RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
CCNL1-225ENST00000495471 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
CCNL1-225ENST00000495471 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
CCNL1-225ENST00000495471 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
CCNL1-225ENST00000495471 FOXD1Q16676 465 aa20.3■□□□□ 0.84
CCNL1-225ENST00000495471 PLPPR3Q6T4P5 718 aa19.9■□□□□ 0.78
CCNL1-225ENST00000495471 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
CCNL1-225ENST00000495471 ADRA2BP18089 450 aa19.25■□□□□ 0.67
CCNL1-225ENST00000495471 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
CCNL1-225ENST00000495471 MSH5O43196 834 aa18.81■□□□□ 0.6
CCNL1-225ENST00000495471 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
CCNL1-225ENST00000495471 MAPK8IP2Q13387 824 aaPredicted RBP17.57■□□□□ 0.4
CCNL1-225ENST00000495471 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
CCNL1-225ENST00000495471 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
CCNL1-225ENST00000495471 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
CCNL1-225ENST00000495471 CNKSR2Q8WXI2 1034 aa17.08■□□□□ 0.32
CCNL1-225ENST00000495471 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
CCNL1-225ENST00000495471 HOXD11P31277 338 aaPredicted RBP16.86■□□□□ 0.29
CCNL1-225ENST00000495471 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
CCNL1-225ENST00000495471 KCNA4P22459 653 aa16.76■□□□□ 0.27
CCNL1-225ENST00000495471 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
CCNL1-225ENST00000495471 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
CCNL1-225ENST00000495471 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
CCNL1-225ENST00000495471 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
CCNL1-225ENST00000495471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.162e-9■■■□□ 15.3
CCNL1-225ENST00000495471 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
CCNL1-225ENST00000495471 SLC4A2P04920 1241 aa15.89■□□□□ 0.13
CCNL1-225ENST00000495471 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
CCNL1-225ENST00000495471 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
CCNL1-225ENST00000495471 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
CCNL1-225ENST00000495471 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
CCNL1-225ENST00000495471 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
CCNL1-225ENST00000495471 MYCNP04198 464 aaPredicted RBP15.44■□□□□ 0.06
CCNL1-225ENST00000495471 ZBTB22O15209 634 aa15.43■□□□□ 0.06
CCNL1-225ENST00000495471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
CCNL1-225ENST00000495471 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
CCNL1-225ENST00000495471 CAPN15O75808 1086 aa15.39■□□□□ 0.05
CCNL1-225ENST00000495471 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
CCNL1-225ENST00000495471 APLP2Q06481 763 aa15.32■□□□□ 0.04
CCNL1-225ENST00000495471 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
CCNL1-225ENST00000495471 DSG3P32926 999 aa15.22■□□□□ 0.03
CCNL1-225ENST00000495471 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
CCNL1-225ENST00000495471 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
CCNL1-225ENST00000495471 ABCB7O75027 752 aa15.09■□□□□ 0.01
CCNL1-225ENST00000495471 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
CCNL1-225ENST00000495471 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
CCNL1-225ENST00000495471 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
CCNL1-225ENST00000495471 POLA2Q14181 598 aa14.91□□□□□ -0.02
CCNL1-225ENST00000495471 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
CCNL1-225ENST00000495471 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
CCNL1-225ENST00000495471 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
CCNL1-225ENST00000495471 FBLN2P98095 1184 aa14.43□□□□□ -0.1
CCNL1-225ENST00000495471 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
CCNL1-225ENST00000495471 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
CCNL1-225ENST00000495471 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
CCNL1-225ENST00000495471 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
CCNL1-225ENST00000495471 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
CCNL1-225ENST00000495471 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
CCNL1-225ENST00000495471 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
CCNL1-225ENST00000495471 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
CCNL1-225ENST00000495471 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
CCNL1-225ENST00000495471 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
CCNL1-225ENST00000495471 POTEHQ6S545 545 aa13.97□□□□□ -0.17
CCNL1-225ENST00000495471 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCNL1-225ENST00000495471 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CCNL1-225ENST00000495471 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
CCNL1-225ENST00000495471 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
CCNL1-225ENST00000495471 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
CCNL1-225ENST00000495471 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCNL1-225ENST00000495471 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
CCNL1-225ENST00000495471 PROM2Q8N271 834 aa13.64□□□□□ -0.23
CCNL1-225ENST00000495471 FKBP8Q14318 412 aa13.62□□□□□ -0.23
CCNL1-225ENST00000495471 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
CCNL1-225ENST00000495471 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
CCNL1-225ENST00000495471 CHADLQ6NUI6 762 aa13.56□□□□□ -0.24
CCNL1-225ENST00000495471 HAX1O00165 279 aa13.43□□□□□ -0.26
CCNL1-225ENST00000495471 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
CCNL1-225ENST00000495471 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
CCNL1-225ENST00000495471 EVX2Q03828 476 aa13.33□□□□□ -0.28
CCNL1-225ENST00000495471 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
CCNL1-225ENST00000495471 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.29
CCNL1-225ENST00000495471 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
CCNL1-225ENST00000495471 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
CCNL1-225ENST00000495471 MIER1Q8N108 512 aa13.2□□□□□ -0.3
CCNL1-225ENST00000495471 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
CCNL1-225ENST00000495471 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
CCNL1-225ENST00000495471 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCNL1-225ENST00000495471 PLEKHG5O94827 1062 aa13.12□□□□□ -0.31
CCNL1-225ENST00000495471 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
CCNL1-225ENST00000495471 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
CCNL1-225ENST00000495471 GABBR2O75899 941 aa13.02□□□□□ -0.33
CCNL1-225ENST00000495471 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
CCNL1-225ENST00000495471 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
CCNL1-225ENST00000495471 ZBTB47Q9UFB7 747 aaPredicted RBP12.99□□□□□ -0.33
CCNL1-225ENST00000495471 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
CCNL1-225ENST00000495471 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
CCNL1-225ENST00000495471 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
CCNL1-225ENST00000495471 NUBP1P53384 320 aa12.93□□□□□ -0.34
CCNL1-225ENST00000495471 CLCN6P51797 869 aa12.89□□□□□ -0.35
CCNL1-225ENST00000495471 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms