RNA–Protein interactions for RNA: ENST00000488234.1

SUCLG1-207, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 3

Gene SUCLG1, Length 275 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-207ENST00000488234 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
SUCLG1-207ENST00000488234 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
SUCLG1-207ENST00000488234 SENP3Q9H4L4 574 aaPredicted RBP20.13■□□□□ 0.81
SUCLG1-207ENST00000488234 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
SUCLG1-207ENST00000488234 FOXD1Q16676 465 aa18.8■□□□□ 0.6
SUCLG1-207ENST00000488234 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
SUCLG1-207ENST00000488234 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
SUCLG1-207ENST00000488234 ADRA2BP18089 450 aa17.59■□□□□ 0.41
SUCLG1-207ENST00000488234 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
SUCLG1-207ENST00000488234 MSH5O43196 834 aa17.5■□□□□ 0.39
SUCLG1-207ENST00000488234 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
SUCLG1-207ENST00000488234 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
SUCLG1-207ENST00000488234 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
SUCLG1-207ENST00000488234 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
SUCLG1-207ENST00000488234 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
SUCLG1-207ENST00000488234 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
SUCLG1-207ENST00000488234 HOXD11P31277 338 aaPredicted RBP15.48■□□□□ 0.07
SUCLG1-207ENST00000488234 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
SUCLG1-207ENST00000488234 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
SUCLG1-207ENST00000488234 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
SUCLG1-207ENST00000488234 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
SUCLG1-207ENST00000488234 RNF39Q9H2S5 420 aa14.99□□□□□ -0.01
SUCLG1-207ENST00000488234 CACNB1Q02641 598 aaPredicted RBP14.94□□□□□ -0.02
SUCLG1-207ENST00000488234 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
SUCLG1-207ENST00000488234 KCNA4P22459 653 aa14.85□□□□□ -0.03
SUCLG1-207ENST00000488234 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
SUCLG1-207ENST00000488234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
SUCLG1-207ENST00000488234 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
SUCLG1-207ENST00000488234 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
SUCLG1-207ENST00000488234 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
SUCLG1-207ENST00000488234 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
SUCLG1-207ENST00000488234 CAPN15O75808 1086 aa14.09□□□□□ -0.15
SUCLG1-207ENST00000488234 DSG3P32926 999 aa14.07□□□□□ -0.16
SUCLG1-207ENST00000488234 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
SUCLG1-207ENST00000488234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
SUCLG1-207ENST00000488234 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
SUCLG1-207ENST00000488234 APLP2Q06481 763 aa13.94□□□□□ -0.18
SUCLG1-207ENST00000488234 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
SUCLG1-207ENST00000488234 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
SUCLG1-207ENST00000488234 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
SUCLG1-207ENST00000488234 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
SUCLG1-207ENST00000488234 ABCB7O75027 752 aa13.79□□□□□ -0.2
SUCLG1-207ENST00000488234 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
SUCLG1-207ENST00000488234 ZBTB22O15209 634 aa13.69□□□□□ -0.22
SUCLG1-207ENST00000488234 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
SUCLG1-207ENST00000488234 POLA2Q14181 598 aa13.58□□□□□ -0.24
SUCLG1-207ENST00000488234 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
SUCLG1-207ENST00000488234 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
SUCLG1-207ENST00000488234 ABCC9O60706 1549 aa13.34□□□□□ -0.27
SUCLG1-207ENST00000488234 POTEHQ6S545 545 aa13.29□□□□□ -0.28
SUCLG1-207ENST00000488234 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
SUCLG1-207ENST00000488234 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
SUCLG1-207ENST00000488234 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
SUCLG1-207ENST00000488234 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
SUCLG1-207ENST00000488234 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
SUCLG1-207ENST00000488234 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
SUCLG1-207ENST00000488234 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
SUCLG1-207ENST00000488234 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
SUCLG1-207ENST00000488234 FBLN2P98095 1184 aa12.98□□□□□ -0.33
SUCLG1-207ENST00000488234 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
SUCLG1-207ENST00000488234 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
SUCLG1-207ENST00000488234 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
SUCLG1-207ENST00000488234 CCDC180Q9P1Z9 1646 aa12.91□□□□□ -0.34
SUCLG1-207ENST00000488234 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
SUCLG1-207ENST00000488234 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
SUCLG1-207ENST00000488234 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
SUCLG1-207ENST00000488234 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.37
SUCLG1-207ENST00000488234 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
SUCLG1-207ENST00000488234 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
SUCLG1-207ENST00000488234 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
SUCLG1-207ENST00000488234 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
SUCLG1-207ENST00000488234 RB1CC1Q8TDY2 1594 aa12.53□□□□□ -0.4
SUCLG1-207ENST00000488234 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
SUCLG1-207ENST00000488234 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
SUCLG1-207ENST00000488234 HAX1O00165 279 aa12.47□□□□□ -0.41
SUCLG1-207ENST00000488234 EVX2Q03828 476 aa12.42□□□□□ -0.42
SUCLG1-207ENST00000488234 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
SUCLG1-207ENST00000488234 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
SUCLG1-207ENST00000488234 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
SUCLG1-207ENST00000488234 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
SUCLG1-207ENST00000488234 NACADO15069 1562 aa12.32□□□□□ -0.44
SUCLG1-207ENST00000488234 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
SUCLG1-207ENST00000488234 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
SUCLG1-207ENST00000488234 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
SUCLG1-207ENST00000488234 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
SUCLG1-207ENST00000488234 PROM2Q8N271 834 aa12.18□□□□□ -0.46
SUCLG1-207ENST00000488234 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
SUCLG1-207ENST00000488234 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
SUCLG1-207ENST00000488234 GABBR2O75899 941 aa12.1□□□□□ -0.47
SUCLG1-207ENST00000488234 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
SUCLG1-207ENST00000488234 CECR2Q9BXF3 1484 aa12.07□□□□□ -0.48
SUCLG1-207ENST00000488234 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
SUCLG1-207ENST00000488234 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
SUCLG1-207ENST00000488234 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
SUCLG1-207ENST00000488234 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.5
SUCLG1-207ENST00000488234 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
SUCLG1-207ENST00000488234 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
SUCLG1-207ENST00000488234 CLCN6P51797 869 aa11.93□□□□□ -0.5
SUCLG1-207ENST00000488234 FKBP8Q14318 412 aa11.93□□□□□ -0.5
SUCLG1-207ENST00000488234 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms