RNA–Protein interactions for RNA: ENST00000488444.6

KCNT1-208, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-208ENST00000488444 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
KCNT1-208ENST00000488444 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
KCNT1-208ENST00000488444 SHROOM4Q9ULL8 1493 aa26.31■■□□□ 1.8
KCNT1-208ENST00000488444 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
KCNT1-208ENST00000488444 EHMT2Q96KQ7 1210 aa25.1■■□□□ 1.61
KCNT1-208ENST00000488444 PCGF6Q9BYE7 350 aa24.82■■□□□ 1.56
KCNT1-208ENST00000488444 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
KCNT1-208ENST00000488444 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
KCNT1-208ENST00000488444 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
KCNT1-208ENST00000488444 PPARGC1BQ86YN6 1023 aaKnown RBP24.27■■□□□ 1.48
KCNT1-208ENST00000488444 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
KCNT1-208ENST00000488444 HRCP23327 699 aa24.02■■□□□ 1.44
KCNT1-208ENST00000488444 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
KCNT1-208ENST00000488444 MYO15BQ96JP2 1530 aa23.69■■□□□ 1.38
KCNT1-208ENST00000488444 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
KCNT1-208ENST00000488444 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
KCNT1-208ENST00000488444 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
KCNT1-208ENST00000488444 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
KCNT1-208ENST00000488444 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
KCNT1-208ENST00000488444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
KCNT1-208ENST00000488444 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
KCNT1-208ENST00000488444 ABCC9O60706 1549 aa23.09■■□□□ 1.29
KCNT1-208ENST00000488444 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
KCNT1-208ENST00000488444 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
KCNT1-208ENST00000488444 APLP2Q06481 763 aa22.87■■□□□ 1.25
KCNT1-208ENST00000488444 HNRNPUL2Q1KMD3 747 aaKnown RBP22.86■■□□□ 1.25
KCNT1-208ENST00000488444 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
KCNT1-208ENST00000488444 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
KCNT1-208ENST00000488444 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
KCNT1-208ENST00000488444 ITGAEP38570 1179 aa22.62■■□□□ 1.21
KCNT1-208ENST00000488444 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
KCNT1-208ENST00000488444 DIEXFQ68CQ4 756 aaKnown RBP22.6■■□□□ 1.21
KCNT1-208ENST00000488444 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
KCNT1-208ENST00000488444 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
KCNT1-208ENST00000488444 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
KCNT1-208ENST00000488444 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
KCNT1-208ENST00000488444 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
KCNT1-208ENST00000488444 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
KCNT1-208ENST00000488444 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
KCNT1-208ENST00000488444 CSRNP3Q8WYN3 585 aa22.26■■□□□ 1.15
KCNT1-208ENST00000488444 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
KCNT1-208ENST00000488444 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.14
KCNT1-208ENST00000488444 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.12
KCNT1-208ENST00000488444 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
KCNT1-208ENST00000488444 CNGB1Q14028 1251 aaPredicted RBP21.98■■□□□ 1.11
KCNT1-208ENST00000488444 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
KCNT1-208ENST00000488444 MIER1Q8N108 512 aa21.96■■□□□ 1.11
KCNT1-208ENST00000488444 SOGA1O94964 1423 aa21.96■■□□□ 1.11
KCNT1-208ENST00000488444 BCANQ96GW7 911 aa21.93■■□□□ 1.1
KCNT1-208ENST00000488444 ABCC8Q09428 1581 aa21.92■■□□□ 1.1
KCNT1-208ENST00000488444 CEP162Q5TB80 1403 aa21.92■■□□□ 1.1
KCNT1-208ENST00000488444 FAM50AQ14320 339 aaKnown RBP21.88■■□□□ 1.09
KCNT1-208ENST00000488444 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
KCNT1-208ENST00000488444 WIZO95785 1651 aa21.84■■□□□ 1.09
KCNT1-208ENST00000488444 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
KCNT1-208ENST00000488444 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
KCNT1-208ENST00000488444 NACADO15069 1562 aa21.71■■□□□ 1.07
KCNT1-208ENST00000488444 ARID3CA6NKF2 412 aa21.7■■□□□ 1.07
KCNT1-208ENST00000488444 CLIP1P30622 1438 aa21.66■■□□□ 1.06
KCNT1-208ENST00000488444 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
KCNT1-208ENST00000488444 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
KCNT1-208ENST00000488444 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
KCNT1-208ENST00000488444 NEFLP07196 543 aa21.56■■□□□ 1.04
KCNT1-208ENST00000488444 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
KCNT1-208ENST00000488444 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
KCNT1-208ENST00000488444 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
KCNT1-208ENST00000488444 KANK4Q5T7N3 995 aaPredicted RBP21.48■■□□□ 1.03
KCNT1-208ENST00000488444 TRIM52Q96A61 297 aa21.44■■□□□ 1.02
KCNT1-208ENST00000488444 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
KCNT1-208ENST00000488444 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
KCNT1-208ENST00000488444 FKBP8Q14318 412 aa21.33■■□□□ 1.01
KCNT1-208ENST00000488444 CHIC2Q9UKJ5 165 aa21.3■■□□□ 1
KCNT1-208ENST00000488444 KCNH8Q96L42 1107 aa21.3■■□□□ 1
KCNT1-208ENST00000488444 ERICH6Q7L0X2 663 aa21.29■■□□□ 1
KCNT1-208ENST00000488444 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
KCNT1-208ENST00000488444 IRX6P78412 446 aaPredicted RBP21.27■■□□□ 1
KCNT1-208ENST00000488444 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
KCNT1-208ENST00000488444 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
KCNT1-208ENST00000488444 EEA1Q15075 1411 aa21.25■□□□□ 0.99
KCNT1-208ENST00000488444 RAPGEF2Q9Y4G8 1499 aa21.24■□□□□ 0.99
KCNT1-208ENST00000488444 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
KCNT1-208ENST00000488444 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
KCNT1-208ENST00000488444 ANP32CO43423 234 aa21.23■□□□□ 0.99
KCNT1-208ENST00000488444 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
KCNT1-208ENST00000488444 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
KCNT1-208ENST00000488444 SMARCA2P51531 1590 aa21.18■□□□□ 0.98
KCNT1-208ENST00000488444 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
KCNT1-208ENST00000488444 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
KCNT1-208ENST00000488444 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
KCNT1-208ENST00000488444 HNRNPUQ00839 825 aaKnown RBP eCLIP21.08■□□□□ 0.97
KCNT1-208ENST00000488444 FBLN2P98095 1184 aa21.08■□□□□ 0.96
KCNT1-208ENST00000488444 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
KCNT1-208ENST00000488444 TONSLQ96HA7 1378 aa21.02■□□□□ 0.96
KCNT1-208ENST00000488444 ZNF777Q9ULD5 760 aaPredicted RBP21.01■□□□□ 0.95
KCNT1-208ENST00000488444 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
KCNT1-208ENST00000488444 MYT1Q01538 1121 aa20.99■□□□□ 0.95
KCNT1-208ENST00000488444 KIF27Q86VH2 1401 aa20.98■□□□□ 0.95
KCNT1-208ENST00000488444 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
KCNT1-208ENST00000488444 DHX57Q6P158 1386 aaKnown RBP20.95■□□□□ 0.94
KCNT1-208ENST00000488444 SALL2Q9Y467 1007 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms