RNA–Protein interactions for RNA: ENST00000495559.1

NPAS2-212, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 2

Gene NPAS2, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-212ENST00000495559 NISCHQ9Y2I1 1504 aa13.47□□□□□ -0.25
NPAS2-212ENST00000495559 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
NPAS2-212ENST00000495559 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
NPAS2-212ENST00000495559 MYT1Q01538 1121 aa13.09□□□□□ -0.31
NPAS2-212ENST00000495559 HRCP23327 699 aa13.07□□□□□ -0.32
NPAS2-212ENST00000495559 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
NPAS2-212ENST00000495559 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
NPAS2-212ENST00000495559 SHROOM4Q9ULL8 1493 aa12.6□□□□□ -0.39
NPAS2-212ENST00000495559 CENPBP07199 599 aaPredicted RBP12.6□□□□□ -0.39
NPAS2-212ENST00000495559 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
NPAS2-212ENST00000495559 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
NPAS2-212ENST00000495559 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
NPAS2-212ENST00000495559 GTF3C3Q9Y5Q9 886 aa12.46□□□□□ -0.42
NPAS2-212ENST00000495559 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
NPAS2-212ENST00000495559 DCAF8L2P0C7V8 631 aa12.34□□□□□ -0.43
NPAS2-212ENST00000495559 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
NPAS2-212ENST00000495559 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
NPAS2-212ENST00000495559 CCER1Q8TC90 406 aaPredicted RBP12.26□□□□□ -0.45
NPAS2-212ENST00000495559 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
NPAS2-212ENST00000495559 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
NPAS2-212ENST00000495559 TTBK1Q5TCY1 1321 aaPredicted RBP12.19□□□□□ -0.46
NPAS2-212ENST00000495559 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
NPAS2-212ENST00000495559 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
NPAS2-212ENST00000495559 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
NPAS2-212ENST00000495559 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
NPAS2-212ENST00000495559 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
NPAS2-212ENST00000495559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
NPAS2-212ENST00000495559 BCANQ96GW7 911 aa11.89□□□□□ -0.51
NPAS2-212ENST00000495559 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
NPAS2-212ENST00000495559 NEFLP07196 543 aa11.81□□□□□ -0.52
NPAS2-212ENST00000495559 ABCC9O60706 1549 aa11.79□□□□□ -0.52
NPAS2-212ENST00000495559 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
NPAS2-212ENST00000495559 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
NPAS2-212ENST00000495559 MYO15BQ96JP2 1530 aa11.72□□□□□ -0.53
NPAS2-212ENST00000495559 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.54
NPAS2-212ENST00000495559 ZNF316A6NFI3 1004 aaPredicted RBP11.68□□□□□ -0.54
NPAS2-212ENST00000495559 MIER1Q8N108 512 aa11.63□□□□□ -0.55
NPAS2-212ENST00000495559 EIF5BO60841 1220 aaKnown RBP11.61□□□□□ -0.55
NPAS2-212ENST00000495559 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
NPAS2-212ENST00000495559 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
NPAS2-212ENST00000495559 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
NPAS2-212ENST00000495559 RTL5Q5HYW3 569 aaPredicted RBP11.54□□□□□ -0.56
NPAS2-212ENST00000495559 FKBP8Q14318 412 aa11.54□□□□□ -0.56
NPAS2-212ENST00000495559 APLP2Q06481 763 aa11.52□□□□□ -0.56
NPAS2-212ENST00000495559 ITGAEP38570 1179 aa11.5□□□□□ -0.57
NPAS2-212ENST00000495559 SUPT16HQ9Y5B9 1047 aaKnown RBP11.5□□□□□ -0.57
NPAS2-212ENST00000495559 NBR1Q14596 966 aa11.49□□□□□ -0.57
NPAS2-212ENST00000495559 RANGAP1P46060 587 aaPredicted RBP11.49□□□□□ -0.57
NPAS2-212ENST00000495559 TSHZ2Q9NRE2 1034 aa11.49□□□□□ -0.57
NPAS2-212ENST00000495559 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
NPAS2-212ENST00000495559 CDK11AQ9UQ88 783 aaPredicted RBP11.44□□□□□ -0.58
NPAS2-212ENST00000495559 CCDC136Q96JN2 1154 aa11.42□□□□□ -0.58
NPAS2-212ENST00000495559 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
NPAS2-212ENST00000495559 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
NPAS2-212ENST00000495559 CLSPNQ9HAW4 1339 aa11.37□□□□□ -0.59
NPAS2-212ENST00000495559 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
NPAS2-212ENST00000495559 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
NPAS2-212ENST00000495559 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
NPAS2-212ENST00000495559 DEKP35659 375 aaKnown RBP11.35□□□□□ -0.59
NPAS2-212ENST00000495559 MYT1LQ9UL68 1186 aa11.29□□□□□ -0.6
NPAS2-212ENST00000495559 IRX6P78412 446 aaPredicted RBP11.28□□□□□ -0.6
NPAS2-212ENST00000495559 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
NPAS2-212ENST00000495559 PABPN1Q86U42 306 aaKnown RBP eCLIP11.26□□□□□ -0.611e-8■■■□□ 17.2
NPAS2-212ENST00000495559 CNGB1Q14028 1251 aaPredicted RBP11.24□□□□□ -0.61
NPAS2-212ENST00000495559 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
NPAS2-212ENST00000495559 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.61
NPAS2-212ENST00000495559 SALL2Q9Y467 1007 aaPredicted RBP11.19□□□□□ -0.62
NPAS2-212ENST00000495559 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
NPAS2-212ENST00000495559 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
NPAS2-212ENST00000495559 GLIPR1L2Q4G1C9 344 aa11.16□□□□□ -0.62
NPAS2-212ENST00000495559 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
NPAS2-212ENST00000495559 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
NPAS2-212ENST00000495559 ANP32CO43423 234 aa11.12□□□□□ -0.63
NPAS2-212ENST00000495559 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
NPAS2-212ENST00000495559 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
NPAS2-212ENST00000495559 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
NPAS2-212ENST00000495559 SCRIBQ14160 1630 aa11.04□□□□□ -0.64
NPAS2-212ENST00000495559 HIRIP3Q9BW71 556 aaPredicted RBP11.04□□□□□ -0.64
NPAS2-212ENST00000495559 KCNH8Q96L42 1107 aa11.03□□□□□ -0.64
NPAS2-212ENST00000495559 NACADO15069 1562 aa11.03□□□□□ -0.64
NPAS2-212ENST00000495559 LAS1LQ9Y4W2 734 aaKnown RBP11.03□□□□□ -0.64
NPAS2-212ENST00000495559 ARXQ96QS3 562 aa11.01□□□□□ -0.65
NPAS2-212ENST00000495559 NEFMP07197 916 aa11.01□□□□□ -0.65
NPAS2-212ENST00000495559 IL27Q8NEV9 243 aa11.01□□□□□ -0.65
NPAS2-212ENST00000495559 POLR3GLQ9BT43 218 aa11.01□□□□□ -0.65
NPAS2-212ENST00000495559 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
NPAS2-212ENST00000495559 ATP1B4Q9UN42 357 aaPredicted RBP10.99□□□□□ -0.65
NPAS2-212ENST00000495559 TIMELESSQ9UNS1 1208 aa10.99□□□□□ -0.65
NPAS2-212ENST00000495559 MSH5O43196 834 aa10.98□□□□□ -0.65
NPAS2-212ENST00000495559 B4GALNT3Q6L9W6 998 aa10.98□□□□□ -0.65
NPAS2-212ENST00000495559 PKNOX2Q96KN3 472 aa10.95□□□□□ -0.66
NPAS2-212ENST00000495559 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
NPAS2-212ENST00000495559 FAM9BQ8IZU0 186 aa10.92□□□□□ -0.66
NPAS2-212ENST00000495559 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
NPAS2-212ENST00000495559 FANCIQ9NVI1 1328 aa10.89□□□□□ -0.67
NPAS2-212ENST00000495559 ARID4BQ4LE39 1312 aaPredicted RBP10.88□□□□□ -0.67
NPAS2-212ENST00000495559 UBE2Q2Q8WVN8 375 aa10.87□□□□□ -0.67
NPAS2-212ENST00000495559 NAP1L5Q96NT1 182 aaPredicted RBP10.87□□□□□ -0.67
NPAS2-212ENST00000495559 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
NPAS2-212ENST00000495559 PODXL2Q9NZ53 605 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms