RNA–Protein interactions for RNA: ENST00000492846.1

FMR1-212, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-212ENST00000492846 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
FMR1-212ENST00000492846 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
FMR1-212ENST00000492846 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
FMR1-212ENST00000492846 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
FMR1-212ENST00000492846 FOXD1Q16676 465 aa20.02■□□□□ 0.8
FMR1-212ENST00000492846 PLPPR3Q6T4P5 718 aa19.81■□□□□ 0.76
FMR1-212ENST00000492846 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
FMR1-212ENST00000492846 PPP6R1Q9UPN7 881 aa19.24■□□□□ 0.67
FMR1-212ENST00000492846 ADRA2BP18089 450 aa19.21■□□□□ 0.67
FMR1-212ENST00000492846 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
FMR1-212ENST00000492846 MSH5O43196 834 aa18.31■□□□□ 0.52
FMR1-212ENST00000492846 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
FMR1-212ENST00000492846 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
FMR1-212ENST00000492846 CCDC180Q9P1Z9 1646 aa17.3■□□□□ 0.36
FMR1-212ENST00000492846 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
FMR1-212ENST00000492846 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
FMR1-212ENST00000492846 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
FMR1-212ENST00000492846 KCNA4P22459 653 aa17.07■□□□□ 0.32
FMR1-212ENST00000492846 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
FMR1-212ENST00000492846 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
FMR1-212ENST00000492846 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
FMR1-212ENST00000492846 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
FMR1-212ENST00000492846 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
FMR1-212ENST00000492846 ABCC9O60706 1549 aa16.6■□□□□ 0.25
FMR1-212ENST00000492846 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
FMR1-212ENST00000492846 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
FMR1-212ENST00000492846 ZCCHC6Q5VYS8 1495 aaKnown RBP16.3■□□□□ 0.2
FMR1-212ENST00000492846 NACADO15069 1562 aa16.23■□□□□ 0.19
FMR1-212ENST00000492846 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
FMR1-212ENST00000492846 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
FMR1-212ENST00000492846 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
FMR1-212ENST00000492846 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
FMR1-212ENST00000492846 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
FMR1-212ENST00000492846 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
FMR1-212ENST00000492846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
FMR1-212ENST00000492846 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
FMR1-212ENST00000492846 ZBTB22O15209 634 aa15.75■□□□□ 0.11
FMR1-212ENST00000492846 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
FMR1-212ENST00000492846 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
FMR1-212ENST00000492846 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
FMR1-212ENST00000492846 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
FMR1-212ENST00000492846 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
FMR1-212ENST00000492846 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
FMR1-212ENST00000492846 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
FMR1-212ENST00000492846 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
FMR1-212ENST00000492846 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
FMR1-212ENST00000492846 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
FMR1-212ENST00000492846 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
FMR1-212ENST00000492846 MYCNP04198 464 aaPredicted RBP15.43■□□□□ 0.06
FMR1-212ENST00000492846 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
FMR1-212ENST00000492846 CAPN15O75808 1086 aa15.25■□□□□ 0.03
FMR1-212ENST00000492846 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
FMR1-212ENST00000492846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
FMR1-212ENST00000492846 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
FMR1-212ENST00000492846 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
FMR1-212ENST00000492846 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
FMR1-212ENST00000492846 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
FMR1-212ENST00000492846 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
FMR1-212ENST00000492846 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
FMR1-212ENST00000492846 CECR2Q9BXF3 1484 aa15.09■□□□□ 0.01
FMR1-212ENST00000492846 APLP2Q06481 763 aa15.05■□□□□ -0
FMR1-212ENST00000492846 ABCB7O75027 752 aa15.04■□□□□ -0
FMR1-212ENST00000492846 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
FMR1-212ENST00000492846 SMARCA2P51531 1590 aa15.03■□□□□ -0
FMR1-212ENST00000492846 DSG3P32926 999 aa15□□□□□ -0.01
FMR1-212ENST00000492846 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
FMR1-212ENST00000492846 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
FMR1-212ENST00000492846 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
FMR1-212ENST00000492846 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
FMR1-212ENST00000492846 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
FMR1-212ENST00000492846 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
FMR1-212ENST00000492846 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
FMR1-212ENST00000492846 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
FMR1-212ENST00000492846 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
FMR1-212ENST00000492846 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
FMR1-212ENST00000492846 WIZO95785 1651 aa14.87□□□□□ -0.03
FMR1-212ENST00000492846 POLA2Q14181 598 aa14.87□□□□□ -0.03
FMR1-212ENST00000492846 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
FMR1-212ENST00000492846 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
FMR1-212ENST00000492846 LAMC3Q9Y6N6 1575 aa14.54□□□□□ -0.08
FMR1-212ENST00000492846 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
FMR1-212ENST00000492846 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
FMR1-212ENST00000492846 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
FMR1-212ENST00000492846 CFTRP13569 1480 aa14.46□□□□□ -0.09
FMR1-212ENST00000492846 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
FMR1-212ENST00000492846 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
FMR1-212ENST00000492846 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
FMR1-212ENST00000492846 ZBTB12Q9Y330 459 aaPredicted RBP14.4□□□□□ -0.1
FMR1-212ENST00000492846 FBLN2P98095 1184 aa14.39□□□□□ -0.11
FMR1-212ENST00000492846 NESP48681 1621 aa14.37□□□□□ -0.11
FMR1-212ENST00000492846 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
FMR1-212ENST00000492846 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
FMR1-212ENST00000492846 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
FMR1-212ENST00000492846 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
FMR1-212ENST00000492846 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
FMR1-212ENST00000492846 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
FMR1-212ENST00000492846 DNMBPQ6XZF7 1577 aa14.16□□□□□ -0.14
FMR1-212ENST00000492846 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
FMR1-212ENST00000492846 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
FMR1-212ENST00000492846 WDR62O43379 1518 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms