 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
SIMC1-209ENST00000503595 ZBTB12Q9Y330 459 aaPredicted RBP9.72□□□□□ -0.85
SIMC1-209ENST00000503595 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
SIMC1-209ENST00000503595 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
SIMC1-209ENST00000503595 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
SIMC1-209ENST00000503595 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
SIMC1-209ENST00000503595 ZCCHC6Q5VYS8 1495 aaKnown RBP9.66□□□□□ -0.86
SIMC1-209ENST00000503595 ATF5Q9Y2D1 282 aaPredicted RBP9.63□□□□□ -0.87
SIMC1-209ENST00000503595 FKBP8Q14318 412 aa9.57□□□□□ -0.88
SIMC1-209ENST00000503595 REM2Q8IYK8 340 aaPredicted RBP9.55□□□□□ -0.88
SIMC1-209ENST00000503595 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
SIMC1-209ENST00000503595 DCAF1Q9Y4B6 1507 aa9.53□□□□□ -0.88
SIMC1-209ENST00000503595 SP7Q8TDD2 431 aaPredicted RBP9.53□□□□□ -0.88
SIMC1-209ENST00000503595 PIP4P2Q8N4L2 257 aa9.5□□□□□ -0.89
SIMC1-209ENST00000503595 PITPNM1O00562 1244 aa9.45□□□□□ -0.9
SIMC1-209ENST00000503595 FXR2P51116 673 aaKnown RBP eCLIP9.42□□□□□ -0.9
SIMC1-209ENST00000503595 HAX1O00165 279 aa9.38□□□□□ -0.91
SIMC1-209ENST00000503595 MYO15BQ96JP2 1530 aa9.37□□□□□ -0.91
SIMC1-209ENST00000503595 FBLN2P98095 1184 aa9.37□□□□□ -0.91
SIMC1-209ENST00000503595 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
SIMC1-209ENST00000503595 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
SIMC1-209ENST00000503595 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
SIMC1-209ENST00000503595 SHROOM4Q9ULL8 1493 aa9.32□□□□□ -0.92
SIMC1-209ENST00000503595 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
SIMC1-209ENST00000503595 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
SIMC1-209ENST00000503595 NACADO15069 1562 aa9.21□□□□□ -0.93
SIMC1-209ENST00000503595 PRKAR2AP13861 404 aaKnown RBP9.21□□□□□ -0.94
SIMC1-209ENST00000503595 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
SIMC1-209ENST00000503595 CLEC11AQ9Y240 323 aa9.2□□□□□ -0.94
SIMC1-209ENST00000503595 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
SIMC1-209ENST00000503595 EVX2Q03828 476 aa9.19□□□□□ -0.94
SIMC1-209ENST00000503595 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
SIMC1-209ENST00000503595 C19orf67A6NJJ6 358 aa9.13□□□□□ -0.95
SIMC1-209ENST00000503595 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
SIMC1-209ENST00000503595 RB1CC1Q8TDY2 1594 aa9.12□□□□□ -0.95
SIMC1-209ENST00000503595 SUPT5HO00267 1087 aaKnown RBP9.09□□□□□ -0.95
SIMC1-209ENST00000503595 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
SIMC1-209ENST00000503595 PROM2Q8N271 834 aa9.07□□□□□ -0.96
SIMC1-209ENST00000503595 SPDYE4A6NLX3 237 aa9.06□□□□□ -0.96
SIMC1-209ENST00000503595 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
SIMC1-209ENST00000503595 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
SIMC1-209ENST00000503595 GABBR2O75899 941 aa9.03□□□□□ -0.96
SIMC1-209ENST00000503595 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
SIMC1-209ENST00000503595 CECR2Q9BXF3 1484 aa9□□□□□ -0.97
SIMC1-209ENST00000503595 VASPP50552 380 aaPredicted RBP8.98□□□□□ -0.97
SIMC1-209ENST00000503595 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
SIMC1-209ENST00000503595 TRIM41Q8WV44 630 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms