RNA–Protein interactions for RNA: ENST00000493707.1

UBE2E1-210, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 857 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-210ENST00000493707 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
UBE2E1-210ENST00000493707 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
UBE2E1-210ENST00000493707 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
UBE2E1-210ENST00000493707 PHF23Q9BUL5 403 aaPredicted RBP20.93■□□□□ 0.94
UBE2E1-210ENST00000493707 FOXD1Q16676 465 aa19.75■□□□□ 0.75
UBE2E1-210ENST00000493707 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
UBE2E1-210ENST00000493707 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
UBE2E1-210ENST00000493707 ADRA2BP18089 450 aa18.62■□□□□ 0.57
UBE2E1-210ENST00000493707 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
UBE2E1-210ENST00000493707 MSH5O43196 834 aa18.25■□□□□ 0.51
UBE2E1-210ENST00000493707 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
UBE2E1-210ENST00000493707 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
UBE2E1-210ENST00000493707 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
UBE2E1-210ENST00000493707 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
UBE2E1-210ENST00000493707 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
UBE2E1-210ENST00000493707 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
UBE2E1-210ENST00000493707 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
UBE2E1-210ENST00000493707 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
UBE2E1-210ENST00000493707 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
UBE2E1-210ENST00000493707 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
UBE2E1-210ENST00000493707 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
UBE2E1-210ENST00000493707 KCNA4P22459 653 aa15.84■□□□□ 0.13
UBE2E1-210ENST00000493707 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
UBE2E1-210ENST00000493707 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
UBE2E1-210ENST00000493707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
UBE2E1-210ENST00000493707 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
UBE2E1-210ENST00000493707 C1QBPQ07021 282 aaKnown RBP15.36■□□□□ 0.05
UBE2E1-210ENST00000493707 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
UBE2E1-210ENST00000493707 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
UBE2E1-210ENST00000493707 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
UBE2E1-210ENST00000493707 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.02
UBE2E1-210ENST00000493707 CAPN15O75808 1086 aa14.91□□□□□ -0.02
UBE2E1-210ENST00000493707 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
UBE2E1-210ENST00000493707 DSG3P32926 999 aa14.76□□□□□ -0.05
UBE2E1-210ENST00000493707 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
UBE2E1-210ENST00000493707 ABCB7O75027 752 aa14.67□□□□□ -0.06
UBE2E1-210ENST00000493707 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
UBE2E1-210ENST00000493707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
UBE2E1-210ENST00000493707 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
UBE2E1-210ENST00000493707 ZBTB22O15209 634 aa14.61□□□□□ -0.07
UBE2E1-210ENST00000493707 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
UBE2E1-210ENST00000493707 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
UBE2E1-210ENST00000493707 APLP2Q06481 763 aa14.56□□□□□ -0.08
UBE2E1-210ENST00000493707 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
UBE2E1-210ENST00000493707 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
UBE2E1-210ENST00000493707 POLA2Q14181 598 aa14.35□□□□□ -0.11
UBE2E1-210ENST00000493707 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
UBE2E1-210ENST00000493707 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
UBE2E1-210ENST00000493707 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
UBE2E1-210ENST00000493707 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
UBE2E1-210ENST00000493707 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
UBE2E1-210ENST00000493707 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
UBE2E1-210ENST00000493707 POTEHQ6S545 545 aa13.86□□□□□ -0.19
UBE2E1-210ENST00000493707 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
UBE2E1-210ENST00000493707 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
UBE2E1-210ENST00000493707 FBLN2P98095 1184 aa13.7□□□□□ -0.22
UBE2E1-210ENST00000493707 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
UBE2E1-210ENST00000493707 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
UBE2E1-210ENST00000493707 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
UBE2E1-210ENST00000493707 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
UBE2E1-210ENST00000493707 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
UBE2E1-210ENST00000493707 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
UBE2E1-210ENST00000493707 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
UBE2E1-210ENST00000493707 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
UBE2E1-210ENST00000493707 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
UBE2E1-210ENST00000493707 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
UBE2E1-210ENST00000493707 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
UBE2E1-210ENST00000493707 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
UBE2E1-210ENST00000493707 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE2E1-210ENST00000493707 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
UBE2E1-210ENST00000493707 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
UBE2E1-210ENST00000493707 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
UBE2E1-210ENST00000493707 SPDYE4A6NLX3 237 aa13.14□□□□□ -0.31
UBE2E1-210ENST00000493707 ABCC9O60706 1549 aa13.13□□□□□ -0.31
UBE2E1-210ENST00000493707 HAX1O00165 279 aa13.13□□□□□ -0.31
UBE2E1-210ENST00000493707 EVX2Q03828 476 aa13.11□□□□□ -0.31
UBE2E1-210ENST00000493707 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
UBE2E1-210ENST00000493707 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
UBE2E1-210ENST00000493707 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
UBE2E1-210ENST00000493707 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
UBE2E1-210ENST00000493707 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
UBE2E1-210ENST00000493707 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
UBE2E1-210ENST00000493707 PROM2Q8N271 834 aa12.8□□□□□ -0.36
UBE2E1-210ENST00000493707 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
UBE2E1-210ENST00000493707 FKBP8Q14318 412 aa12.72□□□□□ -0.37
UBE2E1-210ENST00000493707 GABBR2O75899 941 aa12.71□□□□□ -0.37
UBE2E1-210ENST00000493707 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
UBE2E1-210ENST00000493707 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
UBE2E1-210ENST00000493707 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
UBE2E1-210ENST00000493707 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
UBE2E1-210ENST00000493707 MIER1Q8N108 512 aa12.52□□□□□ -0.41
UBE2E1-210ENST00000493707 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
UBE2E1-210ENST00000493707 NACADO15069 1562 aa12.52□□□□□ -0.41
UBE2E1-210ENST00000493707 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBE2E1-210ENST00000493707 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
UBE2E1-210ENST00000493707 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
UBE2E1-210ENST00000493707 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
UBE2E1-210ENST00000493707 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
UBE2E1-210ENST00000493707 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.42
UBE2E1-210ENST00000493707 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms