RNA–Protein interactions for RNA: ENST00000503337.1

ABCC3-205, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 1 (best)

Gene ABCC3, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-205ENST00000503337 NISCHQ9Y2I1 1504 aa29.06■■■□□ 2.24
ABCC3-205ENST00000503337 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
ABCC3-205ENST00000503337 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
ABCC3-205ENST00000503337 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
ABCC3-205ENST00000503337 ABCC9O60706 1549 aa24.23■■□□□ 1.47
ABCC3-205ENST00000503337 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
ABCC3-205ENST00000503337 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
ABCC3-205ENST00000503337 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
ABCC3-205ENST00000503337 MYO15BQ96JP2 1530 aa23.74■■□□□ 1.39
ABCC3-205ENST00000503337 NACADO15069 1562 aa23.69■■□□□ 1.38
ABCC3-205ENST00000503337 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
ABCC3-205ENST00000503337 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
ABCC3-205ENST00000503337 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
ABCC3-205ENST00000503337 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
ABCC3-205ENST00000503337 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
ABCC3-205ENST00000503337 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
ABCC3-205ENST00000503337 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.244e-8■■■■■ 30
ABCC3-205ENST00000503337 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
ABCC3-205ENST00000503337 MROH2BQ7Z745 1585 aa22.49■■□□□ 1.19
ABCC3-205ENST00000503337 HRCP23327 699 aa22.47■■□□□ 1.19
ABCC3-205ENST00000503337 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
ABCC3-205ENST00000503337 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
ABCC3-205ENST00000503337 TRIM41Q8WV44 630 aa22.41■■□□□ 1.18
ABCC3-205ENST00000503337 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
ABCC3-205ENST00000503337 WIZO95785 1651 aa22.38■■□□□ 1.17
ABCC3-205ENST00000503337 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
ABCC3-205ENST00000503337 EIF4G1Q04637 1599 aaKnown RBP22.18■■□□□ 1.14
ABCC3-205ENST00000503337 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
ABCC3-205ENST00000503337 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
ABCC3-205ENST00000503337 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
ABCC3-205ENST00000503337 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
ABCC3-205ENST00000503337 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
ABCC3-205ENST00000503337 SMARCA2P51531 1590 aa22.01■■□□□ 1.11
ABCC3-205ENST00000503337 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
ABCC3-205ENST00000503337 CC2D2AQ9P2K1 1620 aa21.92■■□□□ 1.1
ABCC3-205ENST00000503337 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
ABCC3-205ENST00000503337 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
ABCC3-205ENST00000503337 HMGXB3Q12766 1538 aa21.83■■□□□ 1.09
ABCC3-205ENST00000503337 ZEB1P37275 1124 aaPredicted RBP21.8■■□□□ 1.08
ABCC3-205ENST00000503337 ABCC8Q09428 1581 aa21.79■■□□□ 1.08
ABCC3-205ENST00000503337 PPARGC1BQ86YN6 1023 aaKnown RBP21.78■■□□□ 1.08
ABCC3-205ENST00000503337 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
ABCC3-205ENST00000503337 EEA1Q15075 1411 aa21.71■■□□□ 1.07
ABCC3-205ENST00000503337 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
ABCC3-205ENST00000503337 SOGA1O94964 1423 aa21.54■■□□□ 1.04
ABCC3-205ENST00000503337 WRNQ14191 1432 aaPredicted RBP eCLIP21.54■■□□□ 1.04
ABCC3-205ENST00000503337 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
ABCC3-205ENST00000503337 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
ABCC3-205ENST00000503337 CEP162Q5TB80 1403 aa21.5■■□□□ 1.03
ABCC3-205ENST00000503337 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
ABCC3-205ENST00000503337 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
ABCC3-205ENST00000503337 SYNJ1O43426 1573 aa21.41■■□□□ 1.02
ABCC3-205ENST00000503337 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
ABCC3-205ENST00000503337 KIF21BO75037 1637 aa21.37■■□□□ 1.01
ABCC3-205ENST00000503337 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
ABCC3-205ENST00000503337 UBTFP17480 764 aaKnown RBP21.34■■□□□ 1.01
ABCC3-205ENST00000503337 CFTRP13569 1480 aa21.32■■□□□ 1
ABCC3-205ENST00000503337 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
ABCC3-205ENST00000503337 TOP2BQ02880 1626 aa21.25■□□□□ 0.99
ABCC3-205ENST00000503337 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
ABCC3-205ENST00000503337 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
ABCC3-205ENST00000503337 NESP48681 1621 aa21.2■□□□□ 0.98
ABCC3-205ENST00000503337 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
ABCC3-205ENST00000503337 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
ABCC3-205ENST00000503337 CLIP1P30622 1438 aa21.14■□□□□ 0.97
ABCC3-205ENST00000503337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.13■□□□□ 0.97
ABCC3-205ENST00000503337 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
ABCC3-205ENST00000503337 VPS8Q8N3P4 1428 aa21.07■□□□□ 0.96
ABCC3-205ENST00000503337 RAPGEF2Q9Y4G8 1499 aa21.07■□□□□ 0.96
ABCC3-205ENST00000503337 TTBK1Q5TCY1 1321 aaPredicted RBP21.06■□□□□ 0.96
ABCC3-205ENST00000503337 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
ABCC3-205ENST00000503337 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
ABCC3-205ENST00000503337 CUX1P39880 1505 aa20.98■□□□□ 0.95
ABCC3-205ENST00000503337 KIF21AQ7Z4S6 1674 aa20.97■□□□□ 0.95
ABCC3-205ENST00000503337 APLP2Q06481 763 aa20.97■□□□□ 0.95
ABCC3-205ENST00000503337 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
ABCC3-205ENST00000503337 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
ABCC3-205ENST00000503337 MYT1Q01538 1121 aa20.86■□□□□ 0.93
ABCC3-205ENST00000503337 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
ABCC3-205ENST00000503337 URB2Q14146 1524 aaKnown RBP20.83■□□□□ 0.92
ABCC3-205ENST00000503337 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
ABCC3-205ENST00000503337 ARAP1Q96P48 1450 aa20.8■□□□□ 0.92
ABCC3-205ENST00000503337 ERCC6Q03468 1493 aa20.79■□□□□ 0.92
ABCC3-205ENST00000503337 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
ABCC3-205ENST00000503337 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
ABCC3-205ENST00000503337 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
ABCC3-205ENST00000503337 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
ABCC3-205ENST00000503337 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
ABCC3-205ENST00000503337 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
ABCC3-205ENST00000503337 CUX2O14529 1486 aa20.68■□□□□ 0.9
ABCC3-205ENST00000503337 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
ABCC3-205ENST00000503337 WDR62O43379 1518 aa20.66■□□□□ 0.9
ABCC3-205ENST00000503337 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
ABCC3-205ENST00000503337 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.9
ABCC3-205ENST00000503337 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
ABCC3-205ENST00000503337 IGF1RP08069 1367 aa20.61■□□□□ 0.89
ABCC3-205ENST00000503337 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
ABCC3-205ENST00000503337 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
ABCC3-205ENST00000503337 RRBP1Q9P2E9 1410 aaKnown RBP20.57■□□□□ 0.88
ABCC3-205ENST00000503337 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms