RNA–Protein interactions for RNA: ENST00000488782.1

ACTR3B-205, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 5

Gene ACTR3B, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-205ENST00000488782 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
ACTR3B-205ENST00000488782 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
ACTR3B-205ENST00000488782 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
ACTR3B-205ENST00000488782 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
ACTR3B-205ENST00000488782 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
ACTR3B-205ENST00000488782 CCDC180Q9P1Z9 1646 aa12.96□□□□□ -0.33
ACTR3B-205ENST00000488782 FOXD1Q16676 465 aa12.81□□□□□ -0.36
ACTR3B-205ENST00000488782 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
ACTR3B-205ENST00000488782 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.41
ACTR3B-205ENST00000488782 DCAF1Q9Y4B6 1507 aa12.37□□□□□ -0.43
ACTR3B-205ENST00000488782 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.46
ACTR3B-205ENST00000488782 MSH5O43196 834 aa12.18□□□□□ -0.46
ACTR3B-205ENST00000488782 DCAF8L2P0C7V8 631 aa12.12□□□□□ -0.47
ACTR3B-205ENST00000488782 ABCC9O60706 1549 aa12.08□□□□□ -0.48
ACTR3B-205ENST00000488782 SHROOM4Q9ULL8 1493 aa12.07□□□□□ -0.48
ACTR3B-205ENST00000488782 NACADO15069 1562 aa12.05□□□□□ -0.48
ACTR3B-205ENST00000488782 RB1CC1Q8TDY2 1594 aa11.91□□□□□ -0.5
ACTR3B-205ENST00000488782 SCRIBQ14160 1630 aa11.85□□□□□ -0.51
ACTR3B-205ENST00000488782 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.53
ACTR3B-205ENST00000488782 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
ACTR3B-205ENST00000488782 UNC13AQ9UPW8 1703 aa11.61□□□□□ -0.55
ACTR3B-205ENST00000488782 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
ACTR3B-205ENST00000488782 RSF1Q96T23 1441 aaPredicted RBP11.55□□□□□ -0.56
ACTR3B-205ENST00000488782 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
ACTR3B-205ENST00000488782 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
ACTR3B-205ENST00000488782 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
ACTR3B-205ENST00000488782 MROH2BQ7Z745 1585 aa11.46□□□□□ -0.57
ACTR3B-205ENST00000488782 ADRA2BP18089 450 aa11.46□□□□□ -0.57
ACTR3B-205ENST00000488782 PLPPR3Q6T4P5 718 aa11.41□□□□□ -0.58
ACTR3B-205ENST00000488782 SMARCA4P51532 1647 aa11.41□□□□□ -0.58
ACTR3B-205ENST00000488782 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
ACTR3B-205ENST00000488782 WIZO95785 1651 aa11.35□□□□□ -0.59
ACTR3B-205ENST00000488782 PEG3Q9GZU2 1588 aa11.31□□□□□ -0.6
ACTR3B-205ENST00000488782 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
ACTR3B-205ENST00000488782 SMARCA2P51531 1590 aa11.23□□□□□ -0.61
ACTR3B-205ENST00000488782 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
ACTR3B-205ENST00000488782 EIF4G1Q04637 1599 aaKnown RBP11.16□□□□□ -0.62
ACTR3B-205ENST00000488782 CCDC88BA6NC98 1476 aa11.15□□□□□ -0.62
ACTR3B-205ENST00000488782 BAZ1BQ9UIG0 1483 aaKnown RBP11.13□□□□□ -0.63
ACTR3B-205ENST00000488782 HMGXB3Q12766 1538 aa11.12□□□□□ -0.63
ACTR3B-205ENST00000488782 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
ACTR3B-205ENST00000488782 TRIM41Q8WV44 630 aa11□□□□□ -0.65
ACTR3B-205ENST00000488782 CC2D2AQ9P2K1 1620 aa10.97□□□□□ -0.65
ACTR3B-205ENST00000488782 ABCC8Q09428 1581 aa10.9□□□□□ -0.67
ACTR3B-205ENST00000488782 CFTRP13569 1480 aa10.88□□□□□ -0.67
ACTR3B-205ENST00000488782 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.67
ACTR3B-205ENST00000488782 EEA1Q15075 1411 aa10.83□□□□□ -0.68
ACTR3B-205ENST00000488782 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
ACTR3B-205ENST00000488782 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
ACTR3B-205ENST00000488782 SYNJ1O43426 1573 aa10.8□□□□□ -0.68
ACTR3B-205ENST00000488782 TOP2BQ02880 1626 aa10.79□□□□□ -0.68
ACTR3B-205ENST00000488782 BIVM-ERCC5R4GMW8 1640 aa10.78□□□□□ -0.68
ACTR3B-205ENST00000488782 LOC105371045A0A1W2PR82 267 aa10.78□□□□□ -0.68
ACTR3B-205ENST00000488782 DMRT2Q9Y5R5 561 aa10.78□□□□□ -0.68
ACTR3B-205ENST00000488782 FAM9AQ8IZU1 332 aaPredicted RBP10.73□□□□□ -0.69
ACTR3B-205ENST00000488782 CUX1P39880 1505 aa10.73□□□□□ -0.69
ACTR3B-205ENST00000488782 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
ACTR3B-205ENST00000488782 SOGA1O94964 1423 aa10.72□□□□□ -0.69
ACTR3B-205ENST00000488782 LAMC3Q9Y6N6 1575 aa10.72□□□□□ -0.69
ACTR3B-205ENST00000488782 MAPK8IP2Q13387 824 aaPredicted RBP10.7□□□□□ -0.7
ACTR3B-205ENST00000488782 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
ACTR3B-205ENST00000488782 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
ACTR3B-205ENST00000488782 RUSC2Q8N2Y8 1516 aa10.66□□□□□ -0.7
ACTR3B-205ENST00000488782 KIF21BO75037 1637 aa10.64□□□□□ -0.71
ACTR3B-205ENST00000488782 CEP164Q9UPV0 1460 aa10.63□□□□□ -0.71
ACTR3B-205ENST00000488782 NESP48681 1621 aa10.63□□□□□ -0.71
ACTR3B-205ENST00000488782 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
ACTR3B-205ENST00000488782 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
ACTR3B-205ENST00000488782 DNMBPQ6XZF7 1577 aa10.62□□□□□ -0.71
ACTR3B-205ENST00000488782 TNIKQ9UKE5 1360 aa10.62□□□□□ -0.71
ACTR3B-205ENST00000488782 KIF27Q86VH2 1401 aa10.6□□□□□ -0.71
ACTR3B-205ENST00000488782 DNAJC5BQ9UF47 199 aa10.6□□□□□ -0.71
ACTR3B-205ENST00000488782 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
ACTR3B-205ENST00000488782 TOPBP1Q92547 1522 aa10.58□□□□□ -0.72
ACTR3B-205ENST00000488782 ERICH3Q5RHP9 1530 aa10.57□□□□□ -0.72
ACTR3B-205ENST00000488782 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
ACTR3B-205ENST00000488782 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
ACTR3B-205ENST00000488782 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
ACTR3B-205ENST00000488782 POLA1P09884 1462 aaPredicted RBP10.54□□□□□ -0.72
ACTR3B-205ENST00000488782 ABCA10Q8WWZ4 1543 aa10.53□□□□□ -0.72
ACTR3B-205ENST00000488782 CUX2O14529 1486 aa10.53□□□□□ -0.72
ACTR3B-205ENST00000488782 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
ACTR3B-205ENST00000488782 RAPGEF2Q9Y4G8 1499 aa10.52□□□□□ -0.73
ACTR3B-205ENST00000488782 KIF21AQ7Z4S6 1674 aa10.52□□□□□ -0.73
ACTR3B-205ENST00000488782 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
ACTR3B-205ENST00000488782 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
ACTR3B-205ENST00000488782 IGF1RP08069 1367 aa10.49□□□□□ -0.73
ACTR3B-205ENST00000488782 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
ACTR3B-205ENST00000488782 WDR97A6NE52 1622 aa10.47□□□□□ -0.73
ACTR3B-205ENST00000488782 RAD54L2Q9Y4B4 1467 aa10.46□□□□□ -0.74
ACTR3B-205ENST00000488782 CLIP1P30622 1438 aa10.44□□□□□ -0.74
ACTR3B-205ENST00000488782 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
ACTR3B-205ENST00000488782 CUL7Q14999 1698 aa10.43□□□□□ -0.74
ACTR3B-205ENST00000488782 ABCA5Q8WWZ7 1642 aa10.43□□□□□ -0.74
ACTR3B-205ENST00000488782 WDR62O43379 1518 aa10.43□□□□□ -0.74
ACTR3B-205ENST00000488782 TRIM26Q12899 539 aaPredicted RBP10.42□□□□□ -0.74
ACTR3B-205ENST00000488782 TARBP1Q13395 1621 aaKnown RBP10.42□□□□□ -0.74
ACTR3B-205ENST00000488782 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
ACTR3B-205ENST00000488782 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
ACTR3B-205ENST00000488782 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms