RNA–Protein interactions for RNA: ENST00000494502.6

PDCD10-217, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-217ENST00000494502 AEBP2Q6ZN18 517 aaPredicted RBP34.39■■■■□ 3.1
PDCD10-217ENST00000494502 CHIC1Q5VXU3 224 aa33.96■■■■□ 3.03
PDCD10-217ENST00000494502 PHF23Q9BUL5 403 aaPredicted RBP29.94■■■□□ 2.38
PDCD10-217ENST00000494502 SENP3Q9H4L4 574 aaPredicted RBP29.08■■■□□ 2.25
PDCD10-217ENST00000494502 PLPPR3Q6T4P5 718 aa27.73■■■□□ 2.03
PDCD10-217ENST00000494502 FOXD1Q16676 465 aa26.95■■□□□ 1.9
PDCD10-217ENST00000494502 PPP6R1Q9UPN7 881 aa26.26■■□□□ 1.79
PDCD10-217ENST00000494502 ADRA2BP18089 450 aa26.23■■□□□ 1.79
PDCD10-217ENST00000494502 PIAS4Q8N2W9 510 aaPredicted RBP25.49■■□□□ 1.67
PDCD10-217ENST00000494502 MSH5O43196 834 aa24.68■■□□□ 1.54
PDCD10-217ENST00000494502 PPP4R3CPQ6ZMV5 832 aa24.49■■□□□ 1.51
PDCD10-217ENST00000494502 KCNA4P22459 653 aa24.39■■□□□ 1.49
PDCD10-217ENST00000494502 SCAF1Q9H7N4 1312 aaKnown RBP23.96■■□□□ 1.43
PDCD10-217ENST00000494502 NCBP3Q53F19 620 aaKnown RBP23.93■■□□□ 1.42
PDCD10-217ENST00000494502 CNKSR2Q8WXI2 1034 aa23.72■■□□□ 1.39
PDCD10-217ENST00000494502 MAPK8IP2Q13387 824 aaPredicted RBP23.68■■□□□ 1.38
PDCD10-217ENST00000494502 NPM3O75607 178 aaKnown RBP23.63■■□□□ 1.37
PDCD10-217ENST00000494502 DMRT2Q9Y5R5 561 aa23.31■■□□□ 1.32
PDCD10-217ENST00000494502 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
PDCD10-217ENST00000494502 RNF216Q9NWF9 866 aaPredicted RBP23.16■■□□□ 1.3
PDCD10-217ENST00000494502 EHMT2Q96KQ7 1210 aa23.04■■□□□ 1.28
PDCD10-217ENST00000494502 HOXD11P31277 338 aaPredicted RBP22.99■■□□□ 1.27
PDCD10-217ENST00000494502 DNAJC5BQ9UF47 199 aa22.98■■□□□ 1.27
PDCD10-217ENST00000494502 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
PDCD10-217ENST00000494502 CSRNP3Q8WYN3 585 aa22.65■■□□□ 1.22
PDCD10-217ENST00000494502 ZBTB22O15209 634 aa22.49■■□□□ 1.19
PDCD10-217ENST00000494502 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
PDCD10-217ENST00000494502 SLC4A2P04920 1241 aa22.24■■□□□ 1.15
PDCD10-217ENST00000494502 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
PDCD10-217ENST00000494502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.83■■□□□ 1.09
PDCD10-217ENST00000494502 MYCNP04198 464 aaPredicted RBP21.81■■□□□ 1.08
PDCD10-217ENST00000494502 POTEDQ86YR6 584 aa21.78■■□□□ 1.08
PDCD10-217ENST00000494502 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
PDCD10-217ENST00000494502 ATXN8OSP0DMR3 200 aa21.53■■□□□ 1.04
PDCD10-217ENST00000494502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
PDCD10-217ENST00000494502 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
PDCD10-217ENST00000494502 SAMD1Q6SPF0 538 aaPredicted RBP21.36■■□□□ 1.01
PDCD10-217ENST00000494502 RNF39Q9H2S5 420 aa21.22■□□□□ 0.99
PDCD10-217ENST00000494502 ATF5Q9Y2D1 282 aaPredicted RBP21.22■□□□□ 0.99
PDCD10-217ENST00000494502 APLP2Q06481 763 aa21.07■□□□□ 0.96
PDCD10-217ENST00000494502 C1QBPQ07021 282 aaKnown RBP20.96■□□□□ 0.95
PDCD10-217ENST00000494502 SPINK5Q9NQ38 1064 aaPredicted RBP20.84■□□□□ 0.93
PDCD10-217ENST00000494502 ZNF219Q9P2Y4 722 aaPredicted RBP20.83■□□□□ 0.93
PDCD10-217ENST00000494502 ABCC9O60706 1549 aa20.81■□□□□ 0.92
PDCD10-217ENST00000494502 CAPN15O75808 1086 aa20.69■□□□□ 0.9
PDCD10-217ENST00000494502 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
PDCD10-217ENST00000494502 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
PDCD10-217ENST00000494502 POLA2Q14181 598 aa20.47■□□□□ 0.87
PDCD10-217ENST00000494502 FKBP8Q14318 412 aa20.4■□□□□ 0.86
PDCD10-217ENST00000494502 ABCB7O75027 752 aa20.35■□□□□ 0.85
PDCD10-217ENST00000494502 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
PDCD10-217ENST00000494502 DSG3P32926 999 aa20.32■□□□□ 0.84
PDCD10-217ENST00000494502 CACNB1Q02641 598 aaPredicted RBP20.29■□□□□ 0.84
PDCD10-217ENST00000494502 FBLN2P98095 1184 aa20.24■□□□□ 0.83
PDCD10-217ENST00000494502 ZBTB12Q9Y330 459 aaPredicted RBP20.18■□□□□ 0.82
PDCD10-217ENST00000494502 SPDYE4A6NLX3 237 aa20.02■□□□□ 0.8
PDCD10-217ENST00000494502 PROM2Q8N271 834 aa19.84■□□□□ 0.77
PDCD10-217ENST00000494502 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
PDCD10-217ENST00000494502 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
PDCD10-217ENST00000494502 SPDYE2BA6NHP3 402 aa19.68■□□□□ 0.74
PDCD10-217ENST00000494502 SPDYE6P0CI01 402 aa19.68■□□□□ 0.74
PDCD10-217ENST00000494502 SPDYE2Q495Y8 402 aa19.68■□□□□ 0.74
PDCD10-217ENST00000494502 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
PDCD10-217ENST00000494502 SSUH2Q9Y2M2 353 aa19.61■□□□□ 0.73
PDCD10-217ENST00000494502 FBXO3Q9UK99 471 aa19.57■□□□□ 0.72
PDCD10-217ENST00000494502 NACADO15069 1562 aa19.49■□□□□ 0.71
PDCD10-217ENST00000494502 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
PDCD10-217ENST00000494502 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
PDCD10-217ENST00000494502 VASPP50552 380 aaPredicted RBP19.33■□□□□ 0.68
PDCD10-217ENST00000494502 AMER1Q5JTC6 1135 aaPredicted RBP19.32■□□□□ 0.68
PDCD10-217ENST00000494502 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
PDCD10-217ENST00000494502 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
PDCD10-217ENST00000494502 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
PDCD10-217ENST00000494502 AKT1S1Q96B36 256 aa19.19■□□□□ 0.66
PDCD10-217ENST00000494502 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
PDCD10-217ENST00000494502 BICRAQ9NZM4 1560 aa19.17■□□□□ 0.66
PDCD10-217ENST00000494502 MYO15BQ96JP2 1530 aa19.14■□□□□ 0.65
PDCD10-217ENST00000494502 IFNLR1Q8IU57 520 aaPredicted RBP19.1■□□□□ 0.65
PDCD10-217ENST00000494502 REM2Q8IYK8 340 aaPredicted RBP19■□□□□ 0.63
PDCD10-217ENST00000494502 SPDYE1Q8NFV5 336 aaPredicted RBP18.98■□□□□ 0.63
PDCD10-217ENST00000494502 PLCD3Q8N3E9 789 aa18.92■□□□□ 0.62
PDCD10-217ENST00000494502 MIER1Q8N108 512 aa18.89■□□□□ 0.61
PDCD10-217ENST00000494502 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
PDCD10-217ENST00000494502 ZCCHC6Q5VYS8 1495 aaKnown RBP18.83■□□□□ 0.6
PDCD10-217ENST00000494502 CC2D2AQ9P2K1 1620 aa18.82■□□□□ 0.6
PDCD10-217ENST00000494502 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
PDCD10-217ENST00000494502 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
PDCD10-217ENST00000494502 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
PDCD10-217ENST00000494502 PITPNM1O00562 1244 aa18.78■□□□□ 0.6
PDCD10-217ENST00000494502 SPOCK2Q92563 424 aa18.78■□□□□ 0.6
PDCD10-217ENST00000494502 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
PDCD10-217ENST00000494502 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
PDCD10-217ENST00000494502 PRR29P0C7W0 189 aa18.74■□□□□ 0.59
PDCD10-217ENST00000494502 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
PDCD10-217ENST00000494502 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
PDCD10-217ENST00000494502 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
PDCD10-217ENST00000494502 CREBZFQ9NS37 354 aa18.66■□□□□ 0.58
PDCD10-217ENST00000494502 PKD2Q13563 968 aa18.63■□□□□ 0.57
PDCD10-217ENST00000494502 MNX1P50219 401 aaPredicted RBP18.54■□□□□ 0.56
PDCD10-217ENST00000494502 NUBP1P53384 320 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms