RNA–Protein interactions for RNA: ENST00000494738.5

CAPN10-216, Transcript of calpain 10, humanhuman

TSL 2

Gene CAPN10, Length 4,406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-216ENST00000494738 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
CAPN10-216ENST00000494738 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
CAPN10-216ENST00000494738 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
CAPN10-216ENST00000494738 ABCC9O60706 1549 aa20.81■□□□□ 0.92
CAPN10-216ENST00000494738 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
CAPN10-216ENST00000494738 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
CAPN10-216ENST00000494738 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
CAPN10-216ENST00000494738 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
CAPN10-216ENST00000494738 RANGAP1P46060 587 aaPredicted RBP19.35■□□□□ 0.69
CAPN10-216ENST00000494738 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
CAPN10-216ENST00000494738 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
CAPN10-216ENST00000494738 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
CAPN10-216ENST00000494738 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
CAPN10-216ENST00000494738 RB1CC1Q8TDY2 1594 aa19.12■□□□□ 0.65
CAPN10-216ENST00000494738 FBLN2P98095 1184 aa19.11■□□□□ 0.65
CAPN10-216ENST00000494738 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
CAPN10-216ENST00000494738 APLP2Q06481 763 aa18.97■□□□□ 0.63
CAPN10-216ENST00000494738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
CAPN10-216ENST00000494738 UBTFP17480 764 aaKnown RBP18.88■□□□□ 0.61
CAPN10-216ENST00000494738 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
CAPN10-216ENST00000494738 NACADO15069 1562 aa18.81■□□□□ 0.6
CAPN10-216ENST00000494738 MYT1LQ9UL68 1186 aa18.78■□□□□ 0.6
CAPN10-216ENST00000494738 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
CAPN10-216ENST00000494738 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
CAPN10-216ENST00000494738 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
CAPN10-216ENST00000494738 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
CAPN10-216ENST00000494738 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
CAPN10-216ENST00000494738 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
CAPN10-216ENST00000494738 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
CAPN10-216ENST00000494738 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
CAPN10-216ENST00000494738 ARID3CA6NKF2 412 aa18.32■□□□□ 0.52
CAPN10-216ENST00000494738 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
CAPN10-216ENST00000494738 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
CAPN10-216ENST00000494738 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.51
CAPN10-216ENST00000494738 P3H3Q8IVL6 736 aa18.2■□□□□ 0.5
CAPN10-216ENST00000494738 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
CAPN10-216ENST00000494738 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.49
CAPN10-216ENST00000494738 ITGAEP38570 1179 aa18.07■□□□□ 0.48
CAPN10-216ENST00000494738 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
CAPN10-216ENST00000494738 HRCP23327 699 aa18■□□□□ 0.47
CAPN10-216ENST00000494738 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
CAPN10-216ENST00000494738 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
CAPN10-216ENST00000494738 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
CAPN10-216ENST00000494738 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
CAPN10-216ENST00000494738 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
CAPN10-216ENST00000494738 MYO15BQ96JP2 1530 aa17.89■□□□□ 0.46
CAPN10-216ENST00000494738 CSRNP3Q8WYN3 585 aa17.87■□□□□ 0.45
CAPN10-216ENST00000494738 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
CAPN10-216ENST00000494738 KCNH8Q96L42 1107 aa17.86■□□□□ 0.45
CAPN10-216ENST00000494738 MYT1Q01538 1121 aa17.83■□□□□ 0.44
CAPN10-216ENST00000494738 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
CAPN10-216ENST00000494738 CYB5RLQ6IPT4 315 aa17.81■□□□□ 0.44
CAPN10-216ENST00000494738 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
CAPN10-216ENST00000494738 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
CAPN10-216ENST00000494738 CADPSQ9ULU8 1353 aa17.78■□□□□ 0.44
CAPN10-216ENST00000494738 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
CAPN10-216ENST00000494738 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
CAPN10-216ENST00000494738 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
CAPN10-216ENST00000494738 BCANQ96GW7 911 aa17.72■□□□□ 0.43
CAPN10-216ENST00000494738 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
CAPN10-216ENST00000494738 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
CAPN10-216ENST00000494738 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
CAPN10-216ENST00000494738 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
CAPN10-216ENST00000494738 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
CAPN10-216ENST00000494738 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
CAPN10-216ENST00000494738 SOGA1O94964 1423 aa17.57■□□□□ 0.4
CAPN10-216ENST00000494738 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
CAPN10-216ENST00000494738 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
CAPN10-216ENST00000494738 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
CAPN10-216ENST00000494738 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
CAPN10-216ENST00000494738 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.4
CAPN10-216ENST00000494738 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.39
CAPN10-216ENST00000494738 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
CAPN10-216ENST00000494738 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
CAPN10-216ENST00000494738 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
CAPN10-216ENST00000494738 CUX2O14529 1486 aa17.49■□□□□ 0.39
CAPN10-216ENST00000494738 KIF27Q86VH2 1401 aa17.48■□□□□ 0.39
CAPN10-216ENST00000494738 NESP48681 1621 aa17.46■□□□□ 0.38
CAPN10-216ENST00000494738 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
CAPN10-216ENST00000494738 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
CAPN10-216ENST00000494738 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
CAPN10-216ENST00000494738 CCER1Q8TC90 406 aaPredicted RBP17.41■□□□□ 0.38
CAPN10-216ENST00000494738 MLECQ14165 292 aa17.41■□□□□ 0.38
CAPN10-216ENST00000494738 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
CAPN10-216ENST00000494738 WIZO95785 1651 aa17.37■□□□□ 0.37
CAPN10-216ENST00000494738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.37■□□□□ 0.37
CAPN10-216ENST00000494738 JPH4Q96JJ6 628 aa17.36■□□□□ 0.37
CAPN10-216ENST00000494738 TSPY4P0CV99 314 aa17.35■□□□□ 0.37
CAPN10-216ENST00000494738 TSPY10P0CW01 314 aa17.35■□□□□ 0.37
CAPN10-216ENST00000494738 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
CAPN10-216ENST00000494738 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.37
CAPN10-216ENST00000494738 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
CAPN10-216ENST00000494738 SENP3Q9H4L4 574 aaPredicted RBP17.31■□□□□ 0.36
CAPN10-216ENST00000494738 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
CAPN10-216ENST00000494738 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.35
CAPN10-216ENST00000494738 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
CAPN10-216ENST00000494738 CARMIL2Q6F5E8 1435 aa17.26■□□□□ 0.35
CAPN10-216ENST00000494738 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
CAPN10-216ENST00000494738 AQRO60306 1485 aaKnown RBP eCLIP17.23■□□□□ 0.355e-8■■■■■ 30.3
CAPN10-216ENST00000494738 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms