RNA–Protein interactions for RNA: ENST00000503548.1

UVSSA-203, Transcript of UV stimulated scaffold protein A, humanhuman

TSL 2

Gene UVSSA, Length 4,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UVSSA-203ENST00000503548 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
UVSSA-203ENST00000503548 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
UVSSA-203ENST00000503548 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
UVSSA-203ENST00000503548 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
UVSSA-203ENST00000503548 PCGF6Q9BYE7 350 aa25.71■■□□□ 1.71
UVSSA-203ENST00000503548 ZEB1P37275 1124 aaPredicted RBP25.62■■□□□ 1.69
UVSSA-203ENST00000503548 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
UVSSA-203ENST00000503548 EHMT2Q96KQ7 1210 aa25.32■■□□□ 1.64
UVSSA-203ENST00000503548 APLP2Q06481 763 aa25.23■■□□□ 1.63
UVSSA-203ENST00000503548 FAM9AQ8IZU1 332 aaPredicted RBP25.19■■□□□ 1.62
UVSSA-203ENST00000503548 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
UVSSA-203ENST00000503548 HRCP23327 699 aa25.18■■□□□ 1.62
UVSSA-203ENST00000503548 CENPBP07199 599 aaPredicted RBP25.16■■□□□ 1.62
UVSSA-203ENST00000503548 TRIM26Q12899 539 aaPredicted RBP25.01■■□□□ 1.59
UVSSA-203ENST00000503548 CCER1Q8TC90 406 aaPredicted RBP24.93■■□□□ 1.58
UVSSA-203ENST00000503548 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
UVSSA-203ENST00000503548 MYT1Q01538 1121 aa24.85■■□□□ 1.57
UVSSA-203ENST00000503548 TTBK1Q5TCY1 1321 aaPredicted RBP24.63■■□□□ 1.53
UVSSA-203ENST00000503548 UBTFP17480 764 aaKnown RBP24.52■■□□□ 1.52
UVSSA-203ENST00000503548 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
UVSSA-203ENST00000503548 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
UVSSA-203ENST00000503548 YTHDC1Q96MU7 727 aaKnown RBP24.17■■□□□ 1.46
UVSSA-203ENST00000503548 RANGAP1P46060 587 aaPredicted RBP24.16■■□□□ 1.46
UVSSA-203ENST00000503548 NEFLP07196 543 aa24.16■■□□□ 1.46
UVSSA-203ENST00000503548 ERICH6Q7L0X2 663 aa24.16■■□□□ 1.46
UVSSA-203ENST00000503548 DIEXFQ68CQ4 756 aaKnown RBP23.95■■□□□ 1.42
UVSSA-203ENST00000503548 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
UVSSA-203ENST00000503548 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
UVSSA-203ENST00000503548 ATP1B4Q9UN42 357 aaPredicted RBP23.87■■□□□ 1.41
UVSSA-203ENST00000503548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.86■■□□□ 1.41
UVSSA-203ENST00000503548 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
UVSSA-203ENST00000503548 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
UVSSA-203ENST00000503548 GTF3C3Q9Y5Q9 886 aa23.55■■□□□ 1.36
UVSSA-203ENST00000503548 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
UVSSA-203ENST00000503548 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
UVSSA-203ENST00000503548 ITGAEP38570 1179 aa23.5■■□□□ 1.35
UVSSA-203ENST00000503548 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
UVSSA-203ENST00000503548 ABCC9O60706 1549 aa23.34■■□□□ 1.33
UVSSA-203ENST00000503548 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.32
UVSSA-203ENST00000503548 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
UVSSA-203ENST00000503548 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
UVSSA-203ENST00000503548 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
UVSSA-203ENST00000503548 ANP32CO43423 234 aa23.1■■□□□ 1.29
UVSSA-203ENST00000503548 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
UVSSA-203ENST00000503548 MYT1LQ9UL68 1186 aa23.02■■□□□ 1.28
UVSSA-203ENST00000503548 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
UVSSA-203ENST00000503548 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
UVSSA-203ENST00000503548 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
UVSSA-203ENST00000503548 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
UVSSA-203ENST00000503548 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
UVSSA-203ENST00000503548 RTL5Q5HYW3 569 aaPredicted RBP22.94■■□□□ 1.26
UVSSA-203ENST00000503548 EEA1Q15075 1411 aa22.94■■□□□ 1.26
UVSSA-203ENST00000503548 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
UVSSA-203ENST00000503548 BCANQ96GW7 911 aa22.86■■□□□ 1.25
UVSSA-203ENST00000503548 TRIM52Q96A61 297 aa22.84■■□□□ 1.25
UVSSA-203ENST00000503548 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
UVSSA-203ENST00000503548 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
UVSSA-203ENST00000503548 GOLGA3Q08378 1498 aa22.7■■□□□ 1.23
UVSSA-203ENST00000503548 CLIP1P30622 1438 aa22.69■■□□□ 1.22
UVSSA-203ENST00000503548 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
UVSSA-203ENST00000503548 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
UVSSA-203ENST00000503548 MIER1Q8N108 512 aa22.63■■□□□ 1.21
UVSSA-203ENST00000503548 NACADO15069 1562 aa22.63■■□□□ 1.21
UVSSA-203ENST00000503548 TONSLQ96HA7 1378 aa22.61■■□□□ 1.21
UVSSA-203ENST00000503548 FKBP8Q14318 412 aa22.59■■□□□ 1.21
UVSSA-203ENST00000503548 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
UVSSA-203ENST00000503548 DDX10Q13206 875 aaKnown RBP22.49■■□□□ 1.19
UVSSA-203ENST00000503548 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
UVSSA-203ENST00000503548 P3H3Q8IVL6 736 aa22.46■■□□□ 1.19
UVSSA-203ENST00000503548 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
UVSSA-203ENST00000503548 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
UVSSA-203ENST00000503548 HNRNPUQ00839 825 aaKnown RBP eCLIP22.41■■□□□ 1.18
UVSSA-203ENST00000503548 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
UVSSA-203ENST00000503548 FBLN2P98095 1184 aa22.4■■□□□ 1.18
UVSSA-203ENST00000503548 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
UVSSA-203ENST00000503548 SLC4A1APQ9BWU0 796 aaKnown RBP22.22■■□□□ 1.15
UVSSA-203ENST00000503548 MTUS2Q5JR59 1369 aa22.21■■□□□ 1.15
UVSSA-203ENST00000503548 KIF27Q86VH2 1401 aa22.2■■□□□ 1.14
UVSSA-203ENST00000503548 FAM9BQ8IZU0 186 aa22.17■■□□□ 1.14
UVSSA-203ENST00000503548 TIMELESSQ9UNS1 1208 aa22.15■■□□□ 1.14
UVSSA-203ENST00000503548 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
UVSSA-203ENST00000503548 ANP32EQ9BTT0 268 aa22.14■■□□□ 1.14
UVSSA-203ENST00000503548 EIF4G2P78344 907 aaKnown RBP eCLIP22.14■■□□□ 1.13
UVSSA-203ENST00000503548 VPS8Q8N3P4 1428 aa22.13■■□□□ 1.13
UVSSA-203ENST00000503548 MRS2Q9HD23 443 aa22.13■■□□□ 1.13
UVSSA-203ENST00000503548 CCDC136Q96JN2 1154 aa22.12■■□□□ 1.13
UVSSA-203ENST00000503548 SOGA1O94964 1423 aa22.1■■□□□ 1.13
UVSSA-203ENST00000503548 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
UVSSA-203ENST00000503548 CANXP27824 592 aaKnown RBP22.09■■□□□ 1.13
UVSSA-203ENST00000503548 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
UVSSA-203ENST00000503548 TMC1Q8TDI8 760 aa22.06■■□□□ 1.12
UVSSA-203ENST00000503548 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
UVSSA-203ENST00000503548 ZBTB47Q9UFB7 747 aaPredicted RBP22.06■■□□□ 1.12
UVSSA-203ENST00000503548 ZNF777Q9ULD5 760 aaPredicted RBP22.05■■□□□ 1.12
UVSSA-203ENST00000503548 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
UVSSA-203ENST00000503548 ARID3CA6NKF2 412 aa22.01■■□□□ 1.11
UVSSA-203ENST00000503548 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
UVSSA-203ENST00000503548 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
UVSSA-203ENST00000503548 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
UVSSA-203ENST00000503548 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms