RNA–Protein interactions for RNA: ENST00000496259.5

KRBA1-207, Transcript of KRAB-A domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRBA1, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-207ENST00000496259 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
KRBA1-207ENST00000496259 SHROOM4Q9ULL8 1493 aa19.72■□□□□ 0.75
KRBA1-207ENST00000496259 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
KRBA1-207ENST00000496259 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
KRBA1-207ENST00000496259 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
KRBA1-207ENST00000496259 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
KRBA1-207ENST00000496259 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
KRBA1-207ENST00000496259 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
KRBA1-207ENST00000496259 HRCP23327 699 aa18.35■□□□□ 0.53
KRBA1-207ENST00000496259 CCDC180Q9P1Z9 1646 aa18.35■□□□□ 0.53
KRBA1-207ENST00000496259 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.52
KRBA1-207ENST00000496259 PPARGC1BQ86YN6 1023 aaKnown RBP18.23■□□□□ 0.51
KRBA1-207ENST00000496259 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
KRBA1-207ENST00000496259 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
KRBA1-207ENST00000496259 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
KRBA1-207ENST00000496259 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
KRBA1-207ENST00000496259 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
KRBA1-207ENST00000496259 SCRIBQ14160 1630 aa17.77■□□□□ 0.43
KRBA1-207ENST00000496259 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
KRBA1-207ENST00000496259 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.42
KRBA1-207ENST00000496259 ABCC9O60706 1549 aa17.61■□□□□ 0.41
KRBA1-207ENST00000496259 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
KRBA1-207ENST00000496259 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
KRBA1-207ENST00000496259 PELP1Q8IZL8 1130 aaKnown RBP17.45■□□□□ 0.38
KRBA1-207ENST00000496259 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
KRBA1-207ENST00000496259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.38
KRBA1-207ENST00000496259 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
KRBA1-207ENST00000496259 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.36
KRBA1-207ENST00000496259 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
KRBA1-207ENST00000496259 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
KRBA1-207ENST00000496259 WIZO95785 1651 aa17.16■□□□□ 0.34
KRBA1-207ENST00000496259 NACADO15069 1562 aa17.12■□□□□ 0.33
KRBA1-207ENST00000496259 PABPN1Q86U42 306 aaKnown RBP eCLIP17.12■□□□□ 0.33
KRBA1-207ENST00000496259 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
KRBA1-207ENST00000496259 ABCC8Q09428 1581 aa17.01■□□□□ 0.31
KRBA1-207ENST00000496259 DIEXFQ68CQ4 756 aaKnown RBP17■□□□□ 0.31
KRBA1-207ENST00000496259 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
KRBA1-207ENST00000496259 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
KRBA1-207ENST00000496259 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
KRBA1-207ENST00000496259 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.3
KRBA1-207ENST00000496259 MYT1Q01538 1121 aa16.94■□□□□ 0.3
KRBA1-207ENST00000496259 SOGA1O94964 1423 aa16.94■□□□□ 0.3
KRBA1-207ENST00000496259 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
KRBA1-207ENST00000496259 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
KRBA1-207ENST00000496259 APLP2Q06481 763 aa16.92■□□□□ 0.3
KRBA1-207ENST00000496259 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
KRBA1-207ENST00000496259 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
KRBA1-207ENST00000496259 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
KRBA1-207ENST00000496259 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
KRBA1-207ENST00000496259 RUSC2Q8N2Y8 1516 aa16.81■□□□□ 0.28
KRBA1-207ENST00000496259 TOP2AP11388 1531 aaKnown RBP16.78■□□□□ 0.28
KRBA1-207ENST00000496259 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
KRBA1-207ENST00000496259 ZNF316A6NFI3 1004 aaPredicted RBP16.73■□□□□ 0.27
KRBA1-207ENST00000496259 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
KRBA1-207ENST00000496259 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
KRBA1-207ENST00000496259 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
KRBA1-207ENST00000496259 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
KRBA1-207ENST00000496259 EEA1Q15075 1411 aa16.63■□□□□ 0.25
KRBA1-207ENST00000496259 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
KRBA1-207ENST00000496259 CLIP1P30622 1438 aa16.62■□□□□ 0.25
KRBA1-207ENST00000496259 ITGAEP38570 1179 aa16.62■□□□□ 0.25
KRBA1-207ENST00000496259 MIER1Q8N108 512 aa16.59■□□□□ 0.25
KRBA1-207ENST00000496259 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
KRBA1-207ENST00000496259 UNC13AQ9UPW8 1703 aa16.52■□□□□ 0.24
KRBA1-207ENST00000496259 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
KRBA1-207ENST00000496259 ATP1B4Q9UN42 357 aaPredicted RBP16.47■□□□□ 0.23
KRBA1-207ENST00000496259 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.23
KRBA1-207ENST00000496259 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
KRBA1-207ENST00000496259 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
KRBA1-207ENST00000496259 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
KRBA1-207ENST00000496259 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
KRBA1-207ENST00000496259 BICRAQ9NZM4 1560 aa16.33■□□□□ 0.2
KRBA1-207ENST00000496259 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
KRBA1-207ENST00000496259 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
KRBA1-207ENST00000496259 KIF21BO75037 1637 aa16.26■□□□□ 0.19
KRBA1-207ENST00000496259 DHX57Q6P158 1386 aaKnown RBP16.19■□□□□ 0.18
KRBA1-207ENST00000496259 KIF27Q86VH2 1401 aa16.18■□□□□ 0.18
KRBA1-207ENST00000496259 BCANQ96GW7 911 aa16.15■□□□□ 0.18
KRBA1-207ENST00000496259 HIRIP3Q9BW71 556 aaPredicted RBP16.14■□□□□ 0.17
KRBA1-207ENST00000496259 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
KRBA1-207ENST00000496259 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
KRBA1-207ENST00000496259 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
KRBA1-207ENST00000496259 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
KRBA1-207ENST00000496259 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
KRBA1-207ENST00000496259 SIN3AQ96ST3 1273 aa16.09■□□□□ 0.17
KRBA1-207ENST00000496259 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
KRBA1-207ENST00000496259 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
KRBA1-207ENST00000496259 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
KRBA1-207ENST00000496259 CUX2O14529 1486 aa16.07■□□□□ 0.16
KRBA1-207ENST00000496259 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
KRBA1-207ENST00000496259 RAB3GAP2Q9H2M9 1393 aa16.04■□□□□ 0.16
KRBA1-207ENST00000496259 CUX1P39880 1505 aa16.03■□□□□ 0.16
KRBA1-207ENST00000496259 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
KRBA1-207ENST00000496259 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
KRBA1-207ENST00000496259 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
KRBA1-207ENST00000496259 TRIM52Q96A61 297 aa15.95■□□□□ 0.14
KRBA1-207ENST00000496259 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
KRBA1-207ENST00000496259 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
KRBA1-207ENST00000496259 NEFLP07196 543 aa15.94■□□□□ 0.14
KRBA1-207ENST00000496259 IGF1RP08069 1367 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms