RNA–Protein interactions for RNA: ENST00000489954.1

XPO1-221, Transcript of exportin 1, humanhuman

TSL 4

Gene XPO1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO1-221ENST00000489954 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
XPO1-221ENST00000489954 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
XPO1-221ENST00000489954 SENP3Q9H4L4 574 aaPredicted RBP23.21■■□□□ 1.31
XPO1-221ENST00000489954 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
XPO1-221ENST00000489954 FOXD1Q16676 465 aa21.69■■□□□ 1.06
XPO1-221ENST00000489954 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
XPO1-221ENST00000489954 MSH5O43196 834 aa20.46■□□□□ 0.87
XPO1-221ENST00000489954 PIAS4Q8N2W9 510 aaPredicted RBP20.15■□□□□ 0.82
XPO1-221ENST00000489954 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
XPO1-221ENST00000489954 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
XPO1-221ENST00000489954 ADRA2BP18089 450 aa19.83■□□□□ 0.77
XPO1-221ENST00000489954 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
XPO1-221ENST00000489954 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
XPO1-221ENST00000489954 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
XPO1-221ENST00000489954 CACNB1Q02641 598 aaPredicted RBP17.77■□□□□ 0.44
XPO1-221ENST00000489954 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
XPO1-221ENST00000489954 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
XPO1-221ENST00000489954 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
XPO1-221ENST00000489954 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
XPO1-221ENST00000489954 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
XPO1-221ENST00000489954 RNF216Q9NWF9 866 aaPredicted RBP17.25■□□□□ 0.35
XPO1-221ENST00000489954 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
XPO1-221ENST00000489954 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
XPO1-221ENST00000489954 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
XPO1-221ENST00000489954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.251e-7■■■□□ 15.9
XPO1-221ENST00000489954 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
XPO1-221ENST00000489954 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
XPO1-221ENST00000489954 KCNA4P22459 653 aa16.19■□□□□ 0.18
XPO1-221ENST00000489954 DSG3P32926 999 aa16.17■□□□□ 0.18
XPO1-221ENST00000489954 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
XPO1-221ENST00000489954 POTEHQ6S545 545 aa16.13■□□□□ 0.17
XPO1-221ENST00000489954 CAPN15O75808 1086 aa16.12■□□□□ 0.17
XPO1-221ENST00000489954 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
XPO1-221ENST00000489954 APLP2Q06481 763 aa15.75■□□□□ 0.11
XPO1-221ENST00000489954 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
XPO1-221ENST00000489954 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
XPO1-221ENST00000489954 ABCB7O75027 752 aa15.71■□□□□ 0.11
XPO1-221ENST00000489954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
XPO1-221ENST00000489954 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
XPO1-221ENST00000489954 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
XPO1-221ENST00000489954 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
XPO1-221ENST00000489954 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
XPO1-221ENST00000489954 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
XPO1-221ENST00000489954 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
XPO1-221ENST00000489954 POLA2Q14181 598 aa15.24■□□□□ 0.03
XPO1-221ENST00000489954 FOXD4L1Q9NU39 408 aa15.02■□□□□ -0
XPO1-221ENST00000489954 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
XPO1-221ENST00000489954 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
XPO1-221ENST00000489954 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
XPO1-221ENST00000489954 SP7Q8TDD2 431 aaPredicted RBP14.92□□□□□ -0.02
XPO1-221ENST00000489954 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
XPO1-221ENST00000489954 ZBTB22O15209 634 aa14.83□□□□□ -0.04
XPO1-221ENST00000489954 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
XPO1-221ENST00000489954 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
XPO1-221ENST00000489954 PIP4P2Q8N4L2 257 aa14.8□□□□□ -0.04
XPO1-221ENST00000489954 PITPNM1O00562 1244 aa14.7□□□□□ -0.06
XPO1-221ENST00000489954 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■□□□□ 10.2
XPO1-221ENST00000489954 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
XPO1-221ENST00000489954 HAX1O00165 279 aa14.61□□□□□ -0.07
XPO1-221ENST00000489954 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
XPO1-221ENST00000489954 SPDYE2BA6NHP3 402 aa14.44□□□□□ -0.1
XPO1-221ENST00000489954 SPDYE6P0CI01 402 aa14.44□□□□□ -0.1
XPO1-221ENST00000489954 EVX2Q03828 476 aa14.44□□□□□ -0.1
XPO1-221ENST00000489954 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
XPO1-221ENST00000489954 FBLN2P98095 1184 aa14.35□□□□□ -0.11
XPO1-221ENST00000489954 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
XPO1-221ENST00000489954 SPDYE1Q8NFV5 336 aaPredicted RBP14.27□□□□□ -0.13
XPO1-221ENST00000489954 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
XPO1-221ENST00000489954 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
XPO1-221ENST00000489954 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
XPO1-221ENST00000489954 C19orf67A6NJJ6 358 aa14.21□□□□□ -0.13
XPO1-221ENST00000489954 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
XPO1-221ENST00000489954 GABBR2O75899 941 aa14.08□□□□□ -0.16
XPO1-221ENST00000489954 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
XPO1-221ENST00000489954 LHX8Q68G74 356 aa13.96□□□□□ -0.17
XPO1-221ENST00000489954 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
XPO1-221ENST00000489954 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
XPO1-221ENST00000489954 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
XPO1-221ENST00000489954 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
XPO1-221ENST00000489954 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
XPO1-221ENST00000489954 CLCN6P51797 869 aa13.73□□□□□ -0.21
XPO1-221ENST00000489954 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
XPO1-221ENST00000489954 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
XPO1-221ENST00000489954 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
XPO1-221ENST00000489954 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
XPO1-221ENST00000489954 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
XPO1-221ENST00000489954 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
XPO1-221ENST00000489954 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
XPO1-221ENST00000489954 FKBP8Q14318 412 aa13.39□□□□□ -0.27
XPO1-221ENST00000489954 PLSCR2Q9NRY7 297 aa13.39□□□□□ -0.27
XPO1-221ENST00000489954 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
XPO1-221ENST00000489954 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
XPO1-221ENST00000489954 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
XPO1-221ENST00000489954 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
XPO1-221ENST00000489954 MNX1P50219 401 aaPredicted RBP13.28□□□□□ -0.28
XPO1-221ENST00000489954 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
XPO1-221ENST00000489954 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
XPO1-221ENST00000489954 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
XPO1-221ENST00000489954 POTEMA6NI47 508 aa13.18□□□□□ -0.3
XPO1-221ENST00000489954 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms