RNA–Protein interactions for RNA: ENST00000491238.5

FOXP1-212, Transcript of forkhead box P1, humanhuman

TSL 2 BASIC

Gene FOXP1, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-212ENST00000491238 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
FOXP1-212ENST00000491238 SHROOM4Q9ULL8 1493 aa11.92□□□□□ -0.5
FOXP1-212ENST00000491238 ZCCHC6Q5VYS8 1495 aaKnown RBP11.84□□□□□ -0.51
FOXP1-212ENST00000491238 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
FOXP1-212ENST00000491238 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
FOXP1-212ENST00000491238 HRCP23327 699 aa11.65□□□□□ -0.55
FOXP1-212ENST00000491238 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
FOXP1-212ENST00000491238 MYO15BQ96JP2 1530 aa11.59□□□□□ -0.55
FOXP1-212ENST00000491238 DCAF1Q9Y4B6 1507 aa11.51□□□□□ -0.57
FOXP1-212ENST00000491238 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
FOXP1-212ENST00000491238 DCAF8L2P0C7V8 631 aa11.39□□□□□ -0.59
FOXP1-212ENST00000491238 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
FOXP1-212ENST00000491238 PPARGC1BQ86YN6 1023 aaKnown RBP11.26□□□□□ -0.61
FOXP1-212ENST00000491238 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
FOXP1-212ENST00000491238 ABCC9O60706 1549 aa11.21□□□□□ -0.61
FOXP1-212ENST00000491238 ZEB1P37275 1124 aaPredicted RBP11.16□□□□□ -0.62
FOXP1-212ENST00000491238 AEBP2Q6ZN18 517 aaPredicted RBP11.1□□□□□ -0.63
FOXP1-212ENST00000491238 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
FOXP1-212ENST00000491238 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
FOXP1-212ENST00000491238 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
FOXP1-212ENST00000491238 SCRIBQ14160 1630 aa11.01□□□□□ -0.65
FOXP1-212ENST00000491238 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
FOXP1-212ENST00000491238 FAM9AQ8IZU1 332 aaPredicted RBP10.87□□□□□ -0.67
FOXP1-212ENST00000491238 NACADO15069 1562 aa10.87□□□□□ -0.67
FOXP1-212ENST00000491238 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
FOXP1-212ENST00000491238 SCAF1Q9H7N4 1312 aaKnown RBP10.81□□□□□ -0.68
FOXP1-212ENST00000491238 CECR2Q9BXF3 1484 aa10.81□□□□□ -0.68
FOXP1-212ENST00000491238 WIZO95785 1651 aa10.77□□□□□ -0.69
FOXP1-212ENST00000491238 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.69
FOXP1-212ENST00000491238 EIF4G1Q04637 1599 aaKnown RBP10.74□□□□□ -0.69
FOXP1-212ENST00000491238 EHMT2Q96KQ7 1210 aa10.72□□□□□ -0.69
FOXP1-212ENST00000491238 CCER1Q8TC90 406 aaPredicted RBP10.72□□□□□ -0.69
FOXP1-212ENST00000491238 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.69
FOXP1-212ENST00000491238 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
FOXP1-212ENST00000491238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.68□□□□□ -0.7
FOXP1-212ENST00000491238 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.71
FOXP1-212ENST00000491238 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
FOXP1-212ENST00000491238 DIEXFQ68CQ4 756 aaKnown RBP10.63□□□□□ -0.71
FOXP1-212ENST00000491238 EEA1Q15075 1411 aa10.62□□□□□ -0.71
FOXP1-212ENST00000491238 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
FOXP1-212ENST00000491238 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
FOXP1-212ENST00000491238 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
FOXP1-212ENST00000491238 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
FOXP1-212ENST00000491238 SMARCA4P51532 1647 aa10.58□□□□□ -0.72
FOXP1-212ENST00000491238 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
FOXP1-212ENST00000491238 SMARCA2P51531 1590 aa10.57□□□□□ -0.72
FOXP1-212ENST00000491238 MYT1Q01538 1121 aa10.55□□□□□ -0.72
FOXP1-212ENST00000491238 GTF3C3Q9Y5Q9 886 aa10.54□□□□□ -0.72
FOXP1-212ENST00000491238 CSRNP3Q8WYN3 585 aa10.53□□□□□ -0.72
FOXP1-212ENST00000491238 SOGA1O94964 1423 aa10.53□□□□□ -0.72
FOXP1-212ENST00000491238 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
FOXP1-212ENST00000491238 GOLGA3Q08378 1498 aa10.51□□□□□ -0.73
FOXP1-212ENST00000491238 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
FOXP1-212ENST00000491238 RUSC2Q8N2Y8 1516 aa10.44□□□□□ -0.74
FOXP1-212ENST00000491238 TTBK1Q5TCY1 1321 aaPredicted RBP10.44□□□□□ -0.74
FOXP1-212ENST00000491238 CEP164Q9UPV0 1460 aa10.44□□□□□ -0.74
FOXP1-212ENST00000491238 KIF21BO75037 1637 aa10.43□□□□□ -0.74
FOXP1-212ENST00000491238 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
FOXP1-212ENST00000491238 PEG3Q9GZU2 1588 aa10.4□□□□□ -0.74
FOXP1-212ENST00000491238 BAZ1BQ9UIG0 1483 aaKnown RBP10.39□□□□□ -0.75
FOXP1-212ENST00000491238 VPS8Q8N3P4 1428 aa10.37□□□□□ -0.75
FOXP1-212ENST00000491238 CLIP1P30622 1438 aa10.37□□□□□ -0.75
FOXP1-212ENST00000491238 MIER1Q8N108 512 aa10.35□□□□□ -0.75
FOXP1-212ENST00000491238 SYNJ1O43426 1573 aa10.34□□□□□ -0.75
FOXP1-212ENST00000491238 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
FOXP1-212ENST00000491238 APLP2Q06481 763 aa10.33□□□□□ -0.76
FOXP1-212ENST00000491238 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
FOXP1-212ENST00000491238 YTHDC1Q96MU7 727 aaKnown RBP10.31□□□□□ -0.76
FOXP1-212ENST00000491238 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
FOXP1-212ENST00000491238 RAPGEF2Q9Y4G8 1499 aa10.27□□□□□ -0.77
FOXP1-212ENST00000491238 ATAD2BQ9ULI0 1458 aa10.25□□□□□ -0.77
FOXP1-212ENST00000491238 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
FOXP1-212ENST00000491238 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
FOXP1-212ENST00000491238 DHX57Q6P158 1386 aaKnown RBP10.22□□□□□ -0.77
FOXP1-212ENST00000491238 BIVM-ERCC5R4GMW8 1640 aa10.21□□□□□ -0.77
FOXP1-212ENST00000491238 PABPN1Q86U42 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
FOXP1-212ENST00000491238 PRXQ9BXM0 1461 aa10.19□□□□□ -0.78
FOXP1-212ENST00000491238 RRBP1Q9P2E9 1410 aaKnown RBP10.17□□□□□ -0.78
FOXP1-212ENST00000491238 CUX2O14529 1486 aa10.17□□□□□ -0.78
FOXP1-212ENST00000491238 ARAP1Q96P48 1450 aa10.17□□□□□ -0.78
FOXP1-212ENST00000491238 RANGAP1P46060 587 aaPredicted RBP10.12□□□□□ -0.79
FOXP1-212ENST00000491238 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
FOXP1-212ENST00000491238 KANK4Q5T7N3 995 aaPredicted RBP10.11□□□□□ -0.79
FOXP1-212ENST00000491238 KIF27Q86VH2 1401 aa10.1□□□□□ -0.79
FOXP1-212ENST00000491238 CCNB3Q8WWL7 1395 aa10.1□□□□□ -0.79
FOXP1-212ENST00000491238 MAP3K1Q13233 1512 aa10.07□□□□□ -0.8
FOXP1-212ENST00000491238 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
FOXP1-212ENST00000491238 CUX1P39880 1505 aa10.06□□□□□ -0.8
FOXP1-212ENST00000491238 ARHGAP35Q9NRY4 1499 aa10.06□□□□□ -0.8
FOXP1-212ENST00000491238 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
FOXP1-212ENST00000491238 RAB3GAP2Q9H2M9 1393 aa10.01□□□□□ -0.81
FOXP1-212ENST00000491238 CFTRP13569 1480 aa10.01□□□□□ -0.81
FOXP1-212ENST00000491238 MAPKBP1O60336 1514 aa10.01□□□□□ -0.81
FOXP1-212ENST00000491238 TIAM1Q13009 1591 aa10□□□□□ -0.81
FOXP1-212ENST00000491238 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
FOXP1-212ENST00000491238 TIMELESSQ9UNS1 1208 aa10□□□□□ -0.81
FOXP1-212ENST00000491238 SETD5Q9C0A6 1442 aa10□□□□□ -0.81
FOXP1-212ENST00000491238 LRRC9Q6ZRR7 1453 aa9.97□□□□□ -0.81
FOXP1-212ENST00000491238 PRDM2Q13029 1718 aa9.96□□□□□ -0.81
FOXP1-212ENST00000491238 ITGAEP38570 1179 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms