RNA–Protein interactions for RNA: ENST00000497675.2

FAAP20-214, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 4,478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-214ENST00000497675 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
FAAP20-214ENST00000497675 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
FAAP20-214ENST00000497675 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
FAAP20-214ENST00000497675 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
FAAP20-214ENST00000497675 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.43
FAAP20-214ENST00000497675 ABCC9O60706 1549 aa23.8■■□□□ 1.4
FAAP20-214ENST00000497675 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
FAAP20-214ENST00000497675 APLP2Q06481 763 aa23.54■■□□□ 1.36
FAAP20-214ENST00000497675 PABPN1Q86U42 306 aaKnown RBP eCLIP23.37■■□□□ 1.33
FAAP20-214ENST00000497675 TRIM41Q8WV44 630 aa23.2■■□□□ 1.3
FAAP20-214ENST00000497675 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.3
FAAP20-214ENST00000497675 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
FAAP20-214ENST00000497675 UBTFP17480 764 aaKnown RBP22.95■■□□□ 1.26
FAAP20-214ENST00000497675 TTBK1Q5TCY1 1321 aaPredicted RBP22.74■■□□□ 1.23
FAAP20-214ENST00000497675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
FAAP20-214ENST00000497675 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
FAAP20-214ENST00000497675 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
FAAP20-214ENST00000497675 FBLN2P98095 1184 aa22.4■■□□□ 1.18
FAAP20-214ENST00000497675 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
FAAP20-214ENST00000497675 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
FAAP20-214ENST00000497675 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
FAAP20-214ENST00000497675 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.13
FAAP20-214ENST00000497675 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
FAAP20-214ENST00000497675 NACADO15069 1562 aa21.93■■□□□ 1.1
FAAP20-214ENST00000497675 ITGAEP38570 1179 aa21.92■■□□□ 1.1
FAAP20-214ENST00000497675 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
FAAP20-214ENST00000497675 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
FAAP20-214ENST00000497675 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
FAAP20-214ENST00000497675 NPM1P06748 294 aaKnown RBP eCLIP21.82■■□□□ 1.08
FAAP20-214ENST00000497675 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
FAAP20-214ENST00000497675 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
FAAP20-214ENST00000497675 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
FAAP20-214ENST00000497675 P3H3Q8IVL6 736 aa21.58■■□□□ 1.05
FAAP20-214ENST00000497675 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
FAAP20-214ENST00000497675 FAM50AQ14320 339 aaKnown RBP21.57■■□□□ 1.04
FAAP20-214ENST00000497675 ARID3CA6NKF2 412 aa21.56■■□□□ 1.04
FAAP20-214ENST00000497675 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
FAAP20-214ENST00000497675 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
FAAP20-214ENST00000497675 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
FAAP20-214ENST00000497675 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
FAAP20-214ENST00000497675 TRIM52Q96A61 297 aa21.42■■□□□ 1.02
FAAP20-214ENST00000497675 POLR3GLQ9BT43 218 aa21.4■■□□□ 1.02
FAAP20-214ENST00000497675 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
FAAP20-214ENST00000497675 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
FAAP20-214ENST00000497675 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
FAAP20-214ENST00000497675 SLC4A1APQ9BWU0 796 aaKnown RBP21.33■■□□□ 1
FAAP20-214ENST00000497675 BCANQ96GW7 911 aa21.31■■□□□ 1
FAAP20-214ENST00000497675 DCAF1Q9Y4B6 1507 aa21.28■■□□□ 1
FAAP20-214ENST00000497675 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
FAAP20-214ENST00000497675 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
FAAP20-214ENST00000497675 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
FAAP20-214ENST00000497675 STAG3Q9UJ98 1225 aa21.11■□□□□ 0.97
FAAP20-214ENST00000497675 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
FAAP20-214ENST00000497675 TRHP20396 242 aaPredicted RBP21.06■□□□□ 0.96
FAAP20-214ENST00000497675 CECR2Q9BXF3 1484 aa21.06■□□□□ 0.96
FAAP20-214ENST00000497675 KCNH8Q96L42 1107 aa21.03■□□□□ 0.96
FAAP20-214ENST00000497675 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.95
FAAP20-214ENST00000497675 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.95
FAAP20-214ENST00000497675 PLEKHD1A6NEE1 506 aa20.98■□□□□ 0.95
FAAP20-214ENST00000497675 TSPY4P0CV99 314 aa20.98■□□□□ 0.95
FAAP20-214ENST00000497675 TSPY10P0CW01 314 aa20.98■□□□□ 0.95
FAAP20-214ENST00000497675 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
FAAP20-214ENST00000497675 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
FAAP20-214ENST00000497675 MYO15BQ96JP2 1530 aa20.95■□□□□ 0.94
FAAP20-214ENST00000497675 SMARCA2P51531 1590 aa20.94■□□□□ 0.94
FAAP20-214ENST00000497675 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
FAAP20-214ENST00000497675 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
FAAP20-214ENST00000497675 CENPBP07199 599 aaPredicted RBP20.89■□□□□ 0.93
FAAP20-214ENST00000497675 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
FAAP20-214ENST00000497675 ARID4BQ4LE39 1312 aaPredicted RBP20.87■□□□□ 0.93
FAAP20-214ENST00000497675 NEFLP07196 543 aa20.82■□□□□ 0.92
FAAP20-214ENST00000497675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.81■□□□□ 0.92
FAAP20-214ENST00000497675 EEA1Q15075 1411 aa20.77■□□□□ 0.92
FAAP20-214ENST00000497675 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
FAAP20-214ENST00000497675 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
FAAP20-214ENST00000497675 CUX2O14529 1486 aa20.67■□□□□ 0.9
FAAP20-214ENST00000497675 MROH2BQ7Z745 1585 aa20.66■□□□□ 0.9
FAAP20-214ENST00000497675 CLIP1P30622 1438 aa20.64■□□□□ 0.9
FAAP20-214ENST00000497675 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
FAAP20-214ENST00000497675 SOGA1O94964 1423 aa20.63■□□□□ 0.89
FAAP20-214ENST00000497675 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
FAAP20-214ENST00000497675 CFDP1Q9UEE9 299 aaPredicted RBP20.62■□□□□ 0.89
FAAP20-214ENST00000497675 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
FAAP20-214ENST00000497675 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
FAAP20-214ENST00000497675 PPP1R15AO75807 674 aaPredicted RBP20.6■□□□□ 0.89
FAAP20-214ENST00000497675 NEFMP07197 916 aa20.6■□□□□ 0.89
FAAP20-214ENST00000497675 CARMIL2Q6F5E8 1435 aa20.56■□□□□ 0.88
FAAP20-214ENST00000497675 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
FAAP20-214ENST00000497675 SLC24A1O60721 1099 aa20.55■□□□□ 0.88
FAAP20-214ENST00000497675 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
FAAP20-214ENST00000497675 GOLGA3Q08378 1498 aa20.54■□□□□ 0.88
FAAP20-214ENST00000497675 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
FAAP20-214ENST00000497675 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
FAAP20-214ENST00000497675 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
FAAP20-214ENST00000497675 HRCP23327 699 aa20.45■□□□□ 0.86
FAAP20-214ENST00000497675 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
FAAP20-214ENST00000497675 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
FAAP20-214ENST00000497675 TONSLQ96HA7 1378 aa20.41■□□□□ 0.86
FAAP20-214ENST00000497675 MLECQ14165 292 aa20.41■□□□□ 0.86
FAAP20-214ENST00000497675 RRP7BPQ9NSQ0 103 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms