RNA–Protein interactions for RNA: ENST00000497629.1

BBX-226, Transcript of BBX, HMG-box containing, humanhuman

TSL 2

Gene BBX, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-226ENST00000497629 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
BBX-226ENST00000497629 CHIC1Q5VXU3 224 aa27.85■■■□□ 2.05
BBX-226ENST00000497629 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
BBX-226ENST00000497629 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
BBX-226ENST00000497629 FOXD1Q16676 465 aa22.99■■□□□ 1.27
BBX-226ENST00000497629 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
BBX-226ENST00000497629 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
BBX-226ENST00000497629 PIAS4Q8N2W9 510 aaPredicted RBP21.62■■□□□ 1.05
BBX-226ENST00000497629 ADRA2BP18089 450 aa21.61■■□□□ 1.05
BBX-226ENST00000497629 MSH5O43196 834 aa21.57■■□□□ 1.04
BBX-226ENST00000497629 POTEDQ86YR6 584 aa20.48■□□□□ 0.87
BBX-226ENST00000497629 SCAF1Q9H7N4 1312 aaKnown RBP19.98■□□□□ 0.79
BBX-226ENST00000497629 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
BBX-226ENST00000497629 DMRT2Q9Y5R5 561 aa19.69■□□□□ 0.74
BBX-226ENST00000497629 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
BBX-226ENST00000497629 CNKSR2Q8WXI2 1034 aa19.26■□□□□ 0.67
BBX-226ENST00000497629 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
BBX-226ENST00000497629 HOXD11P31277 338 aaPredicted RBP19.06■□□□□ 0.64
BBX-226ENST00000497629 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
BBX-226ENST00000497629 DCAF8L1A6NGE4 600 aa18.88■□□□□ 0.61
BBX-226ENST00000497629 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
BBX-226ENST00000497629 KCNA4P22459 653 aa18.5■□□□□ 0.55
BBX-226ENST00000497629 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
BBX-226ENST00000497629 RNF39Q9H2S5 420 aa18.34■□□□□ 0.53
BBX-226ENST00000497629 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
BBX-226ENST00000497629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■■□ 21.3
BBX-226ENST00000497629 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
BBX-226ENST00000497629 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
BBX-226ENST00000497629 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
BBX-226ENST00000497629 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
BBX-226ENST00000497629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
BBX-226ENST00000497629 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
BBX-226ENST00000497629 APLP2Q06481 763 aa17.52■□□□□ 0.4
BBX-226ENST00000497629 CAPN15O75808 1086 aa17.45■□□□□ 0.38
BBX-226ENST00000497629 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
BBX-226ENST00000497629 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
BBX-226ENST00000497629 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
BBX-226ENST00000497629 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
BBX-226ENST00000497629 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
BBX-226ENST00000497629 DSG3P32926 999 aa17.25■□□□□ 0.35
BBX-226ENST00000497629 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
BBX-226ENST00000497629 ABCB7O75027 752 aa17.01■□□□□ 0.31
BBX-226ENST00000497629 ZBTB22O15209 634 aa16.95■□□□□ 0.3
BBX-226ENST00000497629 POLA2Q14181 598 aa16.8■□□□□ 0.28
BBX-226ENST00000497629 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.28
BBX-226ENST00000497629 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
BBX-226ENST00000497629 ZBTB12Q9Y330 459 aaPredicted RBP16.63■□□□□ 0.25
BBX-226ENST00000497629 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
BBX-226ENST00000497629 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
BBX-226ENST00000497629 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
BBX-226ENST00000497629 FBLN2P98095 1184 aa16.3■□□□□ 0.2
BBX-226ENST00000497629 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
BBX-226ENST00000497629 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
BBX-226ENST00000497629 POTEHQ6S545 545 aa16.15■□□□□ 0.18
BBX-226ENST00000497629 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
BBX-226ENST00000497629 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
BBX-226ENST00000497629 SPDYE2Q495Y8 402 aa16.07■□□□□ 0.16
BBX-226ENST00000497629 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
BBX-226ENST00000497629 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
BBX-226ENST00000497629 REM2Q8IYK8 340 aaPredicted RBP15.99■□□□□ 0.15
BBX-226ENST00000497629 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
BBX-226ENST00000497629 SSUH2Q9Y2M2 353 aa15.83■□□□□ 0.12
BBX-226ENST00000497629 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
BBX-226ENST00000497629 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
BBX-226ENST00000497629 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
BBX-226ENST00000497629 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
BBX-226ENST00000497629 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
BBX-226ENST00000497629 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
BBX-226ENST00000497629 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
BBX-226ENST00000497629 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
BBX-226ENST00000497629 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
BBX-226ENST00000497629 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
BBX-226ENST00000497629 HAX1O00165 279 aa15.36■□□□□ 0.05
BBX-226ENST00000497629 SP7Q8TDD2 431 aaPredicted RBP15.27■□□□□ 0.04
BBX-226ENST00000497629 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
BBX-226ENST00000497629 PROM2Q8N271 834 aa15.13■□□□□ 0.01
BBX-226ENST00000497629 C19orf67A6NJJ6 358 aa15.12■□□□□ 0.01
BBX-226ENST00000497629 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
BBX-226ENST00000497629 CREBZFQ9NS37 354 aa15.05■□□□□ -0
BBX-226ENST00000497629 EVX2Q03828 476 aa15.04■□□□□ -0
BBX-226ENST00000497629 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
BBX-226ENST00000497629 FKBP8Q14318 412 aa14.96□□□□□ -0.01
BBX-226ENST00000497629 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
BBX-226ENST00000497629 PLEKHG5O94827 1062 aa14.88□□□□□ -0.03
BBX-226ENST00000497629 CLCN6P51797 869 aa14.86□□□□□ -0.03
BBX-226ENST00000497629 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
BBX-226ENST00000497629 GABBR2O75899 941 aa14.82□□□□□ -0.04
BBX-226ENST00000497629 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
BBX-226ENST00000497629 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
BBX-226ENST00000497629 MIER1Q8N108 512 aa14.77□□□□□ -0.05
BBX-226ENST00000497629 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
BBX-226ENST00000497629 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.05
BBX-226ENST00000497629 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
BBX-226ENST00000497629 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
BBX-226ENST00000497629 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
BBX-226ENST00000497629 PHF12Q96QT6 1004 aa14.55□□□□□ -0.08
BBX-226ENST00000497629 TSPYL2Q9H2G4 693 aaPredicted RBP14.55□□□□□ -0.08
BBX-226ENST00000497629 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
BBX-226ENST00000497629 CCDC61Q9Y6R9 512 aa14.46□□□□□ -0.09
BBX-226ENST00000497629 RASEFQ8IZ41 740 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms