RNA–Protein interactions for RNA: ENST00000490205.1

NELFCD-210, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-210ENST00000490205 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
NELFCD-210ENST00000490205 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
NELFCD-210ENST00000490205 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
NELFCD-210ENST00000490205 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
NELFCD-210ENST00000490205 FOXD1Q16676 465 aa18.79■□□□□ 0.6
NELFCD-210ENST00000490205 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
NELFCD-210ENST00000490205 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
NELFCD-210ENST00000490205 ADRA2BP18089 450 aa17.71■□□□□ 0.43
NELFCD-210ENST00000490205 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
NELFCD-210ENST00000490205 MSH5O43196 834 aa17.55■□□□□ 0.4
NELFCD-210ENST00000490205 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
NELFCD-210ENST00000490205 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
NELFCD-210ENST00000490205 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
NELFCD-210ENST00000490205 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
NELFCD-210ENST00000490205 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
NELFCD-210ENST00000490205 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
NELFCD-210ENST00000490205 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
NELFCD-210ENST00000490205 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
NELFCD-210ENST00000490205 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
NELFCD-210ENST00000490205 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
NELFCD-210ENST00000490205 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
NELFCD-210ENST00000490205 KCNA4P22459 653 aa15.2■□□□□ 0.02
NELFCD-210ENST00000490205 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
NELFCD-210ENST00000490205 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
NELFCD-210ENST00000490205 CACNB1Q02641 598 aaPredicted RBP14.91□□□□□ -0.02
NELFCD-210ENST00000490205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.035e-11■■□□□ 11.4
NELFCD-210ENST00000490205 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
NELFCD-210ENST00000490205 SLC4A2P04920 1241 aa14.53□□□□□ -0.08
NELFCD-210ENST00000490205 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
NELFCD-210ENST00000490205 SLC4A1APQ9BWU0 796 aaKnown RBP14.43□□□□□ -0.1
NELFCD-210ENST00000490205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
NELFCD-210ENST00000490205 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
NELFCD-210ENST00000490205 CAPN15O75808 1086 aa14.26□□□□□ -0.13
NELFCD-210ENST00000490205 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
NELFCD-210ENST00000490205 APLP2Q06481 763 aa14.24□□□□□ -0.13
NELFCD-210ENST00000490205 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
NELFCD-210ENST00000490205 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
NELFCD-210ENST00000490205 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
NELFCD-210ENST00000490205 DSG3P32926 999 aa14.09□□□□□ -0.15
NELFCD-210ENST00000490205 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
NELFCD-210ENST00000490205 ZNF219Q9P2Y4 722 aaPredicted RBP14.08□□□□□ -0.16
NELFCD-210ENST00000490205 ZBTB22O15209 634 aa13.95□□□□□ -0.18
NELFCD-210ENST00000490205 ABCB7O75027 752 aa13.92□□□□□ -0.18
NELFCD-210ENST00000490205 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
NELFCD-210ENST00000490205 POLA2Q14181 598 aa13.75□□□□□ -0.21
NELFCD-210ENST00000490205 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
NELFCD-210ENST00000490205 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
NELFCD-210ENST00000490205 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
NELFCD-210ENST00000490205 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
NELFCD-210ENST00000490205 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
NELFCD-210ENST00000490205 FBLN2P98095 1184 aa13.29□□□□□ -0.28
NELFCD-210ENST00000490205 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
NELFCD-210ENST00000490205 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
NELFCD-210ENST00000490205 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
NELFCD-210ENST00000490205 POTEHQ6S545 545 aa13.14□□□□□ -0.31
NELFCD-210ENST00000490205 SPDYE2BA6NHP3 402 aa13.1□□□□□ -0.31
NELFCD-210ENST00000490205 SPDYE6P0CI01 402 aa13.1□□□□□ -0.31
NELFCD-210ENST00000490205 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
NELFCD-210ENST00000490205 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
NELFCD-210ENST00000490205 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
NELFCD-210ENST00000490205 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
NELFCD-210ENST00000490205 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
NELFCD-210ENST00000490205 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
NELFCD-210ENST00000490205 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
NELFCD-210ENST00000490205 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
NELFCD-210ENST00000490205 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
NELFCD-210ENST00000490205 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
NELFCD-210ENST00000490205 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
NELFCD-210ENST00000490205 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
NELFCD-210ENST00000490205 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
NELFCD-210ENST00000490205 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
NELFCD-210ENST00000490205 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
NELFCD-210ENST00000490205 HAX1O00165 279 aa12.52□□□□□ -0.41
NELFCD-210ENST00000490205 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
NELFCD-210ENST00000490205 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
NELFCD-210ENST00000490205 PROM2Q8N271 834 aa12.39□□□□□ -0.43
NELFCD-210ENST00000490205 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
NELFCD-210ENST00000490205 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
NELFCD-210ENST00000490205 EVX2Q03828 476 aa12.33□□□□□ -0.44
NELFCD-210ENST00000490205 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
NELFCD-210ENST00000490205 FKBP8Q14318 412 aa12.3□□□□□ -0.44
NELFCD-210ENST00000490205 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
NELFCD-210ENST00000490205 NPM1P06748 294 aaKnown RBP eCLIP12.16□□□□□ -0.46
NELFCD-210ENST00000490205 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
NELFCD-210ENST00000490205 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
NELFCD-210ENST00000490205 GABBR2O75899 941 aa12.1□□□□□ -0.47
NELFCD-210ENST00000490205 MIER1Q8N108 512 aa12.1□□□□□ -0.47
NELFCD-210ENST00000490205 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
NELFCD-210ENST00000490205 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
NELFCD-210ENST00000490205 CLCN6P51797 869 aa12.06□□□□□ -0.48
NELFCD-210ENST00000490205 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
NELFCD-210ENST00000490205 ZNF579Q8NAF0 562 aaKnown RBP12.03□□□□□ -0.48
NELFCD-210ENST00000490205 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
NELFCD-210ENST00000490205 ZBTB47Q9UFB7 747 aaPredicted RBP11.96□□□□□ -0.49
NELFCD-210ENST00000490205 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
NELFCD-210ENST00000490205 PHF12Q96QT6 1004 aa11.91□□□□□ -0.5
NELFCD-210ENST00000490205 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
NELFCD-210ENST00000490205 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
NELFCD-210ENST00000490205 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
NELFCD-210ENST00000490205 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms