RNA–Protein interactions for RNA: ENST00000493642.5

CASP2-206, Transcript of caspase 2, humanhuman

TSL 1 (best)

Gene CASP2, Length 2,166 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP2-206ENST00000493642 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
CASP2-206ENST00000493642 CCDC180Q9P1Z9 1646 aa19.63■□□□□ 0.73
CASP2-206ENST00000493642 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
CASP2-206ENST00000493642 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
CASP2-206ENST00000493642 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
CASP2-206ENST00000493642 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
CASP2-206ENST00000493642 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.54
CASP2-206ENST00000493642 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
CASP2-206ENST00000493642 NACADO15069 1562 aa18.15■□□□□ 0.5
CASP2-206ENST00000493642 ABCC9O60706 1549 aa18.07■□□□□ 0.48
CASP2-206ENST00000493642 SCRIBQ14160 1630 aa18.02■□□□□ 0.47
CASP2-206ENST00000493642 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
CASP2-206ENST00000493642 RSF1Q96T23 1441 aaPredicted RBP17.68■□□□□ 0.42
CASP2-206ENST00000493642 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
CASP2-206ENST00000493642 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
CASP2-206ENST00000493642 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
CASP2-206ENST00000493642 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
CASP2-206ENST00000493642 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
CASP2-206ENST00000493642 WIZO95785 1651 aa17.37■□□□□ 0.37
CASP2-206ENST00000493642 SMARCA4P51532 1647 aa17.33■□□□□ 0.36
CASP2-206ENST00000493642 BICRAQ9NZM4 1560 aa17.31■□□□□ 0.36
CASP2-206ENST00000493642 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
CASP2-206ENST00000493642 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
CASP2-206ENST00000493642 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
CASP2-206ENST00000493642 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.33
CASP2-206ENST00000493642 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.33
CASP2-206ENST00000493642 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
CASP2-206ENST00000493642 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
CASP2-206ENST00000493642 LOC105371045A0A1W2PR82 267 aa16.91■□□□□ 0.3
CASP2-206ENST00000493642 ATAD2BQ9ULI0 1458 aa16.91■□□□□ 0.3
CASP2-206ENST00000493642 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
CASP2-206ENST00000493642 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
CASP2-206ENST00000493642 HMGXB3Q12766 1538 aa16.76■□□□□ 0.27
CASP2-206ENST00000493642 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
CASP2-206ENST00000493642 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
CASP2-206ENST00000493642 EEA1Q15075 1411 aa16.67■□□□□ 0.26
CASP2-206ENST00000493642 WRNQ14191 1432 aaPredicted RBP eCLIP16.64■□□□□ 0.25
CASP2-206ENST00000493642 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
CASP2-206ENST00000493642 SYNJ1O43426 1573 aa16.56■□□□□ 0.24
CASP2-206ENST00000493642 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
CASP2-206ENST00000493642 SOGA1O94964 1423 aa16.52■□□□□ 0.24
CASP2-206ENST00000493642 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
CASP2-206ENST00000493642 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
CASP2-206ENST00000493642 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
CASP2-206ENST00000493642 HRCP23327 699 aa16.48■□□□□ 0.23
CASP2-206ENST00000493642 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
CASP2-206ENST00000493642 CFTRP13569 1480 aa16.45■□□□□ 0.22
CASP2-206ENST00000493642 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
CASP2-206ENST00000493642 KIF21BO75037 1637 aa16.43■□□□□ 0.22
CASP2-206ENST00000493642 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
CASP2-206ENST00000493642 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
CASP2-206ENST00000493642 RUSC2Q8N2Y8 1516 aa16.42■□□□□ 0.22
CASP2-206ENST00000493642 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
CASP2-206ENST00000493642 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
CASP2-206ENST00000493642 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
CASP2-206ENST00000493642 CUX1P39880 1505 aa16.32■□□□□ 0.2
CASP2-206ENST00000493642 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
CASP2-206ENST00000493642 UBTFP17480 764 aaKnown RBP16.29■□□□□ 0.2
CASP2-206ENST00000493642 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
CASP2-206ENST00000493642 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
CASP2-206ENST00000493642 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
CASP2-206ENST00000493642 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
CASP2-206ENST00000493642 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
CASP2-206ENST00000493642 CLIP1P30622 1438 aa16.15■□□□□ 0.18
CASP2-206ENST00000493642 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
CASP2-206ENST00000493642 LAMC3Q9Y6N6 1575 aa16.12■□□□□ 0.17
CASP2-206ENST00000493642 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
CASP2-206ENST00000493642 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
CASP2-206ENST00000493642 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
CASP2-206ENST00000493642 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
CASP2-206ENST00000493642 CUX2O14529 1486 aa16.04■□□□□ 0.16
CASP2-206ENST00000493642 TOPBP1Q92547 1522 aa16■□□□□ 0.15
CASP2-206ENST00000493642 NESP48681 1621 aa15.98■□□□□ 0.15
CASP2-206ENST00000493642 IGF1RP08069 1367 aa15.98■□□□□ 0.15
CASP2-206ENST00000493642 ABCA10Q8WWZ4 1543 aa15.97■□□□□ 0.15
CASP2-206ENST00000493642 APLP2Q06481 763 aa15.96■□□□□ 0.14
CASP2-206ENST00000493642 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.14
CASP2-206ENST00000493642 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
CASP2-206ENST00000493642 ARAP1Q96P48 1450 aa15.93■□□□□ 0.14
CASP2-206ENST00000493642 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
CASP2-206ENST00000493642 CUL7Q14999 1698 aa15.92■□□□□ 0.14
CASP2-206ENST00000493642 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
CASP2-206ENST00000493642 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
CASP2-206ENST00000493642 KIF21AQ7Z4S6 1674 aa15.88■□□□□ 0.13
CASP2-206ENST00000493642 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
CASP2-206ENST00000493642 RAD54L2Q9Y4B4 1467 aa15.86■□□□□ 0.13
CASP2-206ENST00000493642 TTBK1Q5TCY1 1321 aaPredicted RBP15.85■□□□□ 0.13
CASP2-206ENST00000493642 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.13
CASP2-206ENST00000493642 ABCA5Q8WWZ7 1642 aa15.82■□□□□ 0.12
CASP2-206ENST00000493642 CCER1Q8TC90 406 aaPredicted RBP15.82■□□□□ 0.12
CASP2-206ENST00000493642 CTTNBP2Q8WZ74 1663 aa15.81■□□□□ 0.12
CASP2-206ENST00000493642 MAP3K1Q13233 1512 aa15.79■□□□□ 0.12
CASP2-206ENST00000493642 EFCAB5A4FU69 1503 aa15.77■□□□□ 0.12
CASP2-206ENST00000493642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.11
CASP2-206ENST00000493642 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
CASP2-206ENST00000493642 FHAD1B1AJZ9 1412 aa15.75■□□□□ 0.11
CASP2-206ENST00000493642 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
CASP2-206ENST00000493642 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
CASP2-206ENST00000493642 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
CASP2-206ENST00000493642 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms