RNA–Protein interactions for RNA: ENST00000489095.1

TRBV5-2-201, Transcript of T cell receptor beta variable 5-2 (pseudogene), humanhuman

BASIC

Gene TRBV5-2, Length 273 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-2-201ENST00000489095 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
TRBV5-2-201ENST00000489095 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
TRBV5-2-201ENST00000489095 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
TRBV5-2-201ENST00000489095 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
TRBV5-2-201ENST00000489095 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.65
TRBV5-2-201ENST00000489095 DCAF1Q9Y4B6 1507 aa10.8□□□□□ -0.68
TRBV5-2-201ENST00000489095 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
TRBV5-2-201ENST00000489095 MYO15BQ96JP2 1530 aa10.6□□□□□ -0.71
TRBV5-2-201ENST00000489095 SENP3Q9H4L4 574 aaPredicted RBP10.52□□□□□ -0.73
TRBV5-2-201ENST00000489095 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
TRBV5-2-201ENST00000489095 NACADO15069 1562 aa10.43□□□□□ -0.74
TRBV5-2-201ENST00000489095 PHF23Q9BUL5 403 aaPredicted RBP10.42□□□□□ -0.74
TRBV5-2-201ENST00000489095 ABCC9O60706 1549 aa10.34□□□□□ -0.75
TRBV5-2-201ENST00000489095 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
TRBV5-2-201ENST00000489095 SCRIBQ14160 1630 aa10.33□□□□□ -0.76
TRBV5-2-201ENST00000489095 RB1CC1Q8TDY2 1594 aa10.28□□□□□ -0.76
TRBV5-2-201ENST00000489095 RSF1Q96T23 1441 aaPredicted RBP10.12□□□□□ -0.79
TRBV5-2-201ENST00000489095 UNC13AQ9UPW8 1703 aa10.06□□□□□ -0.8
TRBV5-2-201ENST00000489095 BAZ1AQ9NRL2 1556 aaPredicted RBP10.04□□□□□ -0.8
TRBV5-2-201ENST00000489095 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
TRBV5-2-201ENST00000489095 CECR2Q9BXF3 1484 aa9.99□□□□□ -0.81
TRBV5-2-201ENST00000489095 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
TRBV5-2-201ENST00000489095 WIZO95785 1651 aa9.93□□□□□ -0.82
TRBV5-2-201ENST00000489095 BICRAQ9NZM4 1560 aa9.92□□□□□ -0.82
TRBV5-2-201ENST00000489095 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
TRBV5-2-201ENST00000489095 FOXD1Q16676 465 aa9.88□□□□□ -0.83
TRBV5-2-201ENST00000489095 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
TRBV5-2-201ENST00000489095 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
TRBV5-2-201ENST00000489095 SMARCA2P51531 1590 aa9.78□□□□□ -0.84
TRBV5-2-201ENST00000489095 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
TRBV5-2-201ENST00000489095 CCDC88BA6NC98 1476 aa9.73□□□□□ -0.85
TRBV5-2-201ENST00000489095 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRBV5-2-201ENST00000489095 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
TRBV5-2-201ENST00000489095 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
TRBV5-2-201ENST00000489095 HMGXB3Q12766 1538 aa9.65□□□□□ -0.86
TRBV5-2-201ENST00000489095 EEA1Q15075 1411 aa9.6□□□□□ -0.87
TRBV5-2-201ENST00000489095 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
TRBV5-2-201ENST00000489095 ABCC8Q09428 1581 aa9.58□□□□□ -0.88
TRBV5-2-201ENST00000489095 NCAPD3P42695 1498 aa9.58□□□□□ -0.88
TRBV5-2-201ENST00000489095 WRNQ14191 1432 aaPredicted RBP eCLIP9.54□□□□□ -0.88
TRBV5-2-201ENST00000489095 FAM9AQ8IZU1 332 aaPredicted RBP9.5□□□□□ -0.89
TRBV5-2-201ENST00000489095 PRDM2Q13029 1718 aa9.5□□□□□ -0.89
TRBV5-2-201ENST00000489095 SYNJ1O43426 1573 aa9.49□□□□□ -0.89
TRBV5-2-201ENST00000489095 TOP2BQ02880 1626 aa9.48□□□□□ -0.89
TRBV5-2-201ENST00000489095 BIVM-ERCC5R4GMW8 1640 aa9.48□□□□□ -0.89
TRBV5-2-201ENST00000489095 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
TRBV5-2-201ENST00000489095 KIF21BO75037 1637 aa9.45□□□□□ -0.9
TRBV5-2-201ENST00000489095 CFTRP13569 1480 aa9.43□□□□□ -0.9
TRBV5-2-201ENST00000489095 GOLGA3Q08378 1498 aa9.43□□□□□ -0.9
TRBV5-2-201ENST00000489095 SOGA1O94964 1423 aa9.43□□□□□ -0.9
TRBV5-2-201ENST00000489095 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
TRBV5-2-201ENST00000489095 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
TRBV5-2-201ENST00000489095 TNIKQ9UKE5 1360 aa9.42□□□□□ -0.9
TRBV5-2-201ENST00000489095 HRCP23327 699 aa9.41□□□□□ -0.9
TRBV5-2-201ENST00000489095 CSRNP3Q8WYN3 585 aa9.4□□□□□ -0.9
TRBV5-2-201ENST00000489095 CC2D2AQ9P2K1 1620 aa9.39□□□□□ -0.91
TRBV5-2-201ENST00000489095 CEP162Q5TB80 1403 aa9.39□□□□□ -0.91
TRBV5-2-201ENST00000489095 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
TRBV5-2-201ENST00000489095 CUX1P39880 1505 aa9.35□□□□□ -0.91
TRBV5-2-201ENST00000489095 ERICH3Q5RHP9 1530 aa9.35□□□□□ -0.91
TRBV5-2-201ENST00000489095 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
TRBV5-2-201ENST00000489095 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
TRBV5-2-201ENST00000489095 KIF27Q86VH2 1401 aa9.3□□□□□ -0.92
TRBV5-2-201ENST00000489095 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
TRBV5-2-201ENST00000489095 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
TRBV5-2-201ENST00000489095 CLIP1P30622 1438 aa9.27□□□□□ -0.93
TRBV5-2-201ENST00000489095 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.93
TRBV5-2-201ENST00000489095 LAMC3Q9Y6N6 1575 aa9.26□□□□□ -0.93
TRBV5-2-201ENST00000489095 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
TRBV5-2-201ENST00000489095 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
TRBV5-2-201ENST00000489095 FANCD2Q9BXW9 1451 aa9.24□□□□□ -0.93
TRBV5-2-201ENST00000489095 VPS8Q8N3P4 1428 aa9.23□□□□□ -0.93
TRBV5-2-201ENST00000489095 PLPPR3Q6T4P5 718 aa9.22□□□□□ -0.93
TRBV5-2-201ENST00000489095 POTEDQ86YR6 584 aa9.22□□□□□ -0.93
TRBV5-2-201ENST00000489095 FGD5Q6ZNL6 1462 aa9.21□□□□□ -0.93
TRBV5-2-201ENST00000489095 MSH5O43196 834 aa9.2□□□□□ -0.94
TRBV5-2-201ENST00000489095 PIAS4Q8N2W9 510 aaPredicted RBP9.2□□□□□ -0.94
TRBV5-2-201ENST00000489095 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
TRBV5-2-201ENST00000489095 CUX2O14529 1486 aa9.19□□□□□ -0.94
TRBV5-2-201ENST00000489095 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
TRBV5-2-201ENST00000489095 ADRA2BP18089 450 aa9.17□□□□□ -0.94
TRBV5-2-201ENST00000489095 CUL7Q14999 1698 aa9.16□□□□□ -0.94
TRBV5-2-201ENST00000489095 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
TRBV5-2-201ENST00000489095 PDS5BQ9NTI5 1447 aa9.15□□□□□ -0.94
TRBV5-2-201ENST00000489095 WDR97A6NE52 1622 aa9.15□□□□□ -0.94
TRBV5-2-201ENST00000489095 POLA1P09884 1462 aaPredicted RBP9.14□□□□□ -0.95
TRBV5-2-201ENST00000489095 ARAP1Q96P48 1450 aa9.13□□□□□ -0.95
TRBV5-2-201ENST00000489095 NESP48681 1621 aa9.13□□□□□ -0.95
TRBV5-2-201ENST00000489095 IGF1RP08069 1367 aa9.12□□□□□ -0.95
TRBV5-2-201ENST00000489095 APLP2Q06481 763 aa9.12□□□□□ -0.95
TRBV5-2-201ENST00000489095 CARMIL1Q5VZK9 1371 aa9.11□□□□□ -0.95
TRBV5-2-201ENST00000489095 URB2Q14146 1524 aaKnown RBP9.1□□□□□ -0.95
TRBV5-2-201ENST00000489095 KIF21AQ7Z4S6 1674 aa9.1□□□□□ -0.95
TRBV5-2-201ENST00000489095 ABCA5Q8WWZ7 1642 aa9.09□□□□□ -0.95
TRBV5-2-201ENST00000489095 PPARGC1BQ86YN6 1023 aaKnown RBP9.09□□□□□ -0.95
TRBV5-2-201ENST00000489095 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
TRBV5-2-201ENST00000489095 CTTNBP2Q8WZ74 1663 aa9.08□□□□□ -0.96
TRBV5-2-201ENST00000489095 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
TRBV5-2-201ENST00000489095 MAP3K1Q13233 1512 aa9.08□□□□□ -0.96
TRBV5-2-201ENST00000489095 RAD54L2Q9Y4B4 1467 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms