RNA–Protein interactions for RNA: ENST00000494357.1

ZNF655-224, Transcript of zinc finger protein 655, humanhuman

TSL 2

Gene ZNF655, Length 4,886 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF655-224ENST00000494357 NISCHQ9Y2I1 1504 aa16.02■□□□□ 0.16
ZNF655-224ENST00000494357 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
ZNF655-224ENST00000494357 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
ZNF655-224ENST00000494357 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
ZNF655-224ENST00000494357 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
ZNF655-224ENST00000494357 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
ZNF655-224ENST00000494357 CHIC1Q5VXU3 224 aa13.29□□□□□ -0.28
ZNF655-224ENST00000494357 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
ZNF655-224ENST00000494357 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
ZNF655-224ENST00000494357 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
ZNF655-224ENST00000494357 DCAF1Q9Y4B6 1507 aa13.12□□□□□ -0.31
ZNF655-224ENST00000494357 HRCP23327 699 aa13.09□□□□□ -0.31
ZNF655-224ENST00000494357 TRIM26Q12899 539 aaPredicted RBP13.04□□□□□ -0.32
ZNF655-224ENST00000494357 FAM9AQ8IZU1 332 aaPredicted RBP13.01□□□□□ -0.33
ZNF655-224ENST00000494357 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
ZNF655-224ENST00000494357 APLP2Q06481 763 aa12.9□□□□□ -0.34
ZNF655-224ENST00000494357 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
ZNF655-224ENST00000494357 ABCC9O60706 1549 aa12.84□□□□□ -0.35
ZNF655-224ENST00000494357 SCRIBQ14160 1630 aa12.82□□□□□ -0.36
ZNF655-224ENST00000494357 NACADO15069 1562 aa12.77□□□□□ -0.37
ZNF655-224ENST00000494357 MYO15BQ96JP2 1530 aa12.77□□□□□ -0.37
ZNF655-224ENST00000494357 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
ZNF655-224ENST00000494357 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
ZNF655-224ENST00000494357 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
ZNF655-224ENST00000494357 CENPBP07199 599 aaPredicted RBP12.67□□□□□ -0.38
ZNF655-224ENST00000494357 RB1CC1Q8TDY2 1594 aa12.64□□□□□ -0.39
ZNF655-224ENST00000494357 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
ZNF655-224ENST00000494357 TTBK1Q5TCY1 1321 aaPredicted RBP12.54□□□□□ -0.4
ZNF655-224ENST00000494357 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
ZNF655-224ENST00000494357 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
ZNF655-224ENST00000494357 EEA1Q15075 1411 aa12.46□□□□□ -0.41
ZNF655-224ENST00000494357 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
ZNF655-224ENST00000494357 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
ZNF655-224ENST00000494357 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
ZNF655-224ENST00000494357 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
ZNF655-224ENST00000494357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
ZNF655-224ENST00000494357 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
ZNF655-224ENST00000494357 DIEXFQ68CQ4 756 aaKnown RBP12.31□□□□□ -0.44
ZNF655-224ENST00000494357 MYT1Q01538 1121 aa12.28□□□□□ -0.44
ZNF655-224ENST00000494357 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
ZNF655-224ENST00000494357 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
ZNF655-224ENST00000494357 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
ZNF655-224ENST00000494357 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
ZNF655-224ENST00000494357 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
ZNF655-224ENST00000494357 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
ZNF655-224ENST00000494357 ATP1B4Q9UN42 357 aaPredicted RBP12.21□□□□□ -0.46
ZNF655-224ENST00000494357 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
ZNF655-224ENST00000494357 WIZO95785 1651 aa12.2□□□□□ -0.46
ZNF655-224ENST00000494357 CEP164Q9UPV0 1460 aa12.2□□□□□ -0.46
ZNF655-224ENST00000494357 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
ZNF655-224ENST00000494357 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
ZNF655-224ENST00000494357 CLIP1P30622 1438 aa12.16□□□□□ -0.46
ZNF655-224ENST00000494357 SMARCA4P51532 1647 aa12.15□□□□□ -0.46
ZNF655-224ENST00000494357 YTHDC1Q96MU7 727 aaKnown RBP12.15□□□□□ -0.47
ZNF655-224ENST00000494357 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
ZNF655-224ENST00000494357 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
ZNF655-224ENST00000494357 NEFLP07196 543 aa12.09□□□□□ -0.47
ZNF655-224ENST00000494357 ITGAEP38570 1179 aa12.06□□□□□ -0.48
ZNF655-224ENST00000494357 CLSPNQ9HAW4 1339 aa12.05□□□□□ -0.48
ZNF655-224ENST00000494357 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
ZNF655-224ENST00000494357 SOGA1O94964 1423 aa12.03□□□□□ -0.48
ZNF655-224ENST00000494357 KIF27Q86VH2 1401 aa12.02□□□□□ -0.49
ZNF655-224ENST00000494357 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
ZNF655-224ENST00000494357 FAM50AQ14320 339 aaKnown RBP11.98□□□□□ -0.49
ZNF655-224ENST00000494357 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
ZNF655-224ENST00000494357 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
ZNF655-224ENST00000494357 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
ZNF655-224ENST00000494357 KIF21BO75037 1637 aa11.84□□□□□ -0.51
ZNF655-224ENST00000494357 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
ZNF655-224ENST00000494357 ANP32CO43423 234 aa11.84□□□□□ -0.51
ZNF655-224ENST00000494357 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
ZNF655-224ENST00000494357 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
ZNF655-224ENST00000494357 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
ZNF655-224ENST00000494357 P3H3Q8IVL6 736 aa11.77□□□□□ -0.52
ZNF655-224ENST00000494357 TRIM52Q96A61 297 aa11.77□□□□□ -0.52
ZNF655-224ENST00000494357 TONSLQ96HA7 1378 aa11.77□□□□□ -0.53
ZNF655-224ENST00000494357 CUX2O14529 1486 aa11.77□□□□□ -0.53
ZNF655-224ENST00000494357 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.53
ZNF655-224ENST00000494357 RUSC2Q8N2Y8 1516 aa11.76□□□□□ -0.53
ZNF655-224ENST00000494357 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
ZNF655-224ENST00000494357 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
ZNF655-224ENST00000494357 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
ZNF655-224ENST00000494357 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
ZNF655-224ENST00000494357 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
ZNF655-224ENST00000494357 MIER1Q8N108 512 aa11.75□□□□□ -0.53
ZNF655-224ENST00000494357 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
ZNF655-224ENST00000494357 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
ZNF655-224ENST00000494357 CADPSQ9ULU8 1353 aa11.7□□□□□ -0.54
ZNF655-224ENST00000494357 HMGXB3Q12766 1538 aa11.7□□□□□ -0.54
ZNF655-224ENST00000494357 EIF4G1Q04637 1599 aaKnown RBP11.7□□□□□ -0.54
ZNF655-224ENST00000494357 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
ZNF655-224ENST00000494357 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
ZNF655-224ENST00000494357 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
ZNF655-224ENST00000494357 SETD5Q9C0A6 1442 aa11.66□□□□□ -0.54
ZNF655-224ENST00000494357 FMN1Q68DA7 1419 aa11.64□□□□□ -0.55
ZNF655-224ENST00000494357 ARHGAP35Q9NRY4 1499 aa11.64□□□□□ -0.55
ZNF655-224ENST00000494357 UNC13AQ9UPW8 1703 aa11.63□□□□□ -0.55
ZNF655-224ENST00000494357 KANK4Q5T7N3 995 aaPredicted RBP11.61□□□□□ -0.55
ZNF655-224ENST00000494357 CFTRP13569 1480 aa11.61□□□□□ -0.55
ZNF655-224ENST00000494357 DDX10Q13206 875 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms