RNA–Protein interactions for RNA: ENST00000492220.1

RPRD2-204, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

TSL 5

Gene RPRD2, Length 4,780 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-204ENST00000492220 DCAF8L2P0C7V8 631 aa21.01■□□□□ 0.95
RPRD2-204ENST00000492220 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
RPRD2-204ENST00000492220 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
RPRD2-204ENST00000492220 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
RPRD2-204ENST00000492220 APLP2Q06481 763 aa19.08■□□□□ 0.64
RPRD2-204ENST00000492220 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
RPRD2-204ENST00000492220 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
RPRD2-204ENST00000492220 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
RPRD2-204ENST00000492220 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
RPRD2-204ENST00000492220 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
RPRD2-204ENST00000492220 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
RPRD2-204ENST00000492220 UBTFP17480 764 aaKnown RBP18.33■□□□□ 0.52
RPRD2-204ENST00000492220 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
RPRD2-204ENST00000492220 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
RPRD2-204ENST00000492220 ATP1B4Q9UN42 357 aaPredicted RBP18.22■□□□□ 0.51
RPRD2-204ENST00000492220 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
RPRD2-204ENST00000492220 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.5
RPRD2-204ENST00000492220 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
RPRD2-204ENST00000492220 NEFLP07196 543 aa17.78■□□□□ 0.44
RPRD2-204ENST00000492220 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
RPRD2-204ENST00000492220 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
RPRD2-204ENST00000492220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.42
RPRD2-204ENST00000492220 HNRNPUL2Q1KMD3 747 aaKnown RBP17.71■□□□□ 0.42
RPRD2-204ENST00000492220 PPARGC1BQ86YN6 1023 aaKnown RBP17.61■□□□□ 0.41
RPRD2-204ENST00000492220 MYT1LQ9UL68 1186 aa17.6■□□□□ 0.41
RPRD2-204ENST00000492220 ABCC9O60706 1549 aa17.6■□□□□ 0.41
RPRD2-204ENST00000492220 ITGAEP38570 1179 aa17.54■□□□□ 0.4
RPRD2-204ENST00000492220 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
RPRD2-204ENST00000492220 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPRD2-204ENST00000492220 HRCP23327 699 aa17.46■□□□□ 0.39
RPRD2-204ENST00000492220 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
RPRD2-204ENST00000492220 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
RPRD2-204ENST00000492220 MYT1Q01538 1121 aa17.27■□□□□ 0.35
RPRD2-204ENST00000492220 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
RPRD2-204ENST00000492220 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
RPRD2-204ENST00000492220 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
RPRD2-204ENST00000492220 CSRNP3Q8WYN3 585 aa17.12■□□□□ 0.33
RPRD2-204ENST00000492220 DIEXFQ68CQ4 756 aaKnown RBP17.07■□□□□ 0.32
RPRD2-204ENST00000492220 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
RPRD2-204ENST00000492220 FBLN2P98095 1184 aa17.05■□□□□ 0.32
RPRD2-204ENST00000492220 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.32
RPRD2-204ENST00000492220 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
RPRD2-204ENST00000492220 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
RPRD2-204ENST00000492220 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
RPRD2-204ENST00000492220 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
RPRD2-204ENST00000492220 ANP32CO43423 234 aa16.91■□□□□ 0.3
RPRD2-204ENST00000492220 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
RPRD2-204ENST00000492220 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
RPRD2-204ENST00000492220 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
RPRD2-204ENST00000492220 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
RPRD2-204ENST00000492220 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
RPRD2-204ENST00000492220 NEFMP07197 916 aa16.75■□□□□ 0.27
RPRD2-204ENST00000492220 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPRD2-204ENST00000492220 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
RPRD2-204ENST00000492220 ZNF777Q9ULD5 760 aaPredicted RBP16.72■□□□□ 0.27
RPRD2-204ENST00000492220 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
RPRD2-204ENST00000492220 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
RPRD2-204ENST00000492220 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
RPRD2-204ENST00000492220 ARID3CA6NKF2 412 aa16.65■□□□□ 0.26
RPRD2-204ENST00000492220 BCANQ96GW7 911 aa16.64■□□□□ 0.25
RPRD2-204ENST00000492220 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
RPRD2-204ENST00000492220 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
RPRD2-204ENST00000492220 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
RPRD2-204ENST00000492220 EEA1Q15075 1411 aa16.59■□□□□ 0.25
RPRD2-204ENST00000492220 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
RPRD2-204ENST00000492220 TSPY4P0CV99 314 aa16.56■□□□□ 0.24
RPRD2-204ENST00000492220 TSPY10P0CW01 314 aa16.56■□□□□ 0.24
RPRD2-204ENST00000492220 NACADO15069 1562 aa16.54■□□□□ 0.24
RPRD2-204ENST00000492220 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.23
RPRD2-204ENST00000492220 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
RPRD2-204ENST00000492220 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
RPRD2-204ENST00000492220 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
RPRD2-204ENST00000492220 CLIP1P30622 1438 aa16.45■□□□□ 0.22
RPRD2-204ENST00000492220 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
RPRD2-204ENST00000492220 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
RPRD2-204ENST00000492220 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
RPRD2-204ENST00000492220 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
RPRD2-204ENST00000492220 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
RPRD2-204ENST00000492220 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
RPRD2-204ENST00000492220 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
RPRD2-204ENST00000492220 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
RPRD2-204ENST00000492220 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
RPRD2-204ENST00000492220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.33■□□□□ 0.23e-8■□□□□ 8.7
RPRD2-204ENST00000492220 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
RPRD2-204ENST00000492220 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
RPRD2-204ENST00000492220 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
RPRD2-204ENST00000492220 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
RPRD2-204ENST00000492220 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
RPRD2-204ENST00000492220 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
RPRD2-204ENST00000492220 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
RPRD2-204ENST00000492220 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
RPRD2-204ENST00000492220 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
RPRD2-204ENST00000492220 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
RPRD2-204ENST00000492220 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
RPRD2-204ENST00000492220 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
RPRD2-204ENST00000492220 FAM9BQ8IZU0 186 aa16.21■□□□□ 0.19
RPRD2-204ENST00000492220 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
RPRD2-204ENST00000492220 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
RPRD2-204ENST00000492220 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
RPRD2-204ENST00000492220 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms