RNA–Protein interactions for RNA: ENST00000494843.5

ACTL6A-214, Transcript of actin like 6A, humanhuman

TSL 2

Gene ACTL6A, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-214ENST00000494843 AEBP2Q6ZN18 517 aaPredicted RBP19.48■□□□□ 0.71
ACTL6A-214ENST00000494843 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
ACTL6A-214ENST00000494843 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
ACTL6A-214ENST00000494843 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
ACTL6A-214ENST00000494843 FOXD1Q16676 465 aa15.45■□□□□ 0.06
ACTL6A-214ENST00000494843 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
ACTL6A-214ENST00000494843 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
ACTL6A-214ENST00000494843 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
ACTL6A-214ENST00000494843 ADRA2BP18089 450 aa14.53□□□□□ -0.08
ACTL6A-214ENST00000494843 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
ACTL6A-214ENST00000494843 MSH5O43196 834 aa14.38□□□□□ -0.11
ACTL6A-214ENST00000494843 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
ACTL6A-214ENST00000494843 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
ACTL6A-214ENST00000494843 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
ACTL6A-214ENST00000494843 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
ACTL6A-214ENST00000494843 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
ACTL6A-214ENST00000494843 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
ACTL6A-214ENST00000494843 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
ACTL6A-214ENST00000494843 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
ACTL6A-214ENST00000494843 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
ACTL6A-214ENST00000494843 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
ACTL6A-214ENST00000494843 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
ACTL6A-214ENST00000494843 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
ACTL6A-214ENST00000494843 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
ACTL6A-214ENST00000494843 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
ACTL6A-214ENST00000494843 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
ACTL6A-214ENST00000494843 KCNA4P22459 653 aa12.31□□□□□ -0.44
ACTL6A-214ENST00000494843 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
ACTL6A-214ENST00000494843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
ACTL6A-214ENST00000494843 SHROOM4Q9ULL8 1493 aa12.15□□□□□ -0.46
ACTL6A-214ENST00000494843 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
ACTL6A-214ENST00000494843 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
ACTL6A-214ENST00000494843 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
ACTL6A-214ENST00000494843 ABCC9O60706 1549 aa11.9□□□□□ -0.5
ACTL6A-214ENST00000494843 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
ACTL6A-214ENST00000494843 NACADO15069 1562 aa11.86□□□□□ -0.51
ACTL6A-214ENST00000494843 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
ACTL6A-214ENST00000494843 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
ACTL6A-214ENST00000494843 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
ACTL6A-214ENST00000494843 SUPT5HO00267 1087 aaKnown RBP11.77□□□□□ -0.53
ACTL6A-214ENST00000494843 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
ACTL6A-214ENST00000494843 SPINK5Q9NQ38 1064 aaPredicted RBP11.72□□□□□ -0.53
ACTL6A-214ENST00000494843 CAPN15O75808 1086 aa11.71□□□□□ -0.53
ACTL6A-214ENST00000494843 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
ACTL6A-214ENST00000494843 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
ACTL6A-214ENST00000494843 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
ACTL6A-214ENST00000494843 DSG3P32926 999 aa11.56□□□□□ -0.56
ACTL6A-214ENST00000494843 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
ACTL6A-214ENST00000494843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
ACTL6A-214ENST00000494843 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
ACTL6A-214ENST00000494843 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
ACTL6A-214ENST00000494843 APLP2Q06481 763 aa11.53□□□□□ -0.56
ACTL6A-214ENST00000494843 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
ACTL6A-214ENST00000494843 BAZ1AQ9NRL2 1556 aaPredicted RBP11.48□□□□□ -0.57
ACTL6A-214ENST00000494843 ABCB7O75027 752 aa11.47□□□□□ -0.57
ACTL6A-214ENST00000494843 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
ACTL6A-214ENST00000494843 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
ACTL6A-214ENST00000494843 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
ACTL6A-214ENST00000494843 WIZO95785 1651 aa11.44□□□□□ -0.58
ACTL6A-214ENST00000494843 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
ACTL6A-214ENST00000494843 FOXD4L1Q9NU39 408 aa11.43□□□□□ -0.58
ACTL6A-214ENST00000494843 SMARCA4P51532 1647 aa11.4□□□□□ -0.58
ACTL6A-214ENST00000494843 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
ACTL6A-214ENST00000494843 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
ACTL6A-214ENST00000494843 TOP2AP11388 1531 aaKnown RBP11.32□□□□□ -0.6
ACTL6A-214ENST00000494843 ZBTB22O15209 634 aa11.32□□□□□ -0.6
ACTL6A-214ENST00000494843 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
ACTL6A-214ENST00000494843 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
ACTL6A-214ENST00000494843 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
ACTL6A-214ENST00000494843 POLA2Q14181 598 aa11.23□□□□□ -0.61
ACTL6A-214ENST00000494843 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
ACTL6A-214ENST00000494843 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
ACTL6A-214ENST00000494843 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
ACTL6A-214ENST00000494843 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
ACTL6A-214ENST00000494843 ATAD2BQ9ULI0 1458 aa11.03□□□□□ -0.64
ACTL6A-214ENST00000494843 LOC105371045A0A1W2PR82 267 aa11.01□□□□□ -0.65
ACTL6A-214ENST00000494843 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
ACTL6A-214ENST00000494843 RBM42Q9BTD8 480 aaKnown RBP11□□□□□ -0.65
ACTL6A-214ENST00000494843 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
ACTL6A-214ENST00000494843 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
ACTL6A-214ENST00000494843 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
ACTL6A-214ENST00000494843 PRDM2Q13029 1718 aa10.97□□□□□ -0.65
ACTL6A-214ENST00000494843 ZBTB12Q9Y330 459 aaPredicted RBP10.96□□□□□ -0.65
ACTL6A-214ENST00000494843 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
ACTL6A-214ENST00000494843 SYNJ1O43426 1573 aa10.92□□□□□ -0.66
ACTL6A-214ENST00000494843 EEA1Q15075 1411 aa10.92□□□□□ -0.66
ACTL6A-214ENST00000494843 BIVM-ERCC5R4GMW8 1640 aa10.91□□□□□ -0.66
ACTL6A-214ENST00000494843 POTEHQ6S545 545 aa10.91□□□□□ -0.66
ACTL6A-214ENST00000494843 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
ACTL6A-214ENST00000494843 NCAPD3P42695 1498 aa10.87□□□□□ -0.67
ACTL6A-214ENST00000494843 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.67
ACTL6A-214ENST00000494843 KIF21BO75037 1637 aa10.87□□□□□ -0.67
ACTL6A-214ENST00000494843 HRCP23327 699 aa10.86□□□□□ -0.67
ACTL6A-214ENST00000494843 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
ACTL6A-214ENST00000494843 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
ACTL6A-214ENST00000494843 PCGF6Q9BYE7 350 aa10.84□□□□□ -0.67
ACTL6A-214ENST00000494843 SOGA1O94964 1423 aa10.82□□□□□ -0.68
ACTL6A-214ENST00000494843 TRIM26Q12899 539 aaPredicted RBP10.81□□□□□ -0.68
ACTL6A-214ENST00000494843 GOLGA3Q08378 1498 aa10.79□□□□□ -0.68
ACTL6A-214ENST00000494843 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms